Fusobacterium sp. CAG:439

Taxonomy: cellular organisms; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples

Average proteome isoelectric point is 6.65

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2311 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R7JE10|R7JE10_9FUSO Transcriptional regulator LuxR family OS=Fusobacterium sp. CAG:439 OX=1262899 GN=BN657_00084 PE=4 SV=1
MM1 pKa = 7.66QYY3 pKa = 10.99QNDD6 pKa = 3.82RR7 pKa = 11.84NAVNLVEE14 pKa = 5.57AGLNSQDD21 pKa = 3.21AANNFIEE28 pKa = 4.91TYY30 pKa = 9.63FKK32 pKa = 11.11VVNKK36 pKa = 10.04CDD38 pKa = 3.7NLSGCFADD46 pKa = 3.84SYY48 pKa = 11.32KK49 pKa = 10.71KK50 pKa = 10.58ISGADD55 pKa = 3.35AGIGDD60 pKa = 3.88YY61 pKa = 10.68SSYY64 pKa = 11.2VIASGAALRR73 pKa = 11.84PAYY76 pKa = 10.53NRR78 pKa = 11.84VDD80 pKa = 3.52DD81 pKa = 4.23SVISFLVDD89 pKa = 3.19VNGKK93 pKa = 9.32QGPNIAGRR101 pKa = 11.84DD102 pKa = 3.77LFIMCLYY109 pKa = 10.73NNGVLDD115 pKa = 4.14DD116 pKa = 4.36ANYY119 pKa = 11.02NIDD122 pKa = 4.59DD123 pKa = 5.21DD124 pKa = 5.14GNTVNFSGAPSEE136 pKa = 4.34EE137 pKa = 3.81EE138 pKa = 4.1RR139 pKa = 11.84NDD141 pKa = 3.8LFNSQCISSNSDD153 pKa = 3.45GISGCFGKK161 pKa = 10.31ILNDD165 pKa = 3.21NWEE168 pKa = 3.95MTYY171 pKa = 11.36

Molecular weight: 18.61 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R7JEA2|R7JEA2_9FUSO Anhydro-N-acetylmuramic acid kinase OS=Fusobacterium sp. CAG:439 OX=1262899 GN=anmK PE=3 SV=1
MM1 pKa = 7.42ARR3 pKa = 11.84LAGVDD8 pKa = 3.49LPRR11 pKa = 11.84NKK13 pKa = 10.15RR14 pKa = 11.84MEE16 pKa = 3.88IALTYY21 pKa = 9.91IYY23 pKa = 10.66GIGPTRR29 pKa = 11.84AKK31 pKa = 10.41KK32 pKa = 10.38ILDD35 pKa = 3.53ATKK38 pKa = 10.09ISPDD42 pKa = 3.68LRR44 pKa = 11.84TDD46 pKa = 3.54DD47 pKa = 5.08LTDD50 pKa = 3.53EE51 pKa = 5.08DD52 pKa = 4.55IKK54 pKa = 11.3LLRR57 pKa = 11.84NEE59 pKa = 4.02LANYY63 pKa = 9.4HH64 pKa = 6.41IEE66 pKa = 4.36GDD68 pKa = 3.51LRR70 pKa = 11.84RR71 pKa = 11.84EE72 pKa = 4.02VTLHH76 pKa = 6.11IKK78 pKa = 10.22RR79 pKa = 11.84LQEE82 pKa = 3.7IGSYY86 pKa = 9.98RR87 pKa = 11.84GLRR90 pKa = 11.84HH91 pKa = 6.3KK92 pKa = 10.86RR93 pKa = 11.84NLPCRR98 pKa = 11.84GQRR101 pKa = 11.84TKK103 pKa = 10.84TNARR107 pKa = 11.84TRR109 pKa = 11.84RR110 pKa = 11.84GKK112 pKa = 10.45KK113 pKa = 9.91GLAITKK119 pKa = 10.11KK120 pKa = 9.23KK121 pKa = 8.2TAA123 pKa = 3.9

Molecular weight: 14.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2311

0

2311

640807

30

1484

277.3

31.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.872 ± 0.057

1.345 ± 0.024

5.827 ± 0.045

6.885 ± 0.056

4.534 ± 0.038

6.001 ± 0.056

1.515 ± 0.019

8.164 ± 0.049

8.974 ± 0.053

8.887 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.5 ± 0.027

6.328 ± 0.061

3.277 ± 0.028

3.237 ± 0.028

3.488 ± 0.029

5.942 ± 0.036

5.343 ± 0.038

6.018 ± 0.048

0.724 ± 0.017

4.134 ± 0.044
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski