Croton yellow vein mosaic alphasatellite

Taxonomy: Viruses; Alphasatellitidae; Geminialphasatellitinae; Clecrusatellite

Average proteome isoelectric point is 6.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D3HTY0|D3HTY0_9VIRU Replication protein OS=Croton yellow vein mosaic alphasatellite OX=713089 GN=alpha rep PE=4 SV=1
MM1 pKa = 6.91SHH3 pKa = 5.9SRR5 pKa = 11.84NWCFTIFNYY14 pKa = 9.97VLPLFTTLPEE24 pKa = 3.79WANYY28 pKa = 10.27LVFQEE33 pKa = 4.98EE34 pKa = 4.62EE35 pKa = 4.36CPTTKK40 pKa = 9.85KK41 pKa = 10.48RR42 pKa = 11.84HH43 pKa = 4.56IQGYY47 pKa = 9.82VNLKK51 pKa = 9.19RR52 pKa = 11.84NQRR55 pKa = 11.84FAFLKK60 pKa = 10.48KK61 pKa = 9.96KK62 pKa = 10.7LPDD65 pKa = 3.85GSHH68 pKa = 6.86IEE70 pKa = 4.0PCRR73 pKa = 11.84GSASSNRR80 pKa = 11.84DD81 pKa = 3.15YY82 pKa = 10.47CTKK85 pKa = 10.47DD86 pKa = 2.88ASRR89 pKa = 11.84TGGPWEE95 pKa = 4.17FGVFCEE101 pKa = 4.38TGSNKK106 pKa = 9.76RR107 pKa = 11.84KK108 pKa = 7.94TMEE111 pKa = 4.3RR112 pKa = 11.84FQEE115 pKa = 4.28DD116 pKa = 4.08PEE118 pKa = 4.17EE119 pKa = 4.61LRR121 pKa = 11.84LADD124 pKa = 3.63PKK126 pKa = 10.93LYY128 pKa = 10.25RR129 pKa = 11.84RR130 pKa = 11.84CLATKK135 pKa = 10.51VNTEE139 pKa = 3.71FSGLVLPVPDD149 pKa = 5.19RR150 pKa = 11.84PWQLVAQKK158 pKa = 10.95ALDD161 pKa = 3.56QGPDD165 pKa = 3.18DD166 pKa = 4.05RR167 pKa = 11.84TIIWVYY173 pKa = 10.5GSEE176 pKa = 4.1GNEE179 pKa = 4.89GKK181 pKa = 7.15TTWAKK186 pKa = 10.56IKK188 pKa = 10.3IQEE191 pKa = 3.75GWFYY195 pKa = 11.47SRR197 pKa = 11.84GGKK200 pKa = 9.87GEE202 pKa = 4.13NIKK205 pKa = 10.35YY206 pKa = 10.12QYY208 pKa = 10.88AEE210 pKa = 4.16HH211 pKa = 6.98LGHH214 pKa = 6.82CVFDD218 pKa = 3.66IPRR221 pKa = 11.84QVEE224 pKa = 4.24DD225 pKa = 3.31NLQYY229 pKa = 10.79TVLEE233 pKa = 4.5EE234 pKa = 3.95IKK236 pKa = 10.78DD237 pKa = 3.69RR238 pKa = 11.84LIRR241 pKa = 11.84SSKK244 pKa = 10.56YY245 pKa = 10.02EE246 pKa = 4.51PIDD249 pKa = 3.78FNCSDD254 pKa = 3.65KK255 pKa = 11.19VHH257 pKa = 6.57LVVLSNFLPCLDD269 pKa = 3.29VEE271 pKa = 4.56YY272 pKa = 10.84NNRR275 pKa = 11.84GEE277 pKa = 4.25LVKK280 pKa = 10.8KK281 pKa = 10.14PLLSRR286 pKa = 11.84DD287 pKa = 2.91RR288 pKa = 11.84VFIINIDD295 pKa = 3.63EE296 pKa = 4.59SVCGHH301 pKa = 7.3PDD303 pKa = 3.24DD304 pKa = 5.56LKK306 pKa = 11.53NFDD309 pKa = 4.28VYY311 pKa = 11.54LEE313 pKa = 4.05

Molecular weight: 36.45 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D3HTY0|D3HTY0_9VIRU Replication protein OS=Croton yellow vein mosaic alphasatellite OX=713089 GN=alpha rep PE=4 SV=1
MM1 pKa = 6.91SHH3 pKa = 5.9SRR5 pKa = 11.84NWCFTIFNYY14 pKa = 9.97VLPLFTTLPEE24 pKa = 3.79WANYY28 pKa = 10.27LVFQEE33 pKa = 4.98EE34 pKa = 4.62EE35 pKa = 4.36CPTTKK40 pKa = 9.85KK41 pKa = 10.48RR42 pKa = 11.84HH43 pKa = 4.56IQGYY47 pKa = 9.82VNLKK51 pKa = 9.19RR52 pKa = 11.84NQRR55 pKa = 11.84FAFLKK60 pKa = 10.48KK61 pKa = 9.96KK62 pKa = 10.7LPDD65 pKa = 3.85GSHH68 pKa = 6.86IEE70 pKa = 4.0PCRR73 pKa = 11.84GSASSNRR80 pKa = 11.84DD81 pKa = 3.15YY82 pKa = 10.47CTKK85 pKa = 10.47DD86 pKa = 2.88ASRR89 pKa = 11.84TGGPWEE95 pKa = 4.17FGVFCEE101 pKa = 4.38TGSNKK106 pKa = 9.76RR107 pKa = 11.84KK108 pKa = 7.94TMEE111 pKa = 4.3RR112 pKa = 11.84FQEE115 pKa = 4.28DD116 pKa = 4.08PEE118 pKa = 4.17EE119 pKa = 4.61LRR121 pKa = 11.84LADD124 pKa = 3.63PKK126 pKa = 10.93LYY128 pKa = 10.25RR129 pKa = 11.84RR130 pKa = 11.84CLATKK135 pKa = 10.51VNTEE139 pKa = 3.71FSGLVLPVPDD149 pKa = 5.19RR150 pKa = 11.84PWQLVAQKK158 pKa = 10.95ALDD161 pKa = 3.56QGPDD165 pKa = 3.18DD166 pKa = 4.05RR167 pKa = 11.84TIIWVYY173 pKa = 10.5GSEE176 pKa = 4.1GNEE179 pKa = 4.89GKK181 pKa = 7.15TTWAKK186 pKa = 10.56IKK188 pKa = 10.3IQEE191 pKa = 3.75GWFYY195 pKa = 11.47SRR197 pKa = 11.84GGKK200 pKa = 9.87GEE202 pKa = 4.13NIKK205 pKa = 10.35YY206 pKa = 10.12QYY208 pKa = 10.88AEE210 pKa = 4.16HH211 pKa = 6.98LGHH214 pKa = 6.82CVFDD218 pKa = 3.66IPRR221 pKa = 11.84QVEE224 pKa = 4.24DD225 pKa = 3.31NLQYY229 pKa = 10.79TVLEE233 pKa = 4.5EE234 pKa = 3.95IKK236 pKa = 10.78DD237 pKa = 3.69RR238 pKa = 11.84LIRR241 pKa = 11.84SSKK244 pKa = 10.56YY245 pKa = 10.02EE246 pKa = 4.51PIDD249 pKa = 3.78FNCSDD254 pKa = 3.65KK255 pKa = 11.19VHH257 pKa = 6.57LVVLSNFLPCLDD269 pKa = 3.29VEE271 pKa = 4.56YY272 pKa = 10.84NNRR275 pKa = 11.84GEE277 pKa = 4.25LVKK280 pKa = 10.8KK281 pKa = 10.14PLLSRR286 pKa = 11.84DD287 pKa = 2.91RR288 pKa = 11.84VFIINIDD295 pKa = 3.63EE296 pKa = 4.59SVCGHH301 pKa = 7.3PDD303 pKa = 3.24DD304 pKa = 5.56LKK306 pKa = 11.53NFDD309 pKa = 4.28VYY311 pKa = 11.54LEE313 pKa = 4.05

Molecular weight: 36.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

313

313

313

313.0

36.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.195 ± 0.0

3.195 ± 0.0

6.39 ± 0.0

7.987 ± 0.0

5.112 ± 0.0

6.07 ± 0.0

2.236 ± 0.0

4.792 ± 0.0

7.348 ± 0.0

8.946 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

0.639 ± 0.0

5.431 ± 0.0

5.431 ± 0.0

3.514 ± 0.0

6.709 ± 0.0

5.431 ± 0.0

4.792 ± 0.0

6.39 ± 0.0

2.236 ± 0.0

4.153 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski