Shuangao alphatetra-like virus 1
Average proteome isoelectric point is 5.52
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1L3KJP8|A0A1L3KJP8_9VIRU Uncharacterized protein OS=Shuangao alphatetra-like virus 1 OX=1923464 PE=4 SV=1
MM1 pKa = 7.51 NSRR4 pKa = 11.84 YY5 pKa = 9.71 SQVAAYY11 pKa = 10.6 QNMAGSMTAPGFYY24 pKa = 9.88 RR25 pKa = 11.84 RR26 pKa = 11.84 NLGYY30 pKa = 10.55 NIRR33 pKa = 11.84 NGAYY37 pKa = 9.41 GFYY40 pKa = 10.27 RR41 pKa = 11.84 RR42 pKa = 11.84 NSRR45 pKa = 11.84 NMAQPTRR52 pKa = 11.84 PGEE55 pKa = 3.93 RR56 pKa = 11.84 LEE58 pKa = 4.55 TYY60 pKa = 10.1 DD61 pKa = 3.75 VPLGVITARR70 pKa = 11.84 GGAFGIGPDD79 pKa = 3.15 ATLYY83 pKa = 11.07 GGTKK87 pKa = 8.5 YY88 pKa = 9.12 TVDD91 pKa = 3.01 ALSYY95 pKa = 10.95 NNYY98 pKa = 9.34 DD99 pKa = 3.54 VKK101 pKa = 11.16 SVGVYY106 pKa = 9.74 WITALNEE113 pKa = 3.93 TNANGQIAVYY123 pKa = 8.7 LTLDD127 pKa = 3.78 PSATVPSTDD136 pKa = 3.13 QAVMNQVSATRR147 pKa = 11.84 DD148 pKa = 3.05 MGDD151 pKa = 2.98 IFFASDD157 pKa = 3.02 KK158 pKa = 10.33 RR159 pKa = 11.84 YY160 pKa = 7.63 TQATPLRR167 pKa = 11.84 FRR169 pKa = 11.84 TPPSNKK175 pKa = 8.93 VNYY178 pKa = 8.79 STGQADD184 pKa = 3.69 AGRR187 pKa = 11.84 GGAYY191 pKa = 9.67 EE192 pKa = 4.12 EE193 pKa = 3.87 QGKK196 pKa = 10.54 IIVAVVAPNSNITNYY211 pKa = 9.93 GSMFMRR217 pKa = 11.84 VTVAWSSPGAPNNLQNITINNDD239 pKa = 2.79 QTEE242 pKa = 4.03 KK243 pKa = 11.24 DD244 pKa = 3.18 KK245 pKa = 11.01 WNKK248 pKa = 9.4 VLATNDD254 pKa = 2.9 AVRR257 pKa = 11.84 IIWEE261 pKa = 3.83 NAAQDD266 pKa = 4.0 DD267 pKa = 4.39 YY268 pKa = 12.1 ADD270 pKa = 3.61 ISIGTSSSTTFYY282 pKa = 10.51 TYY284 pKa = 7.63 PTLSGIPSDD293 pKa = 4.58 SRR295 pKa = 11.84 DD296 pKa = 2.99 GCTFKK301 pKa = 10.42 TVQDD305 pKa = 3.69 DD306 pKa = 3.41 SGYY309 pKa = 11.16 DD310 pKa = 3.58 SNSYY314 pKa = 10.27 IYY316 pKa = 7.91 WTAGIDD322 pKa = 3.81 EE323 pKa = 5.87 LPTKK327 pKa = 10.43 APNGAPAKK335 pKa = 8.58 PTIKK339 pKa = 10.4 AWDD342 pKa = 3.77 ADD344 pKa = 3.72 EE345 pKa = 4.97 KK346 pKa = 11.26 KK347 pKa = 9.59 WVNNSNFGLPVFLTQPAVLDD367 pKa = 3.31 RR368 pKa = 11.84 HH369 pKa = 5.68 IQNVVNNVLRR379 pKa = 11.84 SQTQNSSVLTNQADD393 pKa = 4.22 SNNEE397 pKa = 3.74 PQIPAAVYY405 pKa = 10.17 IPDD408 pKa = 3.66 EE409 pKa = 4.15 NQPIKK414 pKa = 10.97 SEE416 pKa = 3.97 IVEE419 pKa = 4.04 QPIEE423 pKa = 4.04 VTINDD428 pKa = 3.36 QPIGVNVQNDD438 pKa = 3.98 VNTKK442 pKa = 7.26 ITSPIEE448 pKa = 3.88 SGRR451 pKa = 11.84 VLVSTDD457 pKa = 4.07 DD458 pKa = 4.01 DD459 pKa = 4.58 SSGITDD465 pKa = 3.64 ALEE468 pKa = 3.93 IAEE471 pKa = 4.37 VGLLFII477 pKa = 5.79
Molecular weight: 52.06 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 4.585
IPC2_protein 4.622
IPC_protein 4.596
Toseland 4.393
ProMoST 4.724
Dawson 4.558
Bjellqvist 4.711
Wikipedia 4.469
Rodwell 4.418
Grimsley 4.304
Solomon 4.558
Lehninger 4.507
Nozaki 4.66
DTASelect 4.902
Thurlkill 4.418
EMBOSS 4.482
Sillero 4.698
Patrickios 3.732
IPC_peptide 4.558
IPC2_peptide 4.685
IPC2.peptide.svr19 4.681
Protein with the highest isoelectric point:
>tr|A0A1L3KJY9|A0A1L3KJY9_9VIRU Uncharacterized protein OS=Shuangao alphatetra-like virus 1 OX=1923464 PE=4 SV=1
MM1 pKa = 8.42 DD2 pKa = 4.31 YY3 pKa = 11.17 GQTIFDD9 pKa = 3.94 KK10 pKa = 11.0 QRR12 pKa = 11.84 IAAAEE17 pKa = 4.28 NILTTNIINDD27 pKa = 3.69 AVDD30 pKa = 4.13 KK31 pKa = 10.99 SFKK34 pKa = 10.69 PNVTLTAEE42 pKa = 3.87 QHH44 pKa = 5.54 KK45 pKa = 8.6 TVTMWLRR52 pKa = 11.84 TPIYY56 pKa = 7.22 PTQTTYY62 pKa = 11.21 SPHH65 pKa = 7.08 PEE67 pKa = 4.02 MKK69 pKa = 9.94 TLLDD73 pKa = 4.09 FANQSLNATRR83 pKa = 11.84 LRR85 pKa = 11.84 KK86 pKa = 9.89 DD87 pKa = 2.97 IRR89 pKa = 11.84 VLEE92 pKa = 4.24 IGADD96 pKa = 3.71 EE97 pKa = 5.1 RR98 pKa = 11.84 IKK100 pKa = 9.8 TVKK103 pKa = 10.09 NLHH106 pKa = 6.2 HH107 pKa = 6.12 VCHH110 pKa = 6.89 YY111 pKa = 9.94 YY112 pKa = 10.58 RR113 pKa = 11.84 GIKK116 pKa = 9.78 DD117 pKa = 3.51 QARR120 pKa = 11.84 HH121 pKa = 4.8 LTYY124 pKa = 10.83 QFMKK128 pKa = 10.54 EE129 pKa = 3.29 RR130 pKa = 11.84 TTYY133 pKa = 10.2 HH134 pKa = 5.9 GQLLTDD140 pKa = 5.08 DD141 pKa = 3.51 NTKK144 pKa = 10.47 RR145 pKa = 11.84 CNKK148 pKa = 9.46 GFNKK152 pKa = 10.17 CSVQADD158 pKa = 4.15 MIIGAASTMDD168 pKa = 3.99 LDD170 pKa = 3.83 ATQFALGMEE179 pKa = 4.12 KK180 pKa = 10.27 HH181 pKa = 5.67 GALRR185 pKa = 11.84 AKK187 pKa = 10.16 LYY189 pKa = 9.82 MIIPPEE195 pKa = 3.72 ITRR198 pKa = 11.84 PEE200 pKa = 3.79 ITNLYY205 pKa = 8.95 TPYY208 pKa = 10.55 QLRR211 pKa = 11.84 YY212 pKa = 9.31 YY213 pKa = 9.23 DD214 pKa = 3.67 QKK216 pKa = 11.2 HH217 pKa = 5.4 QIIKK221 pKa = 10.54 INDD224 pKa = 3.55 EE225 pKa = 3.73 QDD227 pKa = 2.91 ILQIEE232 pKa = 4.4 YY233 pKa = 11.21 VEE235 pKa = 4.21 MLFANDD241 pKa = 3.19 TSSPYY246 pKa = 9.67 LHH248 pKa = 7.59 RR249 pKa = 11.84 YY250 pKa = 8.7 QSLLSWLKK258 pKa = 10.12 PGTYY262 pKa = 8.37 TDD264 pKa = 3.06 RR265 pKa = 11.84 RR266 pKa = 11.84 NYY268 pKa = 10.33 FIEE271 pKa = 3.93 RR272 pKa = 11.84 VAWHH276 pKa = 6.81 GPLVIIDD283 pKa = 3.62 VSAVLDD289 pKa = 3.74 GGRR292 pKa = 11.84 IGAYY296 pKa = 10.24 DD297 pKa = 3.16 IAFDD301 pKa = 3.86 EE302 pKa = 4.84 NYY304 pKa = 10.14 IIVPNAAEE312 pKa = 4.46 AIITGRR318 pKa = 11.84 VNHH321 pKa = 6.0 CHH323 pKa = 6.19 SRR325 pKa = 11.84 MFPADD330 pKa = 2.66 IVTRR334 pKa = 11.84 VLTYY338 pKa = 10.76 AEE340 pKa = 4.87 SLGQSNFDD348 pKa = 3.33 SAAIASYY355 pKa = 10.34 IRR357 pKa = 11.84 SQQTQISVGKK367 pKa = 8.7 QVIVQRR373 pKa = 11.84 FLLKK377 pKa = 10.6 QNNDD381 pKa = 3.26 FNFMVINLTLIAALRR396 pKa = 11.84 NYY398 pKa = 10.2 KK399 pKa = 9.06 RR400 pKa = 11.84 TTLISMAMEE409 pKa = 4.78 DD410 pKa = 4.12 SRR412 pKa = 11.84 EE413 pKa = 3.91 KK414 pKa = 10.49 LQSYY418 pKa = 9.99 RR419 pKa = 11.84 NNDD422 pKa = 3.36 LEE424 pKa = 4.2 IVGDD428 pKa = 3.9 KK429 pKa = 10.2 RR430 pKa = 11.84 IHH432 pKa = 7.09 SIKK435 pKa = 10.16 QDD437 pKa = 2.72 IATYY441 pKa = 10.49 CSVHH445 pKa = 4.74 YY446 pKa = 9.87 TNLKK450 pKa = 9.98 KK451 pKa = 10.62 KK452 pKa = 10.32 LFHH455 pKa = 6.87 NLTKK459 pKa = 10.24 TLNSLMDD466 pKa = 4.0 LGYY469 pKa = 10.49 RR470 pKa = 11.84 KK471 pKa = 10.25 EE472 pKa = 4.06 NVPLTFKK479 pKa = 10.79 NVEE482 pKa = 3.57 MWAGDD487 pKa = 3.88 SYY489 pKa = 11.83 LLDD492 pKa = 4.04 QIDD495 pKa = 3.8 VQVFGQRR502 pKa = 11.84 YY503 pKa = 5.16 YY504 pKa = 11.45 TMDD507 pKa = 3.25 FRR509 pKa = 11.84 NQVDD513 pKa = 3.79 DD514 pKa = 4.31 EE515 pKa = 4.8 YY516 pKa = 11.8 GGILHH521 pKa = 7.12 DD522 pKa = 5.16 LNLGFHH528 pKa = 5.57 TVEE531 pKa = 4.41 EE532 pKa = 4.4 SSEE535 pKa = 4.31 SNEE538 pKa = 4.51 EE539 pKa = 3.7 IDD541 pKa = 4.56 EE542 pKa = 4.15 QPMDD546 pKa = 4.47 DD547 pKa = 3.94 KK548 pKa = 11.21 QLTMRR553 pKa = 11.84 RR554 pKa = 11.84 MLNEE558 pKa = 4.62 LLILWEE564 pKa = 4.33 KK565 pKa = 9.67 CTIPNLSEE573 pKa = 3.99 GCVNFMNDD581 pKa = 2.51 HH582 pKa = 7.23 KK583 pKa = 10.78 IRR585 pKa = 11.84 HH586 pKa = 4.94 EE587 pKa = 4.08 QRR589 pKa = 11.84 LKK591 pKa = 10.72 DD592 pKa = 3.97 CDD594 pKa = 5.0 RR595 pKa = 11.84 ILQNINITRR604 pKa = 11.84 GVPGSGKK611 pKa = 10.22 SYY613 pKa = 10.57 QALKK617 pKa = 10.17 TSDD620 pKa = 3.19 AKK622 pKa = 10.43 TLFIAPTRR630 pKa = 11.84 ALAEE634 pKa = 4.21 EE635 pKa = 4.34 YY636 pKa = 10.94 KK637 pKa = 11.02 NLGKK641 pKa = 10.35 RR642 pKa = 11.84 ALTFQIAFTKK652 pKa = 10.26 IEE654 pKa = 4.09 THH656 pKa = 5.6 AKK658 pKa = 9.5 IYY660 pKa = 10.54 NHH662 pKa = 6.73 VILDD666 pKa = 3.81 EE667 pKa = 4.74 AFTMHH672 pKa = 7.28 PGYY675 pKa = 10.84 AIVLGMWFKK684 pKa = 11.03 KK685 pKa = 8.97 VTLIGDD691 pKa = 3.91 PDD693 pKa = 3.79 QIGFIDD699 pKa = 4.42 FDD701 pKa = 3.97 SALSPKK707 pKa = 9.64 HH708 pKa = 4.65 YY709 pKa = 10.2 TMIDD713 pKa = 3.31 LMGMIEE719 pKa = 4.83 PIRR722 pKa = 11.84 ITSYY726 pKa = 8.91 NASMRR731 pKa = 11.84 FGNEE735 pKa = 3.41 YY736 pKa = 8.78 ATKK739 pKa = 9.53 IGQHH743 pKa = 5.96 FGVNITGDD751 pKa = 3.69 PKK753 pKa = 9.63 KK754 pKa = 7.49 TTNIVYY760 pKa = 9.93 HH761 pKa = 7.35 DD762 pKa = 4.65 SLPDD766 pKa = 3.71 PKK768 pKa = 10.57 TKK770 pKa = 10.9 LEE772 pKa = 3.98 GMTIALSQNTAQLYY786 pKa = 9.73 NINTVHH792 pKa = 6.59 QSQGQNSPIVNIIIPKK808 pKa = 9.46 YY809 pKa = 9.55 DD810 pKa = 3.33 SKK812 pKa = 11.34 LAASQNHH819 pKa = 5.94 MYY821 pKa = 10.45 VALTRR826 pKa = 11.84 ASQTTNVYY834 pKa = 9.89 IEE836 pKa = 4.66 SGLALEE842 pKa = 4.72 PKK844 pKa = 10.04 YY845 pKa = 10.79 DD846 pKa = 4.08 LRR848 pKa = 11.84 INFKK852 pKa = 10.46 NALEE856 pKa = 4.3 RR857 pKa = 11.84 GAQNLYY863 pKa = 9.77 PLPNHH868 pKa = 5.51 EE869 pKa = 4.45 TIKK872 pKa = 11.05 AEE874 pKa = 4.49 VVTQPDD880 pKa = 3.43 LAAPKK885 pKa = 9.92 PMVVNTPQAIDD896 pKa = 3.58 QILTKK901 pKa = 10.46 INVPNNGGLRR911 pKa = 11.84 VYY913 pKa = 10.05 TKK915 pKa = 9.77 TKK917 pKa = 9.43 EE918 pKa = 3.51 IEE920 pKa = 4.14 YY921 pKa = 9.86 PVTIKK926 pKa = 11.0 GKK928 pKa = 9.31 FFEE931 pKa = 5.2 LRR933 pKa = 11.84 GLDD936 pKa = 3.68 LSNEE940 pKa = 3.87 LVMAGDD946 pKa = 4.5 RR947 pKa = 11.84 YY948 pKa = 11.08 SMEE951 pKa = 3.69 TRR953 pKa = 11.84 SADD956 pKa = 2.79 KK957 pKa = 10.06 CTALRR962 pKa = 11.84 TLINRR967 pKa = 11.84 YY968 pKa = 8.64 NGRR971 pKa = 11.84 PFHH974 pKa = 5.33 THH976 pKa = 6.26 YY977 pKa = 11.17 DD978 pKa = 3.66 DD979 pKa = 5.62 SLTKK983 pKa = 10.63 AQLLFANVKK992 pKa = 8.53 HH993 pKa = 5.58 TLFRR997 pKa = 11.84 DD998 pKa = 3.54 DD999 pKa = 3.47 VKK1001 pKa = 11.04 FIEE1004 pKa = 5.36 GSSILDD1010 pKa = 3.54 NQQKK1014 pKa = 10.56 EE1015 pKa = 4.25 IVNLVSKK1022 pKa = 10.12 MLGRR1026 pKa = 11.84 GSDD1029 pKa = 3.16 KK1030 pKa = 10.68 MVTDD1034 pKa = 4.68 EE1035 pKa = 5.49 IFDD1038 pKa = 3.43 KK1039 pKa = 10.27 RR1040 pKa = 11.84 TWVTSYY1046 pKa = 10.88 FLKK1049 pKa = 10.31 EE1050 pKa = 3.83 QSKK1053 pKa = 9.96 VKK1055 pKa = 10.46 PGGADD1060 pKa = 3.17 GSLTGKK1066 pKa = 10.27 AGQGVNATSKK1076 pKa = 9.56 TFNAIMGTMARR1087 pKa = 11.84 EE1088 pKa = 3.56 LDD1090 pKa = 3.46 NLYY1093 pKa = 10.59 RR1094 pKa = 11.84 RR1095 pKa = 11.84 ALNDD1099 pKa = 3.27 NVILANGMDD1108 pKa = 4.63 EE1109 pKa = 4.08 LRR1111 pKa = 11.84 MYY1113 pKa = 11.34 NSLKK1117 pKa = 10.64 LNNINYY1123 pKa = 9.39 SRR1125 pKa = 11.84 GYY1127 pKa = 10.12 SIDD1130 pKa = 3.64 VKK1132 pKa = 11.23 EE1133 pKa = 4.29 MDD1135 pKa = 3.22 STYY1138 pKa = 11.47 NLIAALYY1145 pKa = 8.87 FDD1147 pKa = 6.47 LILEE1151 pKa = 4.4 HH1152 pKa = 6.9 FGINPVLRR1160 pKa = 11.84 SVMFQLCITYY1170 pKa = 8.72 TINCVLSSMQAYY1182 pKa = 8.7 FKK1184 pKa = 10.76 LKK1186 pKa = 10.42 SGEE1189 pKa = 4.01 PCTLIKK1195 pKa = 10.82 NSIWAIAQVCDD1206 pKa = 3.44 PSVFVGIDD1214 pKa = 3.25 SGNVIILHH1222 pKa = 6.38 KK1223 pKa = 10.59 GDD1225 pKa = 5.13 DD1226 pKa = 3.3 IGIIGDD1232 pKa = 3.58 IKK1234 pKa = 10.77 INEE1237 pKa = 4.31 AKK1239 pKa = 9.6 LTLQNAALGMQLKK1252 pKa = 9.91 IDD1254 pKa = 4.32 DD1255 pKa = 3.88 KK1256 pKa = 11.42 TPIEE1260 pKa = 4.1 FCGDD1264 pKa = 4.62 FITGNGASLDD1274 pKa = 3.82 LVRR1277 pKa = 11.84 FALKK1281 pKa = 10.57 VKK1283 pKa = 10.5 SKK1285 pKa = 9.84 PLKK1288 pKa = 8.71 EE1289 pKa = 4.05 KK1290 pKa = 10.37 IYY1292 pKa = 10.55 FKK1294 pKa = 10.68 SDD1296 pKa = 2.83 KK1297 pKa = 10.27 NIKK1300 pKa = 8.71 IVHH1303 pKa = 5.54 YY1304 pKa = 10.56 NNYY1307 pKa = 10.28 SGDD1310 pKa = 3.44 KK1311 pKa = 10.16 HH1312 pKa = 6.6 CIKK1315 pKa = 10.48 HH1316 pKa = 6.56 SEE1318 pKa = 4.07 LDD1320 pKa = 3.38 YY1321 pKa = 11.17 TNYY1324 pKa = 10.4 FGILNFFKK1332 pKa = 10.88 NLSNDD1337 pKa = 2.91 EE1338 pKa = 3.93 WHH1340 pKa = 7.19 HH1341 pKa = 5.39 YY1342 pKa = 10.19 LSEE1345 pKa = 4.5 GNLTAEE1351 pKa = 4.25 QYY1353 pKa = 10.61 RR1354 pKa = 11.84 ILRR1357 pKa = 11.84 QMTRR1361 pKa = 11.84 VFKK1364 pKa = 10.66 IKK1366 pKa = 10.24 IILHH1370 pKa = 5.8 TDD1372 pKa = 3.14 VAANDD1377 pKa = 3.32 QAIQEE1382 pKa = 4.55 RR1383 pKa = 11.84 IISVKK1388 pKa = 10.21 DD1389 pKa = 3.53 RR1390 pKa = 11.84 LRR1392 pKa = 11.84 KK1393 pKa = 10.05 VYY1395 pKa = 8.57 DD1396 pKa = 3.35 TKK1398 pKa = 11.22 SYY1400 pKa = 11.46 SEE1402 pKa = 5.18 AINNTAVHH1410 pKa = 6.19 YY1411 pKa = 10.47 NLAPTEE1417 pKa = 4.09 CEE1419 pKa = 4.95 QIYY1422 pKa = 10.38 SWLKK1426 pKa = 10.79 NIGDD1430 pKa = 4.04 SNIKK1434 pKa = 8.68 QFRR1437 pKa = 11.84 KK1438 pKa = 10.09 YY1439 pKa = 9.69 YY1440 pKa = 8.5 RR1441 pKa = 11.84 KK1442 pKa = 9.39 EE1443 pKa = 3.53 YY1444 pKa = 10.08 RR1445 pKa = 11.84 PVVFIEE1451 pKa = 4.11 EE1452 pKa = 4.36 NEE1454 pKa = 4.5 DD1455 pKa = 3.7 EE1456 pKa = 4.58 PQHH1459 pKa = 4.9 THH1461 pKa = 4.47 QSIYY1465 pKa = 9.5 VTLEE1469 pKa = 3.93 DD1470 pKa = 3.61 YY1471 pKa = 11.39 GGDD1474 pKa = 3.49 GDD1476 pKa = 4.71 CFWRR1480 pKa = 11.84 AMGISSTKK1488 pKa = 10.53 YY1489 pKa = 8.44 GLARR1493 pKa = 11.84 NWVDD1497 pKa = 2.78 ATDD1500 pKa = 4.69 AVQVWPEE1507 pKa = 3.69 PLAILVIAKK1516 pKa = 9.62 SGNYY1520 pKa = 8.66 IVANCSDD1527 pKa = 4.2 RR1528 pKa = 11.84 QPDD1531 pKa = 3.23 IALKK1535 pKa = 10.37 LDD1537 pKa = 3.52 HH1538 pKa = 7.43 DD1539 pKa = 4.51 GEE1541 pKa = 4.64 KK1542 pKa = 10.41 AHH1544 pKa = 6.56 SGHH1547 pKa = 6.65 YY1548 pKa = 9.09 YY1549 pKa = 9.62 RR1550 pKa = 11.84 CLYY1553 pKa = 10.25 DD1554 pKa = 4.04 KK1555 pKa = 10.73 PNSIYY1560 pKa = 10.33 KK1561 pKa = 9.41 YY1562 pKa = 10.39 KK1563 pKa = 10.56 YY1564 pKa = 7.69 YY1565 pKa = 10.93 HH1566 pKa = 6.08 NLKK1569 pKa = 10.35 EE1570 pKa = 4.34 IYY1572 pKa = 9.88 QEE1574 pKa = 3.93 NN1575 pKa = 3.64
Molecular weight: 180.3 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.737
IPC2_protein 7.0
IPC_protein 6.942
Toseland 6.971
ProMoST 7.468
Dawson 7.541
Bjellqvist 7.732
Wikipedia 7.497
Rodwell 7.556
Grimsley 7.117
Solomon 7.556
Lehninger 7.571
Nozaki 7.907
DTASelect 7.775
Thurlkill 7.819
EMBOSS 7.834
Sillero 7.98
Patrickios 4.113
IPC_peptide 7.571
IPC2_peptide 7.132
IPC2.peptide.svr19 7.063
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4
0
4
2401
127
1575
600.3
67.97
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.789 ± 1.071
1.0 ± 0.279
6.581 ± 0.297
4.498 ± 0.536
3.832 ± 1.014
5.664 ± 0.581
2.291 ± 0.807
8.122 ± 0.555
5.831 ± 1.277
7.705 ± 1.242
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.291 ± 0.468
7.289 ± 0.725
4.332 ± 1.192
4.456 ± 0.238
4.54 ± 0.191
6.081 ± 0.725
7.122 ± 0.611
5.248 ± 0.955
0.916 ± 0.196
5.414 ± 0.27
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here