Coniochaeta pulveracea

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Sordariomycetidae; Coniochaetales; Coniochaetaceae; Coniochaeta

Average proteome isoelectric point is 6.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10012 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A420Y1Z3|A0A420Y1Z3_9PEZI Sec39 domain-containing protein OS=Coniochaeta pulveracea OX=177199 GN=DL546_003458 PE=4 SV=1
MM1 pKa = 7.44IPAPYY6 pKa = 9.58SASDD10 pKa = 3.43TNPWLVAKK18 pKa = 10.17RR19 pKa = 11.84LPFADD24 pKa = 5.64HH25 pKa = 7.28IICLDD30 pKa = 3.57ASDD33 pKa = 4.79KK34 pKa = 10.19VTAQGTFSDD43 pKa = 4.43LSTAGGYY50 pKa = 8.43VASFSLPGADD60 pKa = 2.31WTYY63 pKa = 10.57ATNNGSDD70 pKa = 4.09DD71 pKa = 4.5DD72 pKa = 5.93DD73 pKa = 6.0NITDD77 pKa = 3.71ADD79 pKa = 3.69QYY81 pKa = 11.71GDD83 pKa = 3.58VLAGNKK89 pKa = 9.13TSDD92 pKa = 3.86DD93 pKa = 3.93MLDD96 pKa = 3.48ASQTSSSSITSKK108 pKa = 10.94GSTINLEE115 pKa = 4.16EE116 pKa = 3.92VSGSNRR122 pKa = 11.84QAGDD126 pKa = 3.45LQIYY130 pKa = 8.76LYY132 pKa = 10.71YY133 pKa = 9.3MRR135 pKa = 11.84SVGWWTSMTFTVAITAFVFCISFPSKK161 pKa = 10.87

Molecular weight: 17.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A420YCU6|A0A420YCU6_9PEZI AP complex subunit sigma OS=Coniochaeta pulveracea OX=177199 GN=VAS2 PE=3 SV=1
MM1 pKa = 7.74AHH3 pKa = 6.38RR4 pKa = 11.84QSTTTTTTTTSTVPSKK20 pKa = 11.02RR21 pKa = 11.84NLFGRR26 pKa = 11.84RR27 pKa = 11.84DD28 pKa = 3.26RR29 pKa = 11.84AAHH32 pKa = 5.83HH33 pKa = 6.1RR34 pKa = 11.84HH35 pKa = 5.66GKK37 pKa = 10.04LSLGNRR43 pKa = 11.84VIGAVKK49 pKa = 10.17RR50 pKa = 11.84LRR52 pKa = 11.84GTVVRR57 pKa = 11.84RR58 pKa = 11.84PGEE61 pKa = 4.01KK62 pKa = 9.43ATGTQHH68 pKa = 5.6IHH70 pKa = 4.86EE71 pKa = 4.45THH73 pKa = 5.84SRR75 pKa = 11.84RR76 pKa = 11.84SVGRR80 pKa = 11.84SPRR83 pKa = 11.84FLQRR87 pKa = 11.84WRR89 pKa = 11.84RR90 pKa = 11.84KK91 pKa = 8.95RR92 pKa = 11.84AMGVARR98 pKa = 11.84HH99 pKa = 5.42SVGLL103 pKa = 3.74

Molecular weight: 11.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9534

478

10012

4982711

51

7917

497.7

54.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.909 ± 0.025

1.175 ± 0.01

5.748 ± 0.016

6.205 ± 0.029

3.489 ± 0.018

7.17 ± 0.023

2.417 ± 0.012

4.501 ± 0.014

4.839 ± 0.021

8.691 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.196 ± 0.009

3.505 ± 0.013

6.271 ± 0.027

4.05 ± 0.022

6.135 ± 0.024

7.958 ± 0.026

6.226 ± 0.021

6.374 ± 0.018

1.417 ± 0.01

2.725 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski