Streptococcus satellite phage Javan538

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZQA2|A0A4D5ZQA2_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan538 OX=2558732 GN=JavanS538_0006 PE=4 SV=1
MM1 pKa = 7.46TEE3 pKa = 3.55NHH5 pKa = 6.21YY6 pKa = 10.99LEE8 pKa = 4.44QAEE11 pKa = 4.29KK12 pKa = 10.96DD13 pKa = 3.61RR14 pKa = 11.84LEE16 pKa = 4.75LEE18 pKa = 4.25QHH20 pKa = 6.33HH21 pKa = 7.08LNYY24 pKa = 9.99MADD27 pKa = 3.77DD28 pKa = 3.97TPIYY32 pKa = 9.65PSNIPKK38 pKa = 10.44LMEE41 pKa = 4.03IAKK44 pKa = 9.99KK45 pKa = 10.13LQAEE49 pKa = 4.2DD50 pKa = 3.33TSLNIYY56 pKa = 9.2EE57 pKa = 5.15LYY59 pKa = 9.95KK60 pKa = 10.61QPEE63 pKa = 4.11ARR65 pKa = 11.84TKK67 pKa = 10.57LFSQITEE74 pKa = 3.83ACYY77 pKa = 9.19MALSATPTQAQRR89 pKa = 11.84LAFCDD94 pKa = 3.79YY95 pKa = 11.34LEE97 pKa = 4.08QQYY100 pKa = 11.5EE101 pKa = 4.16NTLKK105 pKa = 11.01KK106 pKa = 10.21MIASTDD112 pKa = 3.41KK113 pKa = 10.77QALGEE118 pKa = 4.11LLDD121 pKa = 4.47LLEE124 pKa = 5.0LPAEE128 pKa = 4.35IEE130 pKa = 4.32SQFIRR135 pKa = 11.84DD136 pKa = 3.75MAVSGILAKK145 pKa = 10.63DD146 pKa = 3.18

Molecular weight: 16.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZPR2|A0A4D5ZPR2_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan538 OX=2558732 GN=JavanS538_0011 PE=4 SV=1
MM1 pKa = 7.78KK2 pKa = 10.26INEE5 pKa = 4.22IKK7 pKa = 10.67KK8 pKa = 9.76KK9 pKa = 10.54DD10 pKa = 3.3GSTVYY15 pKa = 10.36RR16 pKa = 11.84ANVYY20 pKa = 10.59LGVDD24 pKa = 4.14VITGKK29 pKa = 10.74KK30 pKa = 7.55VTTKK34 pKa = 9.32VTARR38 pKa = 11.84TKK40 pKa = 10.91KK41 pKa = 9.48EE42 pKa = 4.24LKK44 pKa = 9.67TKK46 pKa = 10.1AQQAQFDD53 pKa = 4.54FKK55 pKa = 11.59ANGSTRR61 pKa = 11.84YY62 pKa = 9.46KK63 pKa = 10.03EE64 pKa = 4.34VVIEE68 pKa = 4.33TYY70 pKa = 10.79EE71 pKa = 3.89EE72 pKa = 4.27LAISWWDD79 pKa = 3.38SYY81 pKa = 11.84KK82 pKa = 10.19NTVKK86 pKa = 10.93ANTRR90 pKa = 11.84NTQKK94 pKa = 10.88VLLNNHH100 pKa = 5.76VLPLFGGFKK109 pKa = 10.16LDD111 pKa = 4.12KK112 pKa = 9.92LTTPLIQSTMNKK124 pKa = 9.46LANSTNTGEE133 pKa = 4.13VGAYY137 pKa = 8.68LHH139 pKa = 6.32YY140 pKa = 10.97GKK142 pKa = 9.58IHH144 pKa = 5.96TLNKK148 pKa = 10.19RR149 pKa = 11.84ILQYY153 pKa = 11.17GVILQVIPTNPANNVVLPRR172 pKa = 11.84NTQKK176 pKa = 11.1DD177 pKa = 3.22KK178 pKa = 10.56KK179 pKa = 10.89AKK181 pKa = 9.81VKK183 pKa = 10.6HH184 pKa = 5.76FNNDD188 pKa = 2.8EE189 pKa = 4.08LKK191 pKa = 10.82QFLTYY196 pKa = 10.53LDD198 pKa = 4.07SLDD201 pKa = 3.36NSKK204 pKa = 11.22YY205 pKa = 8.53KK206 pKa = 10.13TYY208 pKa = 11.4YY209 pKa = 10.78DD210 pKa = 2.93ITLYY214 pKa = 10.96KK215 pKa = 10.3FLLATGCRR223 pKa = 11.84INEE226 pKa = 4.0ALALSWSDD234 pKa = 2.86IDD236 pKa = 4.49LDD238 pKa = 3.79NSVVHH243 pKa = 5.57ITKK246 pKa = 9.13TLNYY250 pKa = 8.52RR251 pKa = 11.84KK252 pKa = 9.31EE253 pKa = 4.21VNSPKK258 pKa = 10.6SKK260 pKa = 10.59AGYY263 pKa = 9.68RR264 pKa = 11.84DD265 pKa = 3.11IDD267 pKa = 3.51IDD269 pKa = 3.82QQTATMLKK277 pKa = 9.78RR278 pKa = 11.84YY279 pKa = 7.54QRR281 pKa = 11.84KK282 pKa = 6.4QTQEE286 pKa = 3.04AWKK289 pKa = 10.12LGRR292 pKa = 11.84TEE294 pKa = 4.07TVVFSDD300 pKa = 5.91FINAYY305 pKa = 8.69PNYY308 pKa = 9.19KK309 pKa = 10.04AVSSRR314 pKa = 11.84LRR316 pKa = 11.84THH318 pKa = 6.7FKK320 pKa = 10.39KK321 pKa = 10.74AGVNNIGFHH330 pKa = 5.79GFRR333 pKa = 11.84HH334 pKa = 4.87THH336 pKa = 6.58ASLLLNSGIPYY347 pKa = 10.0KK348 pKa = 10.34EE349 pKa = 3.8LQHH352 pKa = 6.73RR353 pKa = 11.84LGHH356 pKa = 5.68STLSMTMDD364 pKa = 4.17TYY366 pKa = 11.8SHH368 pKa = 7.15LSKK371 pKa = 11.01EE372 pKa = 4.3NAKK375 pKa = 10.31KK376 pKa = 9.46ATSFYY381 pKa = 10.79EE382 pKa = 4.07KK383 pKa = 10.41ALKK386 pKa = 10.52SII388 pKa = 4.29

Molecular weight: 44.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13

0

13

2424

62

502

186.5

21.4

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.941 ± 0.491

0.454 ± 0.103

5.734 ± 0.501

7.508 ± 0.863

3.919 ± 0.616

5.239 ± 0.47

1.691 ± 0.31

6.724 ± 0.593

8.663 ± 0.677

9.158 ± 0.611

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.98 ± 0.327

6.436 ± 0.606

3.837 ± 0.583

4.249 ± 0.66

4.414 ± 0.469

5.652 ± 0.31

6.601 ± 0.699

5.611 ± 0.542

1.073 ± 0.141

5.116 ± 0.448
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski