Avian metaavulavirus 20

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z4NB37|A0A2Z4NB37_9MONO Isoform of A0A2I6ECF1 W protein OS=Avian metaavulavirus 20 OX=2560314 GN=P PE=4 SV=1
MM1 pKa = 7.95DD2 pKa = 5.31FSNDD6 pKa = 3.27DD7 pKa = 5.08DD8 pKa = 3.8IAEE11 pKa = 4.39LLNVSSQVIRR21 pKa = 11.84EE22 pKa = 4.03IQHH25 pKa = 6.83AEE27 pKa = 3.91GKK29 pKa = 9.6PPQTVGSVKK38 pKa = 10.17VSPGNTKK45 pKa = 8.59TLTEE49 pKa = 4.04LWEE52 pKa = 4.5SEE54 pKa = 3.99ASQSQAAGPSDD65 pKa = 3.49KK66 pKa = 11.26SSGEE70 pKa = 4.08SSNQPNPPQTNQTHH84 pKa = 5.64NEE86 pKa = 3.86EE87 pKa = 4.74DD88 pKa = 3.74SAEE91 pKa = 4.34LDD93 pKa = 3.8TITAATTTCNDD104 pKa = 3.71NEE106 pKa = 4.49DD107 pKa = 3.8TTQQSSQGIKK117 pKa = 10.84SNMGKK122 pKa = 9.99DD123 pKa = 3.62LDD125 pKa = 3.92SALAKK130 pKa = 10.38LEE132 pKa = 4.22KK133 pKa = 10.02KK134 pKa = 10.03AASIKK139 pKa = 10.19SDD141 pKa = 3.27KK142 pKa = 10.54QVLKK146 pKa = 10.76GGEE149 pKa = 4.03KK150 pKa = 10.2RR151 pKa = 11.84STANLGIPLFRR162 pKa = 11.84EE163 pKa = 4.38DD164 pKa = 3.28QQ165 pKa = 3.53

Molecular weight: 17.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2I6ECF5|A0A2I6ECF5_9MONO Fusion glycoprotein F0 OS=Avian metaavulavirus 20 OX=2560314 GN=F PE=3 SV=2
MM1 pKa = 7.44ATTTLQLYY9 pKa = 10.28LDD11 pKa = 3.65QADD14 pKa = 4.17RR15 pKa = 11.84GLEE18 pKa = 3.91LLSFPLIVIQTSTGSKK34 pKa = 9.91EE35 pKa = 4.11LQQQMRR41 pKa = 11.84IDD43 pKa = 3.93NVGEE47 pKa = 3.87TSGEE51 pKa = 3.83KK52 pKa = 10.94GEE54 pKa = 4.52TIFINLYY61 pKa = 10.89GFIKK65 pKa = 10.3SQGVKK70 pKa = 10.01EE71 pKa = 4.26SSTEE75 pKa = 3.84FLSVNSVQPKK85 pKa = 8.92DD86 pKa = 3.52TITAGMVVLGATRR99 pKa = 11.84MSSDD103 pKa = 3.42YY104 pKa = 11.25SAIAADD110 pKa = 4.31ALSLSITIKK119 pKa = 10.56KK120 pKa = 9.74SALAQEE126 pKa = 4.9KK127 pKa = 10.08IAVSIHH133 pKa = 5.74NSPYY137 pKa = 10.26SLSGALAVRR146 pKa = 11.84SGGFIASAEE155 pKa = 4.09EE156 pKa = 4.22TIKK159 pKa = 10.9CSSKK163 pKa = 9.88IQAGVYY169 pKa = 7.24YY170 pKa = 8.74TFKK173 pKa = 10.84PMFVSITRR181 pKa = 11.84LNNGKK186 pKa = 10.26LYY188 pKa = 10.15RR189 pKa = 11.84VPKK192 pKa = 10.46AMHH195 pKa = 7.11TINSDD200 pKa = 2.87IFFKK204 pKa = 11.07VQLEE208 pKa = 4.45VEE210 pKa = 4.78FKK212 pKa = 11.03LGIKK216 pKa = 9.73SDD218 pKa = 3.61HH219 pKa = 6.73PQAKK223 pKa = 8.67MLKK226 pKa = 9.65KK227 pKa = 10.61VEE229 pKa = 3.99IDD231 pKa = 3.42GKK233 pKa = 9.8PEE235 pKa = 3.61YY236 pKa = 10.09FGYY239 pKa = 10.58CWFHH243 pKa = 6.12LCNFKK248 pKa = 9.72RR249 pKa = 11.84TNARR253 pKa = 11.84GEE255 pKa = 4.22SRR257 pKa = 11.84SLEE260 pKa = 4.3AIKK263 pKa = 10.93DD264 pKa = 3.73KK265 pKa = 10.35VRR267 pKa = 11.84KK268 pKa = 8.38MGLKK272 pKa = 10.04ISIHH276 pKa = 6.03DD277 pKa = 3.57LWGPTIIVQITGKK290 pKa = 9.54SSKK293 pKa = 9.55YY294 pKa = 9.19AQGFFSTRR302 pKa = 11.84GTCCLPVSKK311 pKa = 10.77SNPEE315 pKa = 3.72LAKK318 pKa = 11.06LMWSCDD324 pKa = 3.8TKK326 pKa = 10.59IHH328 pKa = 5.89SALVIVQAGDD338 pKa = 3.01KK339 pKa = 10.66SKK341 pKa = 10.92LIKK344 pKa = 10.67SEE346 pKa = 4.63DD347 pKa = 3.54IEE349 pKa = 4.2ISGAVVASSSGLPKK363 pKa = 10.76YY364 pKa = 10.91NLFKK368 pKa = 10.71KK369 pKa = 10.36GQVKK373 pKa = 10.32GSKK376 pKa = 9.76

Molecular weight: 41.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

2

8

5047

165

2242

630.9

70.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.34 ± 0.946

2.12 ± 0.253

4.835 ± 0.306

5.251 ± 0.433

3.547 ± 0.538

5.33 ± 0.44

2.12 ± 0.342

7.291 ± 0.845

5.409 ± 0.469

10.462 ± 1.035

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.358 ± 0.249

4.874 ± 0.336

3.943 ± 0.357

5.053 ± 0.402

4.181 ± 0.382

10.402 ± 0.636

6.638 ± 0.391

6.004 ± 0.275

1.129 ± 0.114

2.714 ± 0.326
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski