Menghai rhabdovirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Almendravirus; Menghai almendravirus

Average proteome isoelectric point is 7.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L2YVG6|A0A1L2YVG6_9RHAB GDP polyribonucleotidyltransferase OS=Menghai rhabdovirus OX=1919071 PE=4 SV=1
MM1 pKa = 7.98DD2 pKa = 3.66AHH4 pKa = 7.27KK5 pKa = 10.23FRR7 pKa = 11.84YY8 pKa = 9.46VDD10 pKa = 3.51GSGKK14 pKa = 10.39AWVKK18 pKa = 10.38DD19 pKa = 3.71VPSINMGDD27 pKa = 3.82SVDD30 pKa = 6.33DD31 pKa = 3.63PTTWLNDD38 pKa = 3.32GKK40 pKa = 10.52RR41 pKa = 11.84PKK43 pKa = 9.83LTIPKK48 pKa = 9.82AKK50 pKa = 10.58SNMLKK55 pKa = 9.18TVCKK59 pKa = 10.38YY60 pKa = 9.74FASQSASPEE69 pKa = 4.04NIEE72 pKa = 4.42PDD74 pKa = 3.3VALYY78 pKa = 10.72LLYY81 pKa = 10.37HH82 pKa = 6.63LSVKK86 pKa = 9.94YY87 pKa = 10.6IKK89 pKa = 10.57VDD91 pKa = 3.16IKK93 pKa = 11.5NKK95 pKa = 8.78LTLKK99 pKa = 10.72KK100 pKa = 10.39NIYY103 pKa = 9.81LNSGLKK109 pKa = 9.24TVDD112 pKa = 3.71DD113 pKa = 4.57LFDD116 pKa = 3.72VEE118 pKa = 4.92EE119 pKa = 5.12GEE121 pKa = 4.22EE122 pKa = 4.14LKK124 pKa = 11.22LSGDD128 pKa = 3.68NEE130 pKa = 4.29TSDD133 pKa = 4.49RR134 pKa = 11.84EE135 pKa = 4.18MPEE138 pKa = 4.49LEE140 pKa = 4.29ILSALLANYY149 pKa = 7.63RR150 pKa = 11.84ICGMASNADD159 pKa = 3.41QKK161 pKa = 11.37YY162 pKa = 8.49VQTLKK167 pKa = 11.12ARR169 pKa = 11.84MNRR172 pKa = 11.84TFVQKK177 pKa = 10.34QIIKK181 pKa = 10.71EE182 pKa = 4.02EE183 pKa = 4.0IQEE186 pKa = 4.06NFYY189 pKa = 11.37NALTWVNNYY198 pKa = 10.55NYY200 pKa = 9.5TRR202 pKa = 11.84LCAGIDD208 pKa = 3.47LLLFSDD214 pKa = 4.15KK215 pKa = 10.65NHH217 pKa = 7.16PYY219 pKa = 10.09SALRR223 pKa = 11.84MATQSSKK230 pKa = 10.9FKK232 pKa = 10.58DD233 pKa = 3.42CALIGEE239 pKa = 4.62INHH242 pKa = 6.59FLTTLSEE249 pKa = 4.35APMDD253 pKa = 3.69AWEE256 pKa = 4.52HH257 pKa = 5.93ALEE260 pKa = 3.98QSISKK265 pKa = 9.97EE266 pKa = 3.69IINIMTCLGRR276 pKa = 11.84GFEE279 pKa = 4.38GEE281 pKa = 4.08YY282 pKa = 11.02ANYY285 pKa = 9.26AKK287 pKa = 10.74EE288 pKa = 3.94MGAMDD293 pKa = 4.64KK294 pKa = 11.28SPFSVTANPNLHH306 pKa = 5.86NWMHH310 pKa = 6.84MICAMLSSEE319 pKa = 3.86RR320 pKa = 11.84SMNARR325 pKa = 11.84LASGNQHH332 pKa = 5.21TVFLTALACAYY343 pKa = 8.1TYY345 pKa = 10.61RR346 pKa = 11.84SKK348 pKa = 10.07TKK350 pKa = 9.58IQAVIYY356 pKa = 10.49KK357 pKa = 9.74DD358 pKa = 4.08DD359 pKa = 4.39HH360 pKa = 7.07DD361 pKa = 3.97SHH363 pKa = 7.23ARR365 pKa = 11.84SINEE369 pKa = 3.99STDD372 pKa = 3.26DD373 pKa = 3.72QIGMLEE379 pKa = 3.94TAEE382 pKa = 4.01NLKK385 pKa = 10.59ALRR388 pKa = 11.84DD389 pKa = 4.06DD390 pKa = 4.19GEE392 pKa = 4.21EE393 pKa = 4.14ASEE396 pKa = 3.49IWEE399 pKa = 3.94WFNNKK404 pKa = 7.93KK405 pKa = 9.2TIISDD410 pKa = 3.61EE411 pKa = 4.26RR412 pKa = 11.84PGTIGSYY419 pKa = 10.4LISKK423 pKa = 7.51MHH425 pKa = 6.34

Molecular weight: 48.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L2YVG9|A0A1L2YVG9_9RHAB G protein OS=Menghai rhabdovirus OX=1919071 PE=4 SV=1
MM1 pKa = 7.35TKK3 pKa = 10.4NIRR6 pKa = 11.84TILSDD11 pKa = 4.08FILRR15 pKa = 11.84QKK17 pKa = 9.38IAKK20 pKa = 10.02DD21 pKa = 2.74IGEE24 pKa = 4.4DD25 pKa = 3.13KK26 pKa = 11.05KK27 pKa = 11.08GFYY30 pKa = 10.15YY31 pKa = 10.73SRR33 pKa = 11.84IDD35 pKa = 3.72GPIMNN40 pKa = 5.24

Molecular weight: 4.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3364

40

2032

560.7

64.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.805 ± 0.88

1.486 ± 0.368

6.361 ± 0.389

6.897 ± 0.633

4.102 ± 0.395

4.251 ± 0.238

2.14 ± 0.217

8.383 ± 0.678

9.721 ± 1.343

9.245 ± 0.947

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.032 ± 0.367

7.134 ± 0.191

3.151 ± 0.103

2.497 ± 0.302

3.686 ± 0.531

8.205 ± 0.764

4.637 ± 0.491

4.786 ± 0.388

1.249 ± 0.119

5.232 ± 0.482
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski