Ctenophore-associated circular virus 1

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A141MJA6|A0A141MJA6_9VIRU Uncharacterized protein OS=Ctenophore-associated circular virus 1 OX=1778558 PE=4 SV=1
MM1 pKa = 7.14ATSEE5 pKa = 4.13TSEE8 pKa = 4.38TSGGPPPSGTFRR20 pKa = 11.84AICFTEE26 pKa = 5.28FGDD29 pKa = 4.07PPDD32 pKa = 3.6WDD34 pKa = 4.06VVQHH38 pKa = 6.44KK39 pKa = 10.04LRR41 pKa = 11.84FMAYY45 pKa = 9.97GLEE48 pKa = 4.34TCPTTQRR55 pKa = 11.84EE56 pKa = 4.58HH57 pKa = 5.77YY58 pKa = 10.25QGFAYY63 pKa = 10.02AHH65 pKa = 6.7KK66 pKa = 10.09PMRR69 pKa = 11.84WKK71 pKa = 10.12AWKK74 pKa = 10.01KK75 pKa = 9.43LFPRR79 pKa = 11.84AHH81 pKa = 6.13FEE83 pKa = 3.85KK84 pKa = 10.25MAGSFQDD91 pKa = 3.41NVVYY95 pKa = 10.48CSKK98 pKa = 10.51QSSLIKK104 pKa = 10.51FGEE107 pKa = 4.18EE108 pKa = 3.54PKK110 pKa = 10.6QGEE113 pKa = 4.39RR114 pKa = 11.84KK115 pKa = 10.14DD116 pKa = 5.07LIDD119 pKa = 4.46LKK121 pKa = 11.04RR122 pKa = 11.84KK123 pKa = 9.85LEE125 pKa = 4.27EE126 pKa = 3.65YY127 pKa = 10.45APRR130 pKa = 11.84RR131 pKa = 11.84GTTTYY136 pKa = 11.21DD137 pKa = 3.24VAEE140 pKa = 4.6DD141 pKa = 3.36EE142 pKa = 5.35AYY144 pKa = 9.76FGVVARR150 pKa = 11.84HH151 pKa = 4.75NTFASGYY158 pKa = 8.79LRR160 pKa = 11.84HH161 pKa = 6.26KK162 pKa = 9.7RR163 pKa = 11.84AKK165 pKa = 9.74ILNGDD170 pKa = 3.15RR171 pKa = 11.84TMPKK175 pKa = 8.56VYY177 pKa = 10.47VRR179 pKa = 11.84IGPPGTGKK187 pKa = 8.13TRR189 pKa = 11.84WLDD192 pKa = 3.31RR193 pKa = 11.84KK194 pKa = 9.97FGVGGYY200 pKa = 9.89VIAPDD205 pKa = 3.69NTGKK209 pKa = 9.72WFDD212 pKa = 3.85GCDD215 pKa = 3.23HH216 pKa = 7.2DD217 pKa = 6.45VILFDD222 pKa = 5.59DD223 pKa = 4.22VEE225 pKa = 4.81IDD227 pKa = 3.57QVPPLSLWKK236 pKa = 9.9RR237 pKa = 11.84LCDD240 pKa = 3.6RR241 pKa = 11.84YY242 pKa = 10.39PFEE245 pKa = 4.62VPVKK249 pKa = 10.65GGFITWKK256 pKa = 9.0PRR258 pKa = 11.84VIVFTSNHH266 pKa = 6.08AVHH269 pKa = 6.69EE270 pKa = 4.25WWKK273 pKa = 10.97DD274 pKa = 3.1ITPDD278 pKa = 3.36NQQAIARR285 pKa = 11.84RR286 pKa = 11.84IYY288 pKa = 8.89KK289 pKa = 8.55TVYY292 pKa = 10.41VDD294 pKa = 3.49GTDD297 pKa = 3.39GDD299 pKa = 4.0EE300 pKa = 4.34TQEE303 pKa = 4.0EE304 pKa = 4.47FQSDD308 pKa = 3.97EE309 pKa = 4.23DD310 pKa = 4.24SEE312 pKa = 4.46GAEE315 pKa = 4.17EE316 pKa = 4.78GRR318 pKa = 11.84AA319 pKa = 3.4

Molecular weight: 36.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A141MJA6|A0A141MJA6_9VIRU Uncharacterized protein OS=Ctenophore-associated circular virus 1 OX=1778558 PE=4 SV=1
MM1 pKa = 7.09KK2 pKa = 10.09RR3 pKa = 11.84KK4 pKa = 9.62RR5 pKa = 11.84SSSQTRR11 pKa = 11.84TVKK14 pKa = 9.9VRR16 pKa = 11.84KK17 pKa = 9.17KK18 pKa = 10.1AAPKK22 pKa = 10.13TMTAQRR28 pKa = 11.84RR29 pKa = 11.84LIRR32 pKa = 11.84RR33 pKa = 11.84MILKK37 pKa = 7.76TTEE40 pKa = 3.95TKK42 pKa = 10.87YY43 pKa = 9.72KK44 pKa = 10.2TIALDD49 pKa = 3.55KK50 pKa = 11.27EE51 pKa = 4.42EE52 pKa = 4.59IYY54 pKa = 10.9HH55 pKa = 5.76NKK57 pKa = 10.21LYY59 pKa = 10.97NFSKK63 pKa = 10.82NLLEE67 pKa = 4.25VFPSQGTGDD76 pKa = 3.84GARR79 pKa = 11.84EE80 pKa = 3.74GDD82 pKa = 3.96EE83 pKa = 4.05IVTTGMKK90 pKa = 10.09VRR92 pKa = 11.84MILGQKK98 pKa = 9.07SDD100 pKa = 4.11RR101 pKa = 11.84PNVSYY106 pKa = 10.62KK107 pKa = 10.28VWVVHH112 pKa = 6.3YY113 pKa = 10.56DD114 pKa = 3.44DD115 pKa = 4.53STSGNAITYY124 pKa = 10.61GNFFHH129 pKa = 6.92NVTGNGMLDD138 pKa = 3.08AVQNKK143 pKa = 8.65RR144 pKa = 11.84FKK146 pKa = 10.43VLKK149 pKa = 10.55AFTIKK154 pKa = 10.8SKK156 pKa = 9.6GTTIEE161 pKa = 3.9AGEE164 pKa = 4.08TSKK167 pKa = 11.26EE168 pKa = 3.68FVRR171 pKa = 11.84PVKK174 pKa = 10.54FWIPFKK180 pKa = 10.9KK181 pKa = 10.03KK182 pKa = 10.52LKK184 pKa = 9.91FVSDD188 pKa = 4.3ASNKK192 pKa = 9.88ASNILPQMNVIVLPYY207 pKa = 10.05DD208 pKa = 3.47AYY210 pKa = 10.35GTLGTDD216 pKa = 4.01NIAYY220 pKa = 7.58MQGSCTLYY228 pKa = 11.06YY229 pKa = 10.38KK230 pKa = 10.8DD231 pKa = 3.73PP232 pKa = 4.34

Molecular weight: 26.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

551

232

319

275.5

31.48

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.989 ± 0.237

1.089 ± 0.404

6.534 ± 1.101

5.808 ± 1.185

5.082 ± 0.474

7.623 ± 0.711

2.178 ± 0.544

4.719 ± 0.544

9.256 ± 1.729

5.082 ± 0.585

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.359 ± 0.669

3.448 ± 1.324

5.082 ± 1.004

3.267 ± 0.153

6.352 ± 0.46

5.082 ± 0.85

7.804 ± 0.767

6.897 ± 0.265

1.996 ± 0.697

4.356 ± 0.237
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski