Dialister sp. CAG:588

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Negativicutes; Veillonellales; Veillonellaceae; Dialister; environmental samples

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1171 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R7PN08|R7PN08_9FIRM Transcription termination/antitermination protein NusG OS=Dialister sp. CAG:588 OX=1262871 GN=nusG PE=3 SV=1
MM1 pKa = 7.48NPTLFFSLSVDD12 pKa = 5.08FIPDD16 pKa = 3.47MQDD19 pKa = 2.59GRR21 pKa = 11.84QSFIEE26 pKa = 4.07KK27 pKa = 9.39MKK29 pKa = 9.79EE30 pKa = 3.65TATLYY35 pKa = 10.11QSPFSFDD42 pKa = 3.16AKK44 pKa = 10.57DD45 pKa = 3.13RR46 pKa = 11.84PTIEE50 pKa = 5.3KK51 pKa = 8.52ITSANLLKK59 pKa = 10.37ILPTLDD65 pKa = 3.71LSAFGTWPSCILTCTIQSNHH85 pKa = 4.65TVYY88 pKa = 10.8SIGMSDD94 pKa = 2.98GWDD97 pKa = 2.82IYY99 pKa = 10.74IGNKK103 pKa = 9.74NFFAFAQFPADD114 pKa = 3.17ALQIMEE120 pKa = 4.76EE121 pKa = 3.96ACLYY125 pKa = 9.93YY126 pKa = 10.17INNTEE131 pKa = 3.93NQSFQEE137 pKa = 4.28FVAQIGFDD145 pKa = 3.78SFRR148 pKa = 11.84DD149 pKa = 3.96TILGNINPSTNAQSMHH165 pKa = 6.54IDD167 pKa = 3.18NPAFNLKK174 pKa = 10.25EE175 pKa = 3.93GDD177 pKa = 3.84FVRR180 pKa = 11.84PEE182 pKa = 3.97HH183 pKa = 7.01NIMQIIDD190 pKa = 4.39VYY192 pKa = 11.16PDD194 pKa = 3.2MAPFLMEE201 pKa = 3.98YY202 pKa = 11.0GMSCVGCFISYY213 pKa = 10.36EE214 pKa = 4.04EE215 pKa = 4.57NLWQGAQSHH224 pKa = 6.07GLDD227 pKa = 3.18VFEE230 pKa = 5.78ILGEE234 pKa = 4.07MNEE237 pKa = 4.4YY238 pKa = 10.29IADD241 pKa = 3.91KK242 pKa = 10.64YY243 pKa = 9.38NKK245 pKa = 9.72KK246 pKa = 10.39VISKK250 pKa = 6.89EE251 pKa = 4.14TPMEE255 pKa = 4.83DD256 pKa = 4.08IITLYY261 pKa = 10.04PQLLGILQSFHH272 pKa = 8.71LEE274 pKa = 4.14MPADD278 pKa = 3.67MQTPLGAICNKK289 pKa = 10.43ANVNVNDD296 pKa = 4.69VINACDD302 pKa = 3.54DD303 pKa = 3.52KK304 pKa = 11.56LRR306 pKa = 11.84GVSEE310 pKa = 4.02II311 pKa = 4.08

Molecular weight: 35.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R7PRL9|R7PRL9_9FIRM 50S ribosomal protein L23 OS=Dialister sp. CAG:588 OX=1262871 GN=rplW PE=3 SV=1
MM1 pKa = 7.75AKK3 pKa = 10.54GKK5 pKa = 7.67MTYY8 pKa = 9.74QPNNLWRR15 pKa = 11.84KK16 pKa = 6.7RR17 pKa = 11.84THH19 pKa = 6.17GFRR22 pKa = 11.84ARR24 pKa = 11.84MKK26 pKa = 8.69TRR28 pKa = 11.84AGRR31 pKa = 11.84IVLKK35 pKa = 10.39RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84AKK40 pKa = 9.89GRR42 pKa = 11.84KK43 pKa = 8.67VLSAA47 pKa = 4.05

Molecular weight: 5.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1171

0

1171

338624

29

1455

289.2

32.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.329 ± 0.094

1.214 ± 0.027

4.991 ± 0.06

6.912 ± 0.076

4.069 ± 0.052

6.976 ± 0.071

2.134 ± 0.036

8.489 ± 0.075

7.118 ± 0.062

9.223 ± 0.071

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.033 ± 0.03

4.388 ± 0.054

3.341 ± 0.04

3.332 ± 0.039

4.287 ± 0.055

6.085 ± 0.057

5.503 ± 0.047

6.925 ± 0.053

0.965 ± 0.027

3.68 ± 0.05
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski