Amino acid dipepetide frequency for Beihai zhaovirus-like virus 5

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.181AlaAla: 5.181 ± 0.0
0.0AlaCys: 0.0 ± 0.0
0.648AlaAsp: 0.648 ± 0.0
1.295AlaGlu: 1.295 ± 0.0
2.591AlaPhe: 2.591 ± 0.0
1.943AlaGly: 1.943 ± 0.0
0.0AlaHis: 0.0 ± 0.0
3.886AlaIle: 3.886 ± 0.0
3.886AlaLys: 3.886 ± 0.0
7.124AlaLeu: 7.124 ± 0.0
1.943AlaMet: 1.943 ± 0.0
3.886AlaAsn: 3.886 ± 0.0
1.943AlaPro: 1.943 ± 0.0
2.591AlaGln: 2.591 ± 0.0
0.648AlaArg: 0.648 ± 0.0
2.591AlaSer: 2.591 ± 0.0
2.591AlaThr: 2.591 ± 0.0
5.181AlaVal: 5.181 ± 0.0
1.943AlaTrp: 1.943 ± 0.0
1.295AlaTyr: 1.295 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.295CysAla: 1.295 ± 0.0
0.648CysCys: 0.648 ± 0.0
0.648CysAsp: 0.648 ± 0.0
1.295CysGlu: 1.295 ± 0.0
1.295CysPhe: 1.295 ± 0.0
1.295CysGly: 1.295 ± 0.0
1.295CysHis: 1.295 ± 0.0
0.0CysIle: 0.0 ± 0.0
1.943CysLys: 1.943 ± 0.0
2.591CysLeu: 2.591 ± 0.0
0.648CysMet: 0.648 ± 0.0
0.648CysAsn: 0.648 ± 0.0
1.295CysPro: 1.295 ± 0.0
0.648CysGln: 0.648 ± 0.0
0.648CysArg: 0.648 ± 0.0
1.943CysSer: 1.943 ± 0.0
0.0CysThr: 0.0 ± 0.0
3.238CysVal: 3.238 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.943CysTyr: 1.943 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.238AspAla: 3.238 ± 0.0
1.943AspCys: 1.943 ± 0.0
2.591AspAsp: 2.591 ± 0.0
3.886AspGlu: 3.886 ± 0.0
4.534AspPhe: 4.534 ± 0.0
4.534AspGly: 4.534 ± 0.0
1.943AspHis: 1.943 ± 0.0
2.591AspIle: 2.591 ± 0.0
2.591AspLys: 2.591 ± 0.0
3.886AspLeu: 3.886 ± 0.0
1.295AspMet: 1.295 ± 0.0
0.648AspAsn: 0.648 ± 0.0
1.943AspPro: 1.943 ± 0.0
3.886AspGln: 3.886 ± 0.0
2.591AspArg: 2.591 ± 0.0
3.238AspSer: 3.238 ± 0.0
4.534AspThr: 4.534 ± 0.0
7.772AspVal: 7.772 ± 0.0
1.295AspTrp: 1.295 ± 0.0
1.943AspTyr: 1.943 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.534GluAla: 4.534 ± 0.0
0.648GluCys: 0.648 ± 0.0
2.591GluAsp: 2.591 ± 0.0
3.238GluGlu: 3.238 ± 0.0
3.886GluPhe: 3.886 ± 0.0
1.295GluGly: 1.295 ± 0.0
2.591GluHis: 2.591 ± 0.0
0.648GluIle: 0.648 ± 0.0
4.534GluLys: 4.534 ± 0.0
2.591GluLeu: 2.591 ± 0.0
1.295GluMet: 1.295 ± 0.0
3.238GluAsn: 3.238 ± 0.0
3.238GluPro: 3.238 ± 0.0
1.943GluGln: 1.943 ± 0.0
1.295GluArg: 1.295 ± 0.0
3.886GluSer: 3.886 ± 0.0
4.534GluThr: 4.534 ± 0.0
3.238GluVal: 3.238 ± 0.0
1.295GluTrp: 1.295 ± 0.0
3.238GluTyr: 3.238 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.591PheAla: 2.591 ± 0.0
1.295PheCys: 1.295 ± 0.0
7.124PheAsp: 7.124 ± 0.0
4.534PheGlu: 4.534 ± 0.0
3.238PhePhe: 3.238 ± 0.0
0.648PheGly: 0.648 ± 0.0
1.295PheHis: 1.295 ± 0.0
0.648PheIle: 0.648 ± 0.0
3.238PheLys: 3.238 ± 0.0
4.534PheLeu: 4.534 ± 0.0
0.648PheMet: 0.648 ± 0.0
1.295PheAsn: 1.295 ± 0.0
1.295PhePro: 1.295 ± 0.0
3.238PheGln: 3.238 ± 0.0
1.943PheArg: 1.943 ± 0.0
6.477PheSer: 6.477 ± 0.0
1.943PheThr: 1.943 ± 0.0
2.591PheVal: 2.591 ± 0.0
0.648PheTrp: 0.648 ± 0.0
3.238PheTyr: 3.238 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
0.648GlyAla: 0.648 ± 0.0
1.943GlyCys: 1.943 ± 0.0
1.295GlyAsp: 1.295 ± 0.0
3.886GlyGlu: 3.886 ± 0.0
3.238GlyPhe: 3.238 ± 0.0
1.943GlyGly: 1.943 ± 0.0
2.591GlyHis: 2.591 ± 0.0
1.295GlyIle: 1.295 ± 0.0
2.591GlyLys: 2.591 ± 0.0
5.829GlyLeu: 5.829 ± 0.0
0.0GlyMet: 0.0 ± 0.0
2.591GlyAsn: 2.591 ± 0.0
0.648GlyPro: 0.648 ± 0.0
1.295GlyGln: 1.295 ± 0.0
2.591GlyArg: 2.591 ± 0.0
6.477GlySer: 6.477 ± 0.0
2.591GlyThr: 2.591 ± 0.0
0.648GlyVal: 0.648 ± 0.0
0.648GlyTrp: 0.648 ± 0.0
1.295GlyTyr: 1.295 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.295HisAla: 1.295 ± 0.0
1.943HisCys: 1.943 ± 0.0
0.648HisAsp: 0.648 ± 0.0
0.648HisGlu: 0.648 ± 0.0
0.648HisPhe: 0.648 ± 0.0
0.648HisGly: 0.648 ± 0.0
0.0HisHis: 0.0 ± 0.0
3.886HisIle: 3.886 ± 0.0
1.943HisLys: 1.943 ± 0.0
1.295HisLeu: 1.295 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.943HisAsn: 1.943 ± 0.0
1.943HisPro: 1.943 ± 0.0
1.295HisGln: 1.295 ± 0.0
2.591HisArg: 2.591 ± 0.0
0.648HisSer: 0.648 ± 0.0
0.0HisThr: 0.0 ± 0.0
1.943HisVal: 1.943 ± 0.0
0.0HisTrp: 0.0 ± 0.0
3.238HisTyr: 3.238 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
1.943IleAla: 1.943 ± 0.0
1.943IleCys: 1.943 ± 0.0
3.886IleAsp: 3.886 ± 0.0
2.591IleGlu: 2.591 ± 0.0
1.295IlePhe: 1.295 ± 0.0
1.295IleGly: 1.295 ± 0.0
0.648IleHis: 0.648 ± 0.0
0.0IleIle: 0.0 ± 0.0
1.295IleLys: 1.295 ± 0.0
7.124IleLeu: 7.124 ± 0.0
1.295IleMet: 1.295 ± 0.0
1.295IleAsn: 1.295 ± 0.0
1.295IlePro: 1.295 ± 0.0
2.591IleGln: 2.591 ± 0.0
4.534IleArg: 4.534 ± 0.0
4.534IleSer: 4.534 ± 0.0
1.295IleThr: 1.295 ± 0.0
2.591IleVal: 2.591 ± 0.0
0.648IleTrp: 0.648 ± 0.0
2.591IleTyr: 2.591 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.591LysAla: 2.591 ± 0.0
0.0LysCys: 0.0 ± 0.0
3.238LysAsp: 3.238 ± 0.0
5.181LysGlu: 5.181 ± 0.0
2.591LysPhe: 2.591 ± 0.0
2.591LysGly: 2.591 ± 0.0
1.295LysHis: 1.295 ± 0.0
5.181LysIle: 5.181 ± 0.0
5.829LysLys: 5.829 ± 0.0
5.829LysLeu: 5.829 ± 0.0
0.0LysMet: 0.0 ± 0.0
3.886LysAsn: 3.886 ± 0.0
5.181LysPro: 5.181 ± 0.0
2.591LysGln: 2.591 ± 0.0
3.886LysArg: 3.886 ± 0.0
7.124LysSer: 7.124 ± 0.0
3.886LysThr: 3.886 ± 0.0
3.238LysVal: 3.238 ± 0.0
0.648LysTrp: 0.648 ± 0.0
0.648LysTyr: 0.648 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.534LeuAla: 4.534 ± 0.0
1.295LeuCys: 1.295 ± 0.0
3.886LeuAsp: 3.886 ± 0.0
3.886LeuGlu: 3.886 ± 0.0
5.829LeuPhe: 5.829 ± 0.0
6.477LeuGly: 6.477 ± 0.0
1.943LeuHis: 1.943 ± 0.0
1.943LeuIle: 1.943 ± 0.0
7.124LeuLys: 7.124 ± 0.0
6.477LeuLeu: 6.477 ± 0.0
1.295LeuMet: 1.295 ± 0.0
3.238LeuAsn: 3.238 ± 0.0
6.477LeuPro: 6.477 ± 0.0
7.772LeuGln: 7.772 ± 0.0
2.591LeuArg: 2.591 ± 0.0
11.01LeuSer: 11.01 ± 0.0
4.534LeuThr: 4.534 ± 0.0
3.886LeuVal: 3.886 ± 0.0
0.0LeuTrp: 0.0 ± 0.0
5.829LeuTyr: 5.829 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
0.648MetAla: 0.648 ± 0.0
0.648MetCys: 0.648 ± 0.0
1.295MetAsp: 1.295 ± 0.0
1.295MetGlu: 1.295 ± 0.0
0.0MetPhe: 0.0 ± 0.0
0.0MetGly: 0.0 ± 0.0
0.0MetHis: 0.0 ± 0.0
2.591MetIle: 2.591 ± 0.0
0.0MetLys: 0.0 ± 0.0
1.295MetLeu: 1.295 ± 0.0
0.0MetMet: 0.0 ± 0.0
0.0MetAsn: 0.0 ± 0.0
1.943MetPro: 1.943 ± 0.0
0.0MetGln: 0.0 ± 0.0
1.943MetArg: 1.943 ± 0.0
1.943MetSer: 1.943 ± 0.0
0.0MetThr: 0.0 ± 0.0
1.295MetVal: 1.295 ± 0.0
0.0MetTrp: 0.0 ± 0.0
1.295MetTyr: 1.295 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.591AsnAla: 2.591 ± 0.0
1.943AsnCys: 1.943 ± 0.0
2.591AsnAsp: 2.591 ± 0.0
3.238AsnGlu: 3.238 ± 0.0
1.295AsnPhe: 1.295 ± 0.0
2.591AsnGly: 2.591 ± 0.0
0.648AsnHis: 0.648 ± 0.0
1.295AsnIle: 1.295 ± 0.0
0.648AsnLys: 0.648 ± 0.0
2.591AsnLeu: 2.591 ± 0.0
1.295AsnMet: 1.295 ± 0.0
0.0AsnAsn: 0.0 ± 0.0
3.238AsnPro: 3.238 ± 0.0
1.295AsnGln: 1.295 ± 0.0
2.591AsnArg: 2.591 ± 0.0
3.238AsnSer: 3.238 ± 0.0
1.295AsnThr: 1.295 ± 0.0
1.295AsnVal: 1.295 ± 0.0
1.295AsnTrp: 1.295 ± 0.0
1.943AsnTyr: 1.943 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.238ProAla: 3.238 ± 0.0
2.591ProCys: 2.591 ± 0.0
7.124ProAsp: 7.124 ± 0.0
3.886ProGlu: 3.886 ± 0.0
2.591ProPhe: 2.591 ± 0.0
1.295ProGly: 1.295 ± 0.0
0.0ProHis: 0.0 ± 0.0
1.295ProIle: 1.295 ± 0.0
3.886ProLys: 3.886 ± 0.0
3.886ProLeu: 3.886 ± 0.0
0.0ProMet: 0.0 ± 0.0
1.943ProAsn: 1.943 ± 0.0
1.295ProPro: 1.295 ± 0.0
0.648ProGln: 0.648 ± 0.0
1.943ProArg: 1.943 ± 0.0
4.534ProSer: 4.534 ± 0.0
0.648ProThr: 0.648 ± 0.0
1.295ProVal: 1.295 ± 0.0
1.295ProTrp: 1.295 ± 0.0
1.295ProTyr: 1.295 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.591GlnAla: 2.591 ± 0.0
0.648GlnCys: 0.648 ± 0.0
7.772GlnAsp: 7.772 ± 0.0
3.238GlnGlu: 3.238 ± 0.0
1.943GlnPhe: 1.943 ± 0.0
2.591GlnGly: 2.591 ± 0.0
3.238GlnHis: 3.238 ± 0.0
1.943GlnIle: 1.943 ± 0.0
1.943GlnLys: 1.943 ± 0.0
5.829GlnLeu: 5.829 ± 0.0
1.295GlnMet: 1.295 ± 0.0
2.591GlnAsn: 2.591 ± 0.0
1.295GlnPro: 1.295 ± 0.0
3.886GlnGln: 3.886 ± 0.0
3.238GlnArg: 3.238 ± 0.0
3.886GlnSer: 3.886 ± 0.0
5.181GlnThr: 5.181 ± 0.0
5.181GlnVal: 5.181 ± 0.0
1.295GlnTrp: 1.295 ± 0.0
1.943GlnTyr: 1.943 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.591ArgAla: 2.591 ± 0.0
1.295ArgCys: 1.295 ± 0.0
4.534ArgAsp: 4.534 ± 0.0
1.295ArgGlu: 1.295 ± 0.0
1.295ArgPhe: 1.295 ± 0.0
2.591ArgGly: 2.591 ± 0.0
1.295ArgHis: 1.295 ± 0.0
0.648ArgIle: 0.648 ± 0.0
1.943ArgLys: 1.943 ± 0.0
7.124ArgLeu: 7.124 ± 0.0
0.648ArgMet: 0.648 ± 0.0
0.648ArgAsn: 0.648 ± 0.0
2.591ArgPro: 2.591 ± 0.0
4.534ArgGln: 4.534 ± 0.0
3.886ArgArg: 3.886 ± 0.0
5.829ArgSer: 5.829 ± 0.0
2.591ArgThr: 2.591 ± 0.0
5.181ArgVal: 5.181 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
2.591ArgTyr: 2.591 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.181SerAla: 5.181 ± 0.0
0.648SerCys: 0.648 ± 0.0
1.295SerAsp: 1.295 ± 0.0
3.886SerGlu: 3.886 ± 0.0
6.477SerPhe: 6.477 ± 0.0
6.477SerGly: 6.477 ± 0.0
1.943SerHis: 1.943 ± 0.0
5.829SerIle: 5.829 ± 0.0
7.772SerLys: 7.772 ± 0.0
7.124SerLeu: 7.124 ± 0.0
0.648SerMet: 0.648 ± 0.0
3.238SerAsn: 3.238 ± 0.0
1.295SerPro: 1.295 ± 0.0
8.42SerGln: 8.42 ± 0.0
5.181SerArg: 5.181 ± 0.0
6.477SerSer: 6.477 ± 0.0
7.772SerThr: 7.772 ± 0.0
5.829SerVal: 5.829 ± 0.0
1.295SerTrp: 1.295 ± 0.0
3.238SerTyr: 3.238 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
1.295ThrAla: 1.295 ± 0.0
0.648ThrCys: 0.648 ± 0.0
0.0ThrAsp: 0.0 ± 0.0
1.295ThrGlu: 1.295 ± 0.0
3.238ThrPhe: 3.238 ± 0.0
3.238ThrGly: 3.238 ± 0.0
1.943ThrHis: 1.943 ± 0.0
3.886ThrIle: 3.886 ± 0.0
2.591ThrLys: 2.591 ± 0.0
5.181ThrLeu: 5.181 ± 0.0
0.0ThrMet: 0.0 ± 0.0
1.295ThrAsn: 1.295 ± 0.0
2.591ThrPro: 2.591 ± 0.0
7.124ThrGln: 7.124 ± 0.0
1.943ThrArg: 1.943 ± 0.0
5.829ThrSer: 5.829 ± 0.0
4.534ThrThr: 4.534 ± 0.0
5.181ThrVal: 5.181 ± 0.0
1.295ThrTrp: 1.295 ± 0.0
1.295ThrTyr: 1.295 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
1.295ValAla: 1.295 ± 0.0
3.238ValCys: 3.238 ± 0.0
3.886ValAsp: 3.886 ± 0.0
3.238ValGlu: 3.238 ± 0.0
1.943ValPhe: 1.943 ± 0.0
1.295ValGly: 1.295 ± 0.0
2.591ValHis: 2.591 ± 0.0
4.534ValIle: 4.534 ± 0.0
9.067ValLys: 9.067 ± 0.0
3.886ValLeu: 3.886 ± 0.0
0.648ValMet: 0.648 ± 0.0
1.943ValAsn: 1.943 ± 0.0
3.238ValPro: 3.238 ± 0.0
4.534ValGln: 4.534 ± 0.0
5.829ValArg: 5.829 ± 0.0
4.534ValSer: 4.534 ± 0.0
3.238ValThr: 3.238 ± 0.0
5.181ValVal: 5.181 ± 0.0
0.0ValTrp: 0.0 ± 0.0
4.534ValTyr: 4.534 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.648TrpAla: 0.648 ± 0.0
0.0TrpCys: 0.0 ± 0.0
1.943TrpAsp: 1.943 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.648TrpPhe: 0.648 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
1.295TrpIle: 1.295 ± 0.0
1.295TrpLys: 1.295 ± 0.0
0.648TrpLeu: 0.648 ± 0.0
1.295TrpMet: 1.295 ± 0.0
0.648TrpAsn: 0.648 ± 0.0
0.648TrpPro: 0.648 ± 0.0
0.648TrpGln: 0.648 ± 0.0
0.648TrpArg: 0.648 ± 0.0
2.591TrpSer: 2.591 ± 0.0
0.648TrpThr: 0.648 ± 0.0
0.0TrpVal: 0.0 ± 0.0
0.648TrpTrp: 0.648 ± 0.0
0.648TrpTyr: 0.648 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.238TyrAla: 3.238 ± 0.0
0.0TyrCys: 0.0 ± 0.0
3.886TyrAsp: 3.886 ± 0.0
1.943TyrGlu: 1.943 ± 0.0
3.886TyrPhe: 3.886 ± 0.0
1.295TyrGly: 1.295 ± 0.0
1.295TyrHis: 1.295 ± 0.0
1.295TyrIle: 1.295 ± 0.0
1.295TyrLys: 1.295 ± 0.0
5.181TyrLeu: 5.181 ± 0.0
1.295TyrMet: 1.295 ± 0.0
2.591TyrAsn: 2.591 ± 0.0
1.295TyrPro: 1.295 ± 0.0
2.591TyrGln: 2.591 ± 0.0
2.591TyrArg: 2.591 ± 0.0
3.238TyrSer: 3.238 ± 0.0
2.591TyrThr: 2.591 ± 0.0
3.886TyrVal: 3.886 ± 0.0
0.648TyrTrp: 0.648 ± 0.0
3.238TyrTyr: 3.238 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1545 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski