Achimota virus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Pararubulavirus; Achimota pararubulavirus 1

Average proteome isoelectric point is 6.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K7X4M6|K7X4M6_9MONO Fusion glycoprotein F0 OS=Achimota virus 1 OX=1261100 GN=F PE=3 SV=1
MM1 pKa = 7.43SSVFKK6 pKa = 10.91AFEE9 pKa = 4.08QFTLEE14 pKa = 3.48QDD16 pKa = 3.57QYY18 pKa = 11.86VGGNNLEE25 pKa = 4.56LPPEE29 pKa = 4.29TLQTTIKK36 pKa = 10.68VFILNTQNPQTRR48 pKa = 11.84YY49 pKa = 10.35QMLCFCLRR57 pKa = 11.84IIASNSARR65 pKa = 11.84TAQKK69 pKa = 9.4YY70 pKa = 9.41GAMLTVLSLPTAMMHH85 pKa = 4.62NHH87 pKa = 5.21MRR89 pKa = 11.84IADD92 pKa = 4.44RR93 pKa = 11.84SPDD96 pKa = 3.79SIIEE100 pKa = 4.32RR101 pKa = 11.84IEE103 pKa = 3.76IEE105 pKa = 4.03GFEE108 pKa = 4.28PGSYY112 pKa = 9.93RR113 pKa = 11.84LRR115 pKa = 11.84PNARR119 pKa = 11.84TPMTQGEE126 pKa = 4.68IIAMEE131 pKa = 4.32NMADD135 pKa = 4.26DD136 pKa = 4.89LPDD139 pKa = 4.01TIVNQTPFVNTATEE153 pKa = 4.93DD154 pKa = 4.0EE155 pKa = 4.76ICDD158 pKa = 3.7EE159 pKa = 4.21MEE161 pKa = 4.03KK162 pKa = 10.66FLNAVYY168 pKa = 10.47SVLIQVWVMVCKK180 pKa = 10.67CMTAFDD186 pKa = 4.24QPTGSDD192 pKa = 2.97ARR194 pKa = 11.84RR195 pKa = 11.84LAKK198 pKa = 10.15YY199 pKa = 7.91QQQGRR204 pKa = 11.84MDD206 pKa = 3.5QKK208 pKa = 10.9YY209 pKa = 8.56VLQGEE214 pKa = 4.53VRR216 pKa = 11.84RR217 pKa = 11.84LIQLCIRR224 pKa = 11.84EE225 pKa = 4.45SLTIRR230 pKa = 11.84QFLVNEE236 pKa = 4.03MQTARR241 pKa = 11.84RR242 pKa = 11.84QGPITGKK249 pKa = 9.65YY250 pKa = 7.68YY251 pKa = 11.56AMVGDD256 pKa = 3.68VARR259 pKa = 11.84YY260 pKa = 9.28IEE262 pKa = 4.23NAGMGAFFMTVKK274 pKa = 10.46FALGNRR280 pKa = 11.84WPPLALAAFSGEE292 pKa = 4.01LVKK295 pKa = 10.88IKK297 pKa = 10.64GLMMLYY303 pKa = 10.23RR304 pKa = 11.84KK305 pKa = 10.32LGDD308 pKa = 3.31RR309 pKa = 11.84AKK311 pKa = 11.1YY312 pKa = 8.51MALLEE317 pKa = 4.24MSEE320 pKa = 4.3MMDD323 pKa = 3.75FAPANYY329 pKa = 9.58QLLYY333 pKa = 10.1SYY335 pKa = 11.65AMGIGSVQDD344 pKa = 3.56PQMRR348 pKa = 11.84GYY350 pKa = 11.07NFARR354 pKa = 11.84PFLNPAFFQLGMEE367 pKa = 4.37TANRR371 pKa = 11.84QQGSVDD377 pKa = 3.22RR378 pKa = 11.84EE379 pKa = 3.97MAEE382 pKa = 4.08EE383 pKa = 4.62LGLTDD388 pKa = 3.28TEE390 pKa = 4.15RR391 pKa = 11.84RR392 pKa = 11.84EE393 pKa = 3.76MAAQVTRR400 pKa = 11.84LTTGRR405 pKa = 11.84GAGDD409 pKa = 3.22QQDD412 pKa = 3.17IVNIFGARR420 pKa = 11.84ARR422 pKa = 11.84NGRR425 pKa = 11.84HH426 pKa = 5.43GAQEE430 pKa = 3.68RR431 pKa = 11.84QFRR434 pKa = 11.84VIEE437 pKa = 4.33GDD439 pKa = 3.78DD440 pKa = 3.52VDD442 pKa = 5.49DD443 pKa = 5.94EE444 pKa = 4.49EE445 pKa = 7.19GEE447 pKa = 6.18DD448 pKa = 5.04DD449 pKa = 5.7DD450 pKa = 5.78QDD452 pKa = 4.07NDD454 pKa = 3.74DD455 pKa = 5.14EE456 pKa = 4.35EE457 pKa = 4.71AQRR460 pKa = 11.84QQYY463 pKa = 8.49IANEE467 pKa = 3.9QARR470 pKa = 11.84WQARR474 pKa = 11.84LAEE477 pKa = 4.19IEE479 pKa = 4.01EE480 pKa = 4.15RR481 pKa = 11.84QAAEE485 pKa = 3.77RR486 pKa = 11.84GRR488 pKa = 11.84NRR490 pKa = 11.84QGRR493 pKa = 11.84QQDD496 pKa = 3.33QARR499 pKa = 11.84DD500 pKa = 3.57IQRR503 pKa = 11.84ATAQVHH509 pKa = 5.03QEE511 pKa = 3.83PAAQDD516 pKa = 4.44LIADD520 pKa = 5.31LIEE523 pKa = 4.04

Molecular weight: 59.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K7Y0L1|K7Y0L1_9MONO Phosphoprotein OS=Achimota virus 1 OX=1261100 GN=P PE=3 SV=1
MM1 pKa = 7.7AHH3 pKa = 6.39RR4 pKa = 11.84QASVSLKK11 pKa = 10.01VDD13 pKa = 3.25PVSEE17 pKa = 4.31KK18 pKa = 10.2NHH20 pKa = 5.94LRR22 pKa = 11.84PFPIVQVTPDD32 pKa = 3.28SGNGRR37 pKa = 11.84GRR39 pKa = 11.84LMKK42 pKa = 10.21QIRR45 pKa = 11.84IKK47 pKa = 10.92DD48 pKa = 3.67LTPAGSTEE56 pKa = 3.9PPITFVNTYY65 pKa = 10.69GFVKK69 pKa = 10.34PLRR72 pKa = 11.84TRR74 pKa = 11.84SEE76 pKa = 4.2FFSEE80 pKa = 4.18FHH82 pKa = 6.89RR83 pKa = 11.84PDD85 pKa = 3.24SSPSITACTLPFGAGPNIDD104 pKa = 3.26HH105 pKa = 7.55PMRR108 pKa = 11.84LLEE111 pKa = 4.83EE112 pKa = 4.05IEE114 pKa = 4.08KK115 pKa = 10.61CHH117 pKa = 6.94IVMRR121 pKa = 11.84KK122 pKa = 8.62SASLRR127 pKa = 11.84EE128 pKa = 4.08EE129 pKa = 3.92VVYY132 pKa = 9.17TIQKK136 pKa = 9.67LPPILAYY143 pKa = 10.17HH144 pKa = 6.26QIASQKK150 pKa = 9.57LICVPSEE157 pKa = 4.37KK158 pKa = 10.36YY159 pKa = 10.6LKK161 pKa = 10.56APSKK165 pKa = 8.81MQSGVDD171 pKa = 3.36YY172 pKa = 8.25TYY174 pKa = 10.7CISFLSIVYY183 pKa = 8.82CPPSLKK189 pKa = 10.27FRR191 pKa = 11.84VLRR194 pKa = 11.84PLQMMRR200 pKa = 11.84SSTMRR205 pKa = 11.84SIQIEE210 pKa = 4.15VLLEE214 pKa = 3.91VDD216 pKa = 5.01CDD218 pKa = 4.06DD219 pKa = 4.57SSPATRR225 pKa = 11.84FLIRR229 pKa = 11.84DD230 pKa = 3.37EE231 pKa = 4.51ATQKK235 pKa = 9.32WRR237 pKa = 11.84ASVWFHH243 pKa = 6.44LCNIIKK249 pKa = 9.87SHH251 pKa = 6.21QGGDD255 pKa = 3.53KK256 pKa = 11.17YY257 pKa = 11.28DD258 pKa = 3.3DD259 pKa = 4.24HH260 pKa = 8.21YY261 pKa = 11.97FNDD264 pKa = 3.79KK265 pKa = 9.32CRR267 pKa = 11.84KK268 pKa = 7.7MDD270 pKa = 4.01LEE272 pKa = 4.35VGIIDD277 pKa = 3.23MWGPTFLVKK286 pKa = 10.56AHH288 pKa = 5.6GRR290 pKa = 11.84VPKK293 pKa = 9.93SAKK296 pKa = 10.27VYY298 pKa = 10.02FSQKK302 pKa = 8.94NWACHH307 pKa = 5.65PLVDD311 pKa = 5.19AAPALSKK318 pKa = 10.69ILWSVGASIVQVNAILQPSDD338 pKa = 4.08LNQLAQFSDD347 pKa = 3.9VIYY350 pKa = 9.69PKK352 pKa = 10.87VKK354 pKa = 10.1INRR357 pKa = 11.84ALAGSPPSKK366 pKa = 9.84WNPVKK371 pKa = 10.64KK372 pKa = 10.41AVLGG376 pKa = 3.89

Molecular weight: 42.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

2

8

5106

166

2271

638.3

71.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.091 ± 0.77

1.88 ± 0.26

5.112 ± 0.399

5.464 ± 0.519

3.662 ± 0.168

5.014 ± 0.493

1.861 ± 0.285

7.462 ± 0.555

5.288 ± 0.565

10.145 ± 1.373

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.742 ± 0.409

5.112 ± 0.522

5.484 ± 0.792

4.955 ± 0.897

5.092 ± 0.505

8.48 ± 0.948

5.895 ± 0.438

6.013 ± 0.385

1.018 ± 0.186

3.231 ± 0.463
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski