Synechocystis sp. (strain PCC 6803 / Kazusa)
Average proteome isoelectric point is 6.14
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3508 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|P74474|P74474_SYNY3 D-alanyl-D-alanine carboxypeptidase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1924 PE=4 SV=1
MM1 pKa = 7.7 TINLADD7 pKa = 4.36 RR8 pKa = 11.84 LSALTTDD15 pKa = 3.83 SAGTTHH21 pKa = 6.16 VVWVEE26 pKa = 3.88 NTSLWHH32 pKa = 6.56 AVYY35 pKa = 10.47 DD36 pKa = 4.25 PNSAMWVNAQVIANVGNQSLTSLNLIANDD65 pKa = 4.97 KK66 pKa = 10.6 LIQPPGNNSNAAPAPGLVVVYY87 pKa = 8.77 QQGSGNDD94 pKa = 2.91 SDD96 pKa = 4.22 IFYY99 pKa = 9.3 TAARR103 pKa = 11.84 YY104 pKa = 9.44 NSGGRR109 pKa = 11.84 TEE111 pKa = 4.32 WLSTPQALTSDD122 pKa = 3.9 QVGDD126 pKa = 3.87 LAPRR130 pKa = 11.84 AIAEE134 pKa = 4.22 EE135 pKa = 4.25 NGTVLVVGQKK145 pKa = 9.85 VDD147 pKa = 3.31 AEE149 pKa = 4.23 QAKK152 pKa = 9.53 NQAIRR157 pKa = 11.84 EE158 pKa = 4.25 DD159 pKa = 3.49 TDD161 pKa = 4.5 LYY163 pKa = 10.13 YY164 pKa = 10.82 QSFTVNQNQFSSNQNSPASGNIIQGNSYY192 pKa = 11.03 NYY194 pKa = 10.41 LGRR197 pKa = 11.84 NRR199 pKa = 11.84 NAPAASYY206 pKa = 9.74 EE207 pKa = 4.11 VLSAGEE213 pKa = 4.27 ASFLGNKK220 pKa = 7.31 PTYY223 pKa = 10.02 QGLGLNWNASNEE235 pKa = 4.05 FNINALSLILAKK247 pKa = 10.73 KK248 pKa = 10.33 LGQEE252 pKa = 3.97 PEE254 pKa = 4.2 KK255 pKa = 10.75 VLKK258 pKa = 11.15 SMFGPLILSISLQGSSGNNPEE279 pKa = 3.52 WSLFGGGEE287 pKa = 4.2 STKK290 pKa = 10.58 GRR292 pKa = 11.84 LLLNSLATVGRR303 pKa = 11.84 KK304 pKa = 7.21 QRR306 pKa = 11.84 RR307 pKa = 11.84 NVGNSEE313 pKa = 3.76 DD314 pKa = 3.76 SNRR317 pKa = 11.84 FDD319 pKa = 2.97 KK320 pKa = 10.56 WRR322 pKa = 11.84 SQGRR326 pKa = 11.84 GALSPDD332 pKa = 3.28 SQEE335 pKa = 4.66 GFDD338 pKa = 5.24 LSFTLSSLYY347 pKa = 10.77 SYY349 pKa = 11.5 GNSNGNSDD357 pKa = 4.23 GKK359 pKa = 10.89 FPLYY363 pKa = 10.8 LEE365 pKa = 4.47 TGGALASLAGSIPLFGFDD383 pKa = 5.54 DD384 pKa = 3.56 ILNRR388 pKa = 11.84 GLNFNFGLFFNAGVALQWQVAPKK411 pKa = 10.73 DD412 pKa = 3.52 PGNYY416 pKa = 9.14 FPLLAPYY423 pKa = 10.58 LDD425 pKa = 4.28 LSGNTDD431 pKa = 3.26 RR432 pKa = 11.84 LFITDD437 pKa = 3.88 GFYY440 pKa = 11.11 NALPTYY446 pKa = 10.62 SEE448 pKa = 4.1 VTAALALLSNLEE460 pKa = 4.01 AAFASIDD467 pKa = 3.64 QNSSVEE473 pKa = 4.17 LEE475 pKa = 4.15 SLLVGIPVTLGFEE488 pKa = 4.3 GTLEE492 pKa = 3.68 IPFIFKK498 pKa = 10.74 LFGSIGFFADD508 pKa = 3.46 GTFTIKK514 pKa = 10.82 GDD516 pKa = 3.87 TPSSITIGAPFNLTVSLLGLIGARR540 pKa = 11.84 IAGFPTWTQTFAASSSQNNQTGLEE564 pKa = 4.2 ANNTASVDD572 pKa = 3.7 GFLLTINLAQFLEE585 pKa = 4.87 PNLSLNPTDD594 pKa = 3.77 FTVTVTNANGQISTIPVFGVVVQTDD619 pKa = 3.67 SQSNNSEE626 pKa = 3.95 VILRR630 pKa = 11.84 LEE632 pKa = 3.8 QEE634 pKa = 3.95 IPYY637 pKa = 7.9 TTVNGQPFSNIIVKK651 pKa = 10.51 YY652 pKa = 10.58 SGNQLGNFTSSPVALQSPDD671 pKa = 3.31 TLIYY675 pKa = 9.94 TYY677 pKa = 10.91 NPTSGTGNDD686 pKa = 3.45 YY687 pKa = 8.83 TQNNQQITIAFNGPLDD703 pKa = 4.29 PDD705 pKa = 3.66 ILPTEE710 pKa = 4.16 NQLLNWFAVTNSSNQAIAITDD731 pKa = 3.48 VAVNQSRR738 pKa = 11.84 IVLTLASNTAINPGEE753 pKa = 4.41 IYY755 pKa = 9.9 TVQYY759 pKa = 11.12 NPDD762 pKa = 3.8 ANSDD766 pKa = 3.84 QQLKK770 pKa = 10.21 AANQKK775 pKa = 9.27 TITAFTVSNGTAPTAWGLINRR796 pKa = 11.84 TFAGVINVQTQPVLSNLTSDD816 pKa = 4.84 FAQDD820 pKa = 3.48 TSPALALTSQGDD832 pKa = 3.51 ILLAWSSDD840 pKa = 3.7 TPPITPISVLAEE852 pKa = 3.68 GDD854 pKa = 3.52 YY855 pKa = 10.98 LYY857 pKa = 11.34 LVFADD862 pKa = 3.59 NLKK865 pKa = 10.45 NDD867 pKa = 3.91 SANPPSNSQFTIKK880 pKa = 9.93 TSDD883 pKa = 3.41 GNTTTPTNVSLAQNTITLTLTNSVNASQIVEE914 pKa = 3.94 VSYY917 pKa = 11.31 SLSGTNLTSNLYY929 pKa = 10.39 LADD932 pKa = 3.73 ATNTSFWVPDD942 pKa = 3.5 FTNSVQSAGSTSTAPTSLLGSVISNLITIPFNQTLNVNQIPNGGQFQVTVNGNSTSPITVTSVTVADD1009 pKa = 3.86 TSITLVLNQIIGQGQLVTITYY1030 pKa = 7.7 TPNSNGEE1037 pKa = 4.09 NNLVSNTGTPQTVASFSTNNFLTTASSTGTVIKK1070 pKa = 9.44 TAFSPFGDD1078 pKa = 3.74 SGISSITTIPGTTGINSDD1096 pKa = 3.82 VVATLYY1102 pKa = 10.51 QNPSTKK1108 pKa = 10.53 ALQNVVAWVNVDD1120 pKa = 3.38 TSALSLKK1127 pKa = 8.86 TIPGQNYY1134 pKa = 8.95 GPNEE1138 pKa = 3.83 AALITTAAQQSDD1150 pKa = 3.54 IYY1152 pKa = 10.76 YY1153 pKa = 10.78 AVLGPDD1159 pKa = 3.84 NQWGLAAPIFSSQPGQDD1176 pKa = 3.0 QKK1178 pKa = 10.72 VTLGVGPGGNLLAAWLNTQLDD1199 pKa = 3.84 SDD1201 pKa = 4.52 GDD1203 pKa = 4.25 PNTTIQLATFNGTTWTNPTILGGANAGINPNSFSEE1238 pKa = 4.33 LSISSINGQPAIFWTEE1254 pKa = 3.73 SRR1256 pKa = 11.84 PPSYY1260 pKa = 11.3 SNLVSEE1266 pKa = 4.52 QNPLVYY1272 pKa = 10.42 LRR1274 pKa = 11.84 LGEE1277 pKa = 4.16 LSGTTVINQGQLSVAGNGTYY1297 pKa = 8.77 STAGYY1302 pKa = 8.48 TLGQVGALEE1311 pKa = 4.15 NTNTNTGDD1319 pKa = 3.47 FNPAVLFNGGGITINSPVPVSVQGFSVEE1347 pKa = 4.31 FWFKK1351 pKa = 11.12 LPTSDD1356 pKa = 4.98 GVVGLANLAGVFDD1369 pKa = 5.13 LSLNEE1374 pKa = 4.64 DD1375 pKa = 3.78 SLTFTLNNGSNPQISGTVTTGNWHH1399 pKa = 5.71 YY1400 pKa = 11.5 VVGTYY1405 pKa = 10.92 DD1406 pKa = 3.57 PVKK1409 pKa = 10.67 QILDD1413 pKa = 4.15 LYY1415 pKa = 11.34 LDD1417 pKa = 4.07 GQLVNTLEE1425 pKa = 4.54 NIAFANLPQSGTLTLAGSGGSVYY1448 pKa = 10.72 LDD1450 pKa = 2.85 EE1451 pKa = 4.56 FAFYY1455 pKa = 11.08 NSILSYY1461 pKa = 10.82 VDD1463 pKa = 3.64 NGSSPSSSNNNFLNLTGSQLINGIWGVNEE1492 pKa = 4.11 VGSHH1496 pKa = 3.87 YY1497 pKa = 8.64 QARR1500 pKa = 11.84 FFEE1503 pKa = 4.82 PVTAGPEE1510 pKa = 4.07 TNYY1513 pKa = 10.75 SVWDD1517 pKa = 3.51 SSGNSWQSPVSINPVDD1533 pKa = 3.79 EE1534 pKa = 4.35 VVPTILSAANNPIWDD1549 pKa = 3.61 IVSANPAGNNNAQIAPNGNPDD1570 pKa = 3.83 TIFQVNLTGQQGSEE1584 pKa = 3.59 ITGFTVTTSNNQLWTVGTDD1603 pKa = 3.38 GTGNAFSEE1611 pKa = 4.47 SWQLGVILAEE1621 pKa = 4.57 NADD1624 pKa = 3.69 STTPQLEE1631 pKa = 4.7 FISGDD1636 pKa = 3.3 KK1637 pKa = 10.67 LLNSLNPGATFSHH1650 pKa = 6.34 RR1651 pKa = 11.84 VMGATEE1657 pKa = 4.08 TFTIFVDD1664 pKa = 4.04 TEE1666 pKa = 4.25 GSPLTSPATVNIYY1679 pKa = 10.55 LQGQTDD1685 pKa = 5.34 PITFTSLSPIPNQGGPVSANSPDD1708 pKa = 3.73 YY1709 pKa = 11.23 LDD1711 pKa = 3.95 NQVLGIATIKK1721 pKa = 9.66 EE1722 pKa = 4.13 ANDD1725 pKa = 3.43 ASLSLVDD1732 pKa = 4.04 SGFVIDD1738 pKa = 4.6 TDD1740 pKa = 3.74 NPAIAAVMASGFSNGALAYY1759 pKa = 10.06 VAVGNRR1765 pKa = 11.84 GYY1767 pKa = 6.79 TTQGNAVQGSIQILFAGGDD1786 pKa = 3.67 VLSQKK1791 pKa = 9.29 STLPLTTTDD1800 pKa = 3.89 LSGNGDD1806 pKa = 3.6 GVLITGITDD1815 pKa = 3.87 AGDD1818 pKa = 3.41 INNNVPMALVTGDD1831 pKa = 3.28 VDD1833 pKa = 4.18 GDD1835 pKa = 4.18 GVDD1838 pKa = 4.76 DD1839 pKa = 4.99 LVIGNANANGGTGSIYY1855 pKa = 10.47 VINGHH1860 pKa = 5.77 YY1861 pKa = 10.89 LNGLKK1866 pKa = 10.41 GKK1868 pKa = 8.88 NQIIDD1873 pKa = 3.95 LSNASNWTSDD1883 pKa = 3.01 QGFVIDD1889 pKa = 5.37 GVDD1892 pKa = 3.29 AEE1894 pKa = 4.67 GGAGFSVAIGNFTGNDD1910 pKa = 3.4 PQIAFGAPFAKK1921 pKa = 10.3 NGNGVAVGKK1930 pKa = 10.44 VYY1932 pKa = 10.63 LVSPSNPSQLSPIHH1946 pKa = 6.59 IGNTFNLTNPQNPAQTVTVGEE1967 pKa = 4.15 TAGYY1971 pKa = 9.69 SLGVSRR1977 pKa = 11.84 KK1978 pKa = 8.76 ISGGPVTFTNNSGDD1992 pKa = 3.74 DD1993 pKa = 3.83 LFIGSSTYY2001 pKa = 10.52 GVQVSNQWVGKK2012 pKa = 9.91 SALPSNNQGNYY2023 pKa = 9.6 PDD2025 pKa = 3.72 TTMIAAGAVHH2035 pKa = 7.03 VYY2037 pKa = 10.14 SQTSSQPFGKK2047 pKa = 10.12 VATYY2051 pKa = 8.64 TGPNIPAANGVGANYY2066 pKa = 10.17 LAGAAISLGDD2076 pKa = 3.79 FTDD2079 pKa = 3.92 LDD2081 pKa = 4.34 GDD2083 pKa = 4.05 GHH2085 pKa = 6.54 QDD2087 pKa = 3.43 LAISALGVNGSAGAVYY2103 pKa = 10.42 ALSGSKK2109 pKa = 8.01 FTPSSSLQALNEE2121 pKa = 4.13 AGNLIINGGIAGGRR2135 pKa = 11.84 AGMTIMTPGDD2145 pKa = 3.69 VNGDD2149 pKa = 3.9 GYY2151 pKa = 11.53 QDD2153 pKa = 3.81 FLITAPQAGNGTGQSYY2169 pKa = 11.14 LLFGPLDD2176 pKa = 4.12 LSTEE2180 pKa = 3.88 IVPIIEE2186 pKa = 4.47 LNAIANDD2193 pKa = 3.62 SKK2195 pKa = 11.39 QVFVLNGSLPNQLAGTAVVSLGNITGTQGPNNRR2228 pKa = 11.84 PIDD2231 pKa = 3.86 SFLISAPNAQQFYY2244 pKa = 10.59 VVFGQPWLAADD2255 pKa = 4.62 GSLNLADD2262 pKa = 3.73 VASDD2266 pKa = 3.12 NGFVIDD2272 pKa = 5.16 GNLIGNPPTTFEE2284 pKa = 4.26 TTSQYY2289 pKa = 10.89 IDD2291 pKa = 3.44 TTPAILINGSNLYY2304 pKa = 9.86 LAYY2307 pKa = 9.92 KK2308 pKa = 10.5 GFGGNNQIYY2317 pKa = 8.0 FTVSTNNGQSWNSEE2331 pKa = 3.85 VQLPQSAQTIFPPAIAFFNNVLYY2354 pKa = 10.54 LAYY2357 pKa = 10.64 VDD2359 pKa = 4.87 GNNGLNIITSQDD2371 pKa = 3.19 QGQTWNAPLALGGTSSTPPTLFVYY2395 pKa = 10.35 QGTLSLLFAANNSTSTVLQFYY2416 pKa = 10.57 LNSSNEE2422 pKa = 3.64 WIYY2425 pKa = 11.63 ANEE2428 pKa = 3.95 IGSNQTAISAISATVLGDD2446 pKa = 3.45 TLYY2449 pKa = 11.21 LVYY2452 pKa = 10.67 KK2453 pKa = 10.28 GGTRR2457 pKa = 11.84 NTPSTLDD2464 pKa = 3.89 YY2465 pKa = 10.26 ITSTTNADD2473 pKa = 3.37 LSANDD2478 pKa = 3.82 WSSIPIPGVSSQGGPSLTNDD2498 pKa = 3.19 GTNLYY2503 pKa = 10.49 LSYY2506 pKa = 10.9 LDD2508 pKa = 5.51 SSNQLNFVSSGNGINWSSPQVITNNISQSPPAIAFANNEE2547 pKa = 4.46 LYY2549 pKa = 10.75 LSYY2552 pKa = 10.36 PGPQGSQEE2560 pKa = 4.18 LNVTSFPLPFTGSILGNGSLVRR2582 pKa = 11.84 FLGDD2586 pKa = 3.2 VNGDD2590 pKa = 3.19 GFADD2594 pKa = 3.79 VFSGGTNAGAIIFGNSTKK2612 pKa = 10.94 DD2613 pKa = 3.53 LLTTASGSEE2622 pKa = 4.11 DD2623 pKa = 3.38 LVISVPNATLRR2634 pKa = 11.84 DD2635 pKa = 4.04 VISVGDD2641 pKa = 3.73 FNGDD2645 pKa = 3.71 GIKK2648 pKa = 10.73 DD2649 pKa = 3.71 LGVLDD2654 pKa = 4.45 GNGNFYY2660 pKa = 11.15 VVLGNTSLGDD2670 pKa = 3.88 LKK2672 pKa = 10.24 TLSITSSSSPVVINQVGGVTKK2693 pKa = 10.89 SMAIGDD2699 pKa = 4.2 YY2700 pKa = 11.17 NGDD2703 pKa = 3.53 GYY2705 pKa = 11.39 DD2706 pKa = 5.94 DD2707 pKa = 3.74 VLLWGDD2713 pKa = 4.06 NGNQVAWGNSTGVLNSFTNIDD2734 pKa = 3.68 YY2735 pKa = 10.9 PEE2737 pKa = 4.33 TQTTATGVDD2746 pKa = 4.22 LNSDD2750 pKa = 5.13 GIPEE2754 pKa = 3.9 IAIGSDD2760 pKa = 2.85 EE2761 pKa = 4.46 RR2762 pKa = 11.84 KK2763 pKa = 9.52 IAGQISTSGSFSLLPTPTTSSVINTLAAANQLEE2796 pKa = 4.42 NIGDD2800 pKa = 3.83 FNGDD2804 pKa = 4.18 GIADD2808 pKa = 4.34 LAVLASNYY2816 pKa = 8.71 YY2817 pKa = 9.81 AAAIGEE2823 pKa = 4.45 PNNLPNYY2830 pKa = 10.16 LSRR2833 pKa = 11.84 PGNQGGVFIFYY2844 pKa = 10.7 GNSNGLSNTAQPDD2857 pKa = 3.91 VILAAPFTNPSGQISTYY2874 pKa = 7.91 QLSRR2878 pKa = 11.84 IAQAGDD2884 pKa = 3.31 VNGDD2888 pKa = 3.44 GFDD2891 pKa = 4.49 DD2892 pKa = 4.54 LLISSPYY2899 pKa = 9.54 TVDD2902 pKa = 3.73 AEE2904 pKa = 4.25 NNQGGVFVVFGGDD2917 pKa = 3.09 DD2918 pKa = 3.43 WNNQPFDD2925 pKa = 4.13 LGQLRR2930 pKa = 11.84 ANQSQGSNPRR2940 pKa = 11.84 GFAIDD2945 pKa = 4.31 GSPNSQAGIALNGGGDD2961 pKa = 3.39 INGDD2965 pKa = 3.39 GFADD2969 pKa = 5.11 FIIGAPGEE2977 pKa = 4.27 NNLQYY2982 pKa = 10.53 NQQIVFIEE2990 pKa = 4.1 NGEE2993 pKa = 4.09 LSDD2996 pKa = 4.28 DD2997 pKa = 4.09 DD2998 pKa = 4.25 KK2999 pKa = 11.77 YY3000 pKa = 11.87 SYY3002 pKa = 10.89 ILYY3005 pKa = 10.24 LDD3007 pKa = 4.27 GNQTIQMGGGDD3018 pKa = 3.51 WQANQVWTNQVATNWNNSSRR3038 pKa = 11.84 PPEE3041 pKa = 3.96 AVIGQSNGDD3050 pKa = 2.54 IWYY3053 pKa = 10.2 YY3054 pKa = 10.37 PGGNQNWQSWGKK3066 pKa = 10.15 LPAEE3070 pKa = 4.22 INEE3073 pKa = 4.69 LAVNWNTSGNPQIIAGLGGKK3093 pKa = 10.06 GGIEE3097 pKa = 4.51 YY3098 pKa = 10.61 YY3099 pKa = 10.75 NGSTWVNNGPYY3110 pKa = 9.91 QGDD3113 pKa = 3.54 GWRR3116 pKa = 11.84 SAITQMAVQWGEE3128 pKa = 4.17 DD3129 pKa = 3.66 GSPSQIVVGLADD3141 pKa = 3.71 GAVIYY3146 pKa = 11.03 YY3147 pKa = 7.47 NTQSGWRR3154 pKa = 11.84 TINNFGKK3161 pKa = 10.29 SVTQLSVQWQEE3172 pKa = 3.5 ASNPNIVVGLDD3183 pKa = 3.32 NSEE3186 pKa = 3.8 VQYY3189 pKa = 10.74 YY3190 pKa = 9.84 QGSNGVWTQFHH3201 pKa = 7.43 DD3202 pKa = 4.6 DD3203 pKa = 3.08 GWVYY3207 pKa = 10.22 PVQQLAVQWTSNDD3220 pKa = 3.3 AQPLVVVGLGDD3231 pKa = 4.27 DD3232 pKa = 3.6 NGNNGSVWYY3241 pKa = 8.93 YY3242 pKa = 10.25 QGSGEE3247 pKa = 4.11 QGGWTFLSGLPSGAAIAQMAVQWNFSSSPNPPNNVNDD3284 pKa = 3.85 LKK3286 pKa = 10.92 IVVGQADD3293 pKa = 4.03 STVSYY3298 pKa = 11.22 YY3299 pKa = 11.12 NGNGWTATPAINSSLQIPTLNAITVQWSANGQPQITVGLGDD3340 pKa = 3.79 PEE3342 pKa = 4.32 YY3343 pKa = 11.32 DD3344 pKa = 5.24 NGQLWYY3350 pKa = 10.38 LPNPSQSWQEE3360 pKa = 3.8 LQGSVNYY3367 pKa = 9.93 ASPITQIDD3375 pKa = 4.05 SSWTEE3380 pKa = 3.69 SLVPNSQTDD3389 pKa = 3.33 NLSYY3393 pKa = 11.5 VFFGSDD3399 pKa = 3.52 FNDD3402 pKa = 3.54 TVNQTGTIGDD3412 pKa = 3.87 DD3413 pKa = 3.68 VMVGSATGEE3422 pKa = 4.16 SFLAGQGDD3430 pKa = 4.16 DD3431 pKa = 4.07 QILTKK3436 pKa = 10.85 GGLDD3440 pKa = 3.26 VVYY3443 pKa = 10.34 AGPGDD3448 pKa = 3.84 DD3449 pKa = 3.49 WVSVSDD3455 pKa = 3.6 TYY3457 pKa = 10.98 FRR3459 pKa = 11.84 RR3460 pKa = 11.84 LNGGTGFDD3468 pKa = 3.26 ILALQGYY3475 pKa = 8.94 NGQNWDD3481 pKa = 4.22 LTTLSPGLRR3490 pKa = 11.84 LQDD3493 pKa = 4.1 FEE3495 pKa = 4.99 TIDD3498 pKa = 3.34 IRR3500 pKa = 11.84 DD3501 pKa = 3.56 YY3502 pKa = 11.39 GANQLTLNSLSVINLSSNNTVIVLMDD3528 pKa = 3.66 EE3529 pKa = 4.83 SGDD3532 pKa = 4.04 SLQLSSDD3539 pKa = 3.98 FGADD3543 pKa = 2.95 GTTYY3547 pKa = 10.5 QYY3549 pKa = 11.45 GQRR3552 pKa = 11.84 FYY3554 pKa = 11.04 QYY3556 pKa = 10.94 KK3557 pKa = 9.69 SNNSAAIVLVNQPTMPSFTAPSQNKK3582 pKa = 7.64 PQPVLPNGNGTSNTAALNTNIANTGNANTGNFNDD3616 pKa = 4.0 EE3617 pKa = 4.59 NINTGNANTGNFNNGNTNTGNVGDD3641 pKa = 4.41 INIATKK3647 pKa = 10.75 LFVSSPTASEE3657 pKa = 3.9 ALGEE3661 pKa = 4.05 VDD3663 pKa = 4.26 FTIEE3667 pKa = 4.08 RR3668 pKa = 11.84 TGDD3671 pKa = 3.07 LDD3673 pKa = 3.73 KK3674 pKa = 11.51 YY3675 pKa = 10.87 VVVSYY3680 pKa = 8.04 LTQDD3684 pKa = 3.1 MDD3686 pKa = 3.72 GKK3688 pKa = 10.88 AGDD3691 pKa = 3.94 RR3692 pKa = 11.84 YY3693 pKa = 10.9 LPVAGQLVFKK3703 pKa = 10.58 PGEE3706 pKa = 4.02 TKK3708 pKa = 9.22 KK3709 pKa = 9.22 TIKK3712 pKa = 10.74 VKK3714 pKa = 10.69 VPNDD3718 pKa = 3.69 SIYY3721 pKa = 11.01 TGDD3724 pKa = 3.57 KK3725 pKa = 10.67 QFGLLVSLLEE3735 pKa = 4.7 EE3736 pKa = 4.68 GLQPGNGEE3744 pKa = 3.88 QAFFLAADD3752 pKa = 3.94 ANGSQIRR3759 pKa = 11.84 NWNYY3763 pKa = 10.76 LPGEE3767 pKa = 4.34 SANSLTGGVINFSTTVNAGQALVKK3791 pKa = 10.59 LDD3793 pKa = 3.73 VNGLAEE3799 pKa = 4.37 FNDD3802 pKa = 3.92 FGSYY3806 pKa = 10.82 NPVAGNYY3813 pKa = 7.82 EE3814 pKa = 4.28 SLMLNGMTGAKK3825 pKa = 7.86 FTNFDD3830 pKa = 4.23 NEE3832 pKa = 4.15 NNPQGLEE3839 pKa = 3.95 LQLWDD3844 pKa = 4.41 GDD3846 pKa = 3.91 RR3847 pKa = 11.84 GDD3849 pKa = 5.66 ADD3851 pKa = 3.68 GLTNGLVQTKK3861 pKa = 9.99 GYY3863 pKa = 8.97 LGRR3866 pKa = 11.84 VIPGLISNDD3875 pKa = 2.87 NRR3877 pKa = 11.84 VFWAPTSADD3886 pKa = 3.21 GQVQLRR3892 pKa = 11.84 LINSPNQNYY3901 pKa = 9.79 AMGWIEE3907 pKa = 4.35 VDD3909 pKa = 3.77 DD3910 pKa = 4.4 TNGSIDD3916 pKa = 4.09 GLLPDD3921 pKa = 4.66 DD3922 pKa = 4.85 PSYY3925 pKa = 11.0 EE3926 pKa = 3.97 AAALARR3932 pKa = 11.84 KK3933 pKa = 8.89 QLIFSDD3939 pKa = 3.8 QNGASTKK3946 pKa = 10.84 ALTRR3950 pKa = 11.84 SLAQQSFTNVDD3961 pKa = 3.14 NLIATEE3967 pKa = 4.19 SQFFGDD3973 pKa = 4.36 FSNANLEE3980 pKa = 4.07 PNRR3983 pKa = 11.84 YY3984 pKa = 8.94 YY3985 pKa = 10.23 ILYY3988 pKa = 8.93 SQQGDD3993 pKa = 3.58 EE3994 pKa = 4.49 TTFSIDD4000 pKa = 3.14 TAPIIEE4006 pKa = 4.26 TDD4008 pKa = 2.96 SRR4010 pKa = 11.84 GYY4012 pKa = 10.1 HH4013 pKa = 4.93 QLNFAGITAEE4023 pKa = 4.25 IGSKK4027 pKa = 8.54 TLVVPGVLGQSVTAEE4042 pKa = 3.99 VSISRR4047 pKa = 11.84 AGAYY4051 pKa = 10.23 DD4052 pKa = 3.6 NAIALYY4058 pKa = 10.18 KK4059 pKa = 10.22 VDD4061 pKa = 4.46 SLTGGLDD4068 pKa = 3.64 LNGDD4072 pKa = 3.77 RR4073 pKa = 11.84 QIDD4076 pKa = 4.38 LKK4078 pKa = 10.93 PGDD4081 pKa = 3.51 SGYY4084 pKa = 9.26 TEE4086 pKa = 4.32 AALGRR4091 pKa = 11.84 AQAPLTGVSLTAPDD4105 pKa = 4.3 GFFSTTQQTVNLLGNQMYY4123 pKa = 10.86 GMVIIPNSTIAEE4135 pKa = 4.12 VLSQNPSNDD4144 pKa = 3.46 PNFGPVALFSFNGANHH4160 pKa = 6.39 NGISQMSRR4168 pKa = 11.84 LGSNLFGFEE4177 pKa = 4.19 DD4178 pKa = 3.97 MVGGGDD4184 pKa = 3.61 QDD4186 pKa = 4.15 YY4187 pKa = 11.46 NDD4189 pKa = 6.12 LILQFDD4195 pKa = 4.58 FLPAA4199 pKa = 4.44
Molecular weight: 442.44 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.681
IPC2_protein 3.783
IPC_protein 3.846
Toseland 3.605
ProMoST 4.012
Dawson 3.846
Bjellqvist 3.986
Wikipedia 3.783
Rodwell 3.668
Grimsley 3.516
Solomon 3.834
Lehninger 3.795
Nozaki 3.948
DTASelect 4.228
Thurlkill 3.656
EMBOSS 3.783
Sillero 3.961
Patrickios 1.278
IPC_peptide 3.834
IPC2_peptide 3.948
IPC2.peptide.svr19 3.862
Protein with the highest isoelectric point:
>sp|Q55005|RNPA_SYNY3 Ribonuclease P protein component OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rnpA PE=3 SV=1
MM1 pKa = 6.61 TQRR4 pKa = 11.84 TLGGTNRR11 pKa = 11.84 KK12 pKa = 7.61 QKK14 pKa = 8.99 RR15 pKa = 11.84 TSGFRR20 pKa = 11.84 ARR22 pKa = 11.84 MRR24 pKa = 11.84 THH26 pKa = 6.89 NGRR29 pKa = 11.84 KK30 pKa = 9.01 VIQARR35 pKa = 11.84 RR36 pKa = 11.84 SKK38 pKa = 10.4 GRR40 pKa = 11.84 HH41 pKa = 4.61 RR42 pKa = 11.84 LAVV45 pKa = 3.37
Molecular weight: 5.26 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.523
IPC2_protein 11.242
IPC_protein 12.837
Toseland 13.013
ProMoST 13.495
Dawson 13.013
Bjellqvist 12.998
Wikipedia 13.481
Rodwell 12.647
Grimsley 13.042
Solomon 13.495
Lehninger 13.408
Nozaki 12.998
DTASelect 12.998
Thurlkill 12.998
EMBOSS 13.51
Sillero 12.998
Patrickios 12.369
IPC_peptide 13.51
IPC2_peptide 12.486
IPC2.peptide.svr19 9.185
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3507
1
3508
1123132
29
4199
320.2
35.56
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.408 ± 0.044
1.014 ± 0.016
5.051 ± 0.035
6.085 ± 0.045
4.007 ± 0.028
7.301 ± 0.054
1.886 ± 0.024
6.292 ± 0.033
4.265 ± 0.043
11.398 ± 0.052
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.984 ± 0.021
4.077 ± 0.043
5.109 ± 0.038
5.572 ± 0.039
5.075 ± 0.045
5.86 ± 0.035
5.502 ± 0.046
6.628 ± 0.033
1.552 ± 0.022
2.933 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here