Candidatus Aquirickettsiella gammari

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Candidatus Aquirickettsiella

Average proteome isoelectric point is 7.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1375 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A370CG80|A0A370CG80_9COXI DM13 domain-containing protein OS=Candidatus Aquirickettsiella gammari OX=2016198 GN=CFE62_005880 PE=4 SV=1
MM1 pKa = 7.72CLLCGYY7 pKa = 10.55VYY9 pKa = 10.68DD10 pKa = 4.78EE11 pKa = 4.26EE12 pKa = 5.33KK13 pKa = 10.62GWEE16 pKa = 4.07EE17 pKa = 4.53DD18 pKa = 3.35GVAAGTRR25 pKa = 11.84WEE27 pKa = 4.57DD28 pKa = 3.55VPLTWRR34 pKa = 11.84CPEE37 pKa = 4.22CGAMKK42 pKa = 10.32EE43 pKa = 3.97DD44 pKa = 3.89FEE46 pKa = 4.48MVEE49 pKa = 4.0II50 pKa = 4.86

Molecular weight: 5.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A370CIR6|A0A370CIR6_9COXI DNA helicase OS=Candidatus Aquirickettsiella gammari OX=2016198 GN=CFE62_002800 PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.44RR3 pKa = 11.84TYY5 pKa = 10.32QPSNLKK11 pKa = 10.19RR12 pKa = 11.84KK13 pKa = 7.57RR14 pKa = 11.84THH16 pKa = 5.9GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.2KK26 pKa = 10.6GRR28 pKa = 11.84LILKK32 pKa = 9.67RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.51GRR39 pKa = 11.84LRR41 pKa = 11.84LTAA44 pKa = 4.67

Molecular weight: 5.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1375

0

1375

444153

27

2853

323.0

36.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.293 ± 0.062

1.16 ± 0.023

4.425 ± 0.045

5.449 ± 0.076

4.374 ± 0.049

5.965 ± 0.079

2.333 ± 0.034

7.576 ± 0.049

6.293 ± 0.07

12.177 ± 0.094

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.991 ± 0.026

4.577 ± 0.053

4.135 ± 0.042

4.826 ± 0.055

4.763 ± 0.056

6.462 ± 0.05

5.101 ± 0.063

5.679 ± 0.06

1.118 ± 0.023

3.304 ± 0.037
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski