Chelonobacter oris

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Chelonobacter

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2284 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A3B8I1|A0A0A3B8I1_9PAST Uncharacterized protein OS=Chelonobacter oris OX=505317 GN=OA57_09770 PE=4 SV=1
MM1 pKa = 7.65AIVGLFYY8 pKa = 11.01GSDD11 pKa = 3.2TGNTEE16 pKa = 4.47NIAKK20 pKa = 9.27MIQKK24 pKa = 10.41KK25 pKa = 10.63LGDD28 pKa = 3.9NVVDD32 pKa = 3.46IRR34 pKa = 11.84DD35 pKa = 3.38IAKK38 pKa = 10.28SSKK41 pKa = 10.26EE42 pKa = 4.2DD43 pKa = 2.92ISAYY47 pKa = 10.64DD48 pKa = 4.34FILIGIPTWYY58 pKa = 10.23YY59 pKa = 11.56GEE61 pKa = 4.97AQADD65 pKa = 3.42WDD67 pKa = 4.41DD68 pKa = 4.28FFPTLEE74 pKa = 4.91EE75 pKa = 4.09IDD77 pKa = 3.96FTDD80 pKa = 4.3KK81 pKa = 10.68IVGIFGCGDD90 pKa = 3.21QEE92 pKa = 5.04DD93 pKa = 4.3YY94 pKa = 11.79AEE96 pKa = 4.32YY97 pKa = 10.5FCDD100 pKa = 4.34AMGTVRR106 pKa = 11.84NIIEE110 pKa = 4.05PHH112 pKa = 5.94GATIVGHH119 pKa = 6.62WPTEE123 pKa = 4.28GYY125 pKa = 10.5SFEE128 pKa = 4.48ASQALVDD135 pKa = 3.95GNTFVGLCIDD145 pKa = 4.19EE146 pKa = 4.82DD147 pKa = 3.9RR148 pKa = 11.84QPEE151 pKa = 4.27LTEE154 pKa = 3.79QRR156 pKa = 11.84VSAWVKK162 pKa = 9.65QIYY165 pKa = 10.52DD166 pKa = 3.59EE167 pKa = 4.62MYY169 pKa = 10.46LAEE172 pKa = 4.58LVV174 pKa = 3.53

Molecular weight: 19.58 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A3ANE3|A0A0A3ANE3_9PAST Transcriptional regulator OS=Chelonobacter oris OX=505317 GN=OA57_03595 PE=4 SV=1
MM1 pKa = 7.74RR2 pKa = 11.84GNWLIQSLMVACTFLVALVMEE23 pKa = 4.48ITPWSSEE30 pKa = 3.81FQGFRR35 pKa = 11.84PSWLVLVLLYY45 pKa = 9.88WVLAIPNKK53 pKa = 10.12ISIGWAFVVGLIWDD67 pKa = 4.59LSLGSILGVHH77 pKa = 6.72ALVLSLFAYY86 pKa = 10.33LIASNHH92 pKa = 4.95LVLRR96 pKa = 11.84NLSLWLQSILVIVSVVTIHH115 pKa = 7.37IIIFLIEE122 pKa = 4.44LFMHH126 pKa = 6.19SARR129 pKa = 11.84FNSQEE134 pKa = 4.2LIGAVISGVLWPWVFLLLRR153 pKa = 11.84TLRR156 pKa = 11.84RR157 pKa = 11.84KK158 pKa = 9.45FHH160 pKa = 6.25LRR162 pKa = 3.21

Molecular weight: 18.55 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2284

0

2284

744759

32

2505

326.1

36.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.223 ± 0.061

1.046 ± 0.02

5.118 ± 0.04

5.626 ± 0.049

4.243 ± 0.041

7.095 ± 0.056

2.173 ± 0.022

6.809 ± 0.05

5.164 ± 0.039

10.91 ± 0.076

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.407 ± 0.026

4.423 ± 0.043

3.908 ± 0.032

5.09 ± 0.054

4.863 ± 0.041

5.847 ± 0.042

5.016 ± 0.039

6.66 ± 0.042

1.201 ± 0.019

3.177 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski