Fluviicoccus keumensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Fluviicoccus

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3271 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V2G3V4|A0A4V2G3V4_9GAMM Basal-body rod modification protein FlgD OS=Fluviicoccus keumensis OX=1435465 GN=EV700_2430 PE=3 SV=1
MM1 pKa = 7.29SHH3 pKa = 6.97LPSAQEE9 pKa = 4.61LIALDD14 pKa = 4.22EE15 pKa = 4.37FLQSDD20 pKa = 4.71RR21 pKa = 11.84CPPDD25 pKa = 3.42TFNLAALRR33 pKa = 11.84GFIWAVLASPVPLAPDD49 pKa = 2.77EE50 pKa = 4.08WMPLIWEE57 pKa = 4.45GEE59 pKa = 4.07EE60 pKa = 4.78GEE62 pKa = 4.36EE63 pKa = 4.34NPRR66 pKa = 11.84FHH68 pKa = 7.99NEE70 pKa = 3.42EE71 pKa = 3.72EE72 pKa = 4.2AGMVMGTIIALYY84 pKa = 10.15DD85 pKa = 3.27HH86 pKa = 7.46AAQLVEE92 pKa = 5.6DD93 pKa = 4.16NASPIPADD101 pKa = 3.45YY102 pKa = 11.14AFNADD107 pKa = 3.79PEE109 pKa = 4.57LMVDD113 pKa = 5.7LIDD116 pKa = 3.55WCQGFLAGHH125 pKa = 7.16DD126 pKa = 3.54WLQQVWDD133 pKa = 4.3QVCEE137 pKa = 4.2AYY139 pKa = 10.52AKK141 pKa = 10.73VADD144 pKa = 4.01AEE146 pKa = 4.6INLSDD151 pKa = 5.02EE152 pKa = 4.23INNVINVVGLFAGYY166 pKa = 9.78PEE168 pKa = 4.5VLDD171 pKa = 4.53HH172 pKa = 7.4LEE174 pKa = 4.57DD175 pKa = 4.23PQAVAADD182 pKa = 4.02LPMVAKK188 pKa = 10.51DD189 pKa = 3.88VLPQALLAYY198 pKa = 9.94ARR200 pKa = 11.84TGLEE204 pKa = 3.87FCDD207 pKa = 3.68EE208 pKa = 4.04QMEE211 pKa = 4.27MEE213 pKa = 4.16AAEE216 pKa = 4.21NEE218 pKa = 4.53GG219 pKa = 3.49

Molecular weight: 24.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4Q7ZAD6|A0A4Q7ZAD6_9GAMM Iron-binding protein IscA OS=Fluviicoccus keumensis OX=1435465 GN=EV700_0515 PE=3 SV=1
MM1 pKa = 7.67PKK3 pKa = 10.09KK4 pKa = 10.53SPQRR8 pKa = 11.84KK9 pKa = 7.88HH10 pKa = 5.99RR11 pKa = 11.84LRR13 pKa = 11.84RR14 pKa = 11.84QLLQKK19 pKa = 10.25HH20 pKa = 5.34QRR22 pKa = 11.84QQQQLRR28 pKa = 11.84RR29 pKa = 11.84QQWFLLLQPQPLLPLAALQPGQLQPWPALTT59 pKa = 3.82

Molecular weight: 7.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3271

0

3271

1113237

31

6807

340.3

37.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.946 ± 0.048

0.977 ± 0.016

5.489 ± 0.03

5.668 ± 0.043

3.662 ± 0.027

7.877 ± 0.048

2.289 ± 0.026

4.828 ± 0.033

3.699 ± 0.037

11.125 ± 0.064

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.535 ± 0.024

3.164 ± 0.035

5.082 ± 0.035

4.007 ± 0.028

6.599 ± 0.047

5.537 ± 0.043

5.251 ± 0.063

7.248 ± 0.04

1.435 ± 0.016

2.582 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski