Luteipulveratus halotolerans

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Dermacoccaceae; Luteipulveratus

Average proteome isoelectric point is 6.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3827 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0L6CH81|A0A0L6CH81_9MICO Proteasome protein OS=Luteipulveratus halotolerans OX=1631356 GN=VV01_07880 PE=4 SV=1
MM1 pKa = 7.86SEE3 pKa = 4.36LEE5 pKa = 4.11YY6 pKa = 10.25PADD9 pKa = 3.42LRR11 pKa = 11.84YY12 pKa = 8.7TGDD15 pKa = 3.84HH16 pKa = 6.32EE17 pKa = 4.42WVADD21 pKa = 3.65KK22 pKa = 11.31GDD24 pKa = 3.45GVVRR28 pKa = 11.84VGITAYY34 pKa = 10.48AQDD37 pKa = 3.56ALGDD41 pKa = 3.79VVYY44 pKa = 11.12VSLPAVGDD52 pKa = 3.64AVTAGDD58 pKa = 3.41SCGEE62 pKa = 4.14VEE64 pKa = 4.44STKK67 pKa = 10.7SVSDD71 pKa = 4.11LYY73 pKa = 11.49SPLEE77 pKa = 4.22GEE79 pKa = 4.51VVAVNDD85 pKa = 4.57ALDD88 pKa = 4.04GAPEE92 pKa = 4.13QVNSAPYY99 pKa = 9.06GDD101 pKa = 3.08GWMFEE106 pKa = 4.39MKK108 pKa = 10.45VADD111 pKa = 3.91PAAIEE116 pKa = 4.13ALLDD120 pKa = 3.48VEE122 pKa = 5.2AYY124 pKa = 9.4KK125 pKa = 10.06ATLGG129 pKa = 3.68

Molecular weight: 13.5 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0L6CM08|A0A0L6CM08_9MICO ATP-binding protein OS=Luteipulveratus halotolerans OX=1631356 GN=VV01_18400 PE=3 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84AKK15 pKa = 9.97KK16 pKa = 9.33HH17 pKa = 4.25GFRR20 pKa = 11.84LRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84AVLASRR35 pKa = 11.84RR36 pKa = 11.84SKK38 pKa = 10.74GRR40 pKa = 11.84ARR42 pKa = 11.84LSAA45 pKa = 3.91

Molecular weight: 5.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3827

0

3827

1160312

37

2006

303.2

32.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.987 ± 0.048

0.726 ± 0.011

6.66 ± 0.04

5.414 ± 0.043

2.613 ± 0.023

8.98 ± 0.039

2.306 ± 0.018

3.514 ± 0.027

2.166 ± 0.03

9.947 ± 0.045

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.939 ± 0.016

1.69 ± 0.019

5.469 ± 0.029

3.144 ± 0.022

7.725 ± 0.043

5.566 ± 0.029

6.267 ± 0.035

9.33 ± 0.039

1.562 ± 0.018

1.998 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski