Moheibacter sediminis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Weeksellaceae; Moheibacter

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2974 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1W2C911|A0A1W2C911_9FLAO Putative fluoride ion transporter CrcB OS=Moheibacter sediminis OX=1434700 GN=crcB PE=3 SV=1
MM1 pKa = 7.82KK2 pKa = 9.9IFNYY6 pKa = 9.37ILSFIFISGLITSCSDD22 pKa = 4.21DD23 pKa = 5.53DD24 pKa = 4.0FTKK27 pKa = 10.89TNLNDD32 pKa = 3.63ALKK35 pKa = 10.42PSITSPSEE43 pKa = 3.66GSSYY47 pKa = 11.43EE48 pKa = 3.92LLQEE52 pKa = 4.2NAGNEE57 pKa = 4.1AFTMEE62 pKa = 4.15WEE64 pKa = 4.15EE65 pKa = 4.26ADD67 pKa = 3.9FGVNSPVKK75 pKa = 10.3YY76 pKa = 10.16DD77 pKa = 3.55VQASSSEE84 pKa = 4.18DD85 pKa = 3.48FSEE88 pKa = 4.22TTNVITALTGTSTSLTVGRR107 pKa = 11.84LNAVSLSSGLPFDD120 pKa = 4.23VEE122 pKa = 4.31GNLFIRR128 pKa = 11.84VKK130 pKa = 10.61AYY132 pKa = 10.77LGVAGSSGFIYY143 pKa = 10.37SEE145 pKa = 4.58PISLNVTPYY154 pKa = 10.84EE155 pKa = 3.92PLIDD159 pKa = 5.57LSTPWGMVGSAVPNGWEE176 pKa = 4.41GPDD179 pKa = 3.31VPFWKK184 pKa = 9.47TDD186 pKa = 3.53LNGIDD191 pKa = 3.56DD192 pKa = 4.72GKK194 pKa = 10.3YY195 pKa = 9.18VAYY198 pKa = 8.6ATLTDD203 pKa = 3.62GDD205 pKa = 3.64IKK207 pKa = 10.61IRR209 pKa = 11.84KK210 pKa = 8.55DD211 pKa = 3.45NSWDD215 pKa = 3.49EE216 pKa = 4.38NYY218 pKa = 10.87GGAAGTLVSNGDD230 pKa = 4.95DD231 pKa = 3.27IPMTAGTYY239 pKa = 10.1KK240 pKa = 10.73FNVDD244 pKa = 3.6MNALTYY250 pKa = 10.47EE251 pKa = 4.14FEE253 pKa = 4.3EE254 pKa = 4.59YY255 pKa = 10.35SWGIVGDD262 pKa = 3.8ATPNGWNGPDD272 pKa = 3.42VQLQYY277 pKa = 11.52NGATNTWDD285 pKa = 3.61AEE287 pKa = 4.54VEE289 pKa = 4.28FTNGNIKK296 pKa = 10.19FRR298 pKa = 11.84FNNAWALSYY307 pKa = 11.4GDD309 pKa = 3.82TGADD313 pKa = 3.07GTLEE317 pKa = 4.19SEE319 pKa = 4.38NGADD323 pKa = 3.75IPVTAGNYY331 pKa = 8.8LVSVDD336 pKa = 4.41FTNLTYY342 pKa = 10.68SITPLL347 pKa = 3.45

Molecular weight: 37.52 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1W2ATL0|A0A1W2ATL0_9FLAO Putative iron-regulated protein OS=Moheibacter sediminis OX=1434700 GN=SAMN06296427_10541 PE=4 SV=1
MM1 pKa = 7.54SVRR4 pKa = 11.84KK5 pKa = 9.68LKK7 pKa = 10.5PITPGQRR14 pKa = 11.84FRR16 pKa = 11.84IVNNFDD22 pKa = 3.19NVEE25 pKa = 4.17SVKK28 pKa = 10.43PEE30 pKa = 3.49KK31 pKa = 10.78SLTVGKK37 pKa = 10.15KK38 pKa = 9.23RR39 pKa = 11.84SGGRR43 pKa = 11.84NHH45 pKa = 6.53SGKK48 pKa = 8.3MTMRR52 pKa = 11.84YY53 pKa = 9.23IGGGHH58 pKa = 5.49KK59 pKa = 9.73QSYY62 pKa = 9.64RR63 pKa = 11.84IVDD66 pKa = 4.1FKK68 pKa = 11.27RR69 pKa = 11.84EE70 pKa = 4.05KK71 pKa = 10.74EE72 pKa = 4.26GVATVDD78 pKa = 4.3SIQYY82 pKa = 10.04DD83 pKa = 3.71PNRR86 pKa = 11.84TAFIALIVYY95 pKa = 10.33GDD97 pKa = 3.55GEE99 pKa = 4.33KK100 pKa = 10.32RR101 pKa = 11.84YY102 pKa = 10.71VIAQNGLKK110 pKa = 10.12KK111 pKa = 10.73GQTIEE116 pKa = 4.0SGEE119 pKa = 4.08NVAPEE124 pKa = 3.74IGNTLKK130 pKa = 10.95LKK132 pKa = 10.04NVPLGTVISCIEE144 pKa = 3.9LRR146 pKa = 11.84PGQGALMARR155 pKa = 11.84SAGSYY160 pKa = 9.0AQLVARR166 pKa = 11.84DD167 pKa = 3.78GKK169 pKa = 10.37YY170 pKa = 9.12ATVKK174 pKa = 10.47LPSGEE179 pKa = 3.88SRR181 pKa = 11.84MILVEE186 pKa = 4.29CKK188 pKa = 9.45ATIGVVSNSDD198 pKa = 3.13HH199 pKa = 5.64QLEE202 pKa = 4.55VSGKK206 pKa = 10.07AGRR209 pKa = 11.84TRR211 pKa = 11.84WKK213 pKa = 9.99GRR215 pKa = 11.84RR216 pKa = 11.84PRR218 pKa = 11.84TRR220 pKa = 11.84PMVMNPVDD228 pKa = 3.52HH229 pKa = 7.07PMGGGEE235 pKa = 3.92GRR237 pKa = 11.84ATGGIPRR244 pKa = 11.84SRR246 pKa = 11.84NGQPSKK252 pKa = 10.7GYY254 pKa = 8.28KK255 pKa = 8.33TRR257 pKa = 11.84APKK260 pKa = 8.88KK261 pKa = 7.78TSSKK265 pKa = 10.57YY266 pKa = 8.93IVEE269 pKa = 4.17RR270 pKa = 11.84RR271 pKa = 11.84KK272 pKa = 10.24KK273 pKa = 10.1

Molecular weight: 29.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2974

0

2974

985835

28

3536

331.5

37.51

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.889 ± 0.047

0.7 ± 0.015

5.413 ± 0.035

7.13 ± 0.046

5.412 ± 0.033

6.498 ± 0.049

1.696 ± 0.019

8.204 ± 0.043

7.651 ± 0.066

9.064 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.28 ± 0.02

6.588 ± 0.048

3.323 ± 0.027

3.623 ± 0.022

3.223 ± 0.029

6.646 ± 0.037

5.513 ± 0.045

5.926 ± 0.036

1.069 ± 0.017

4.152 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski