Beihai picorna-like virus 7

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.48

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KHJ6|A0A1L3KHJ6_9VIRU Uncharacterized protein OS=Beihai picorna-like virus 7 OX=1922616 PE=4 SV=1
MM1 pKa = 7.68PVLDD5 pKa = 5.6SIPEE9 pKa = 4.04NDD11 pKa = 5.7DD12 pKa = 3.62VLQCDD17 pKa = 3.44TRR19 pKa = 11.84LIKK22 pKa = 10.55PEE24 pKa = 4.25LFRR27 pKa = 11.84CATSGFTPQSGEE39 pKa = 3.51VDD41 pKa = 3.43QTVTQAPEE49 pKa = 4.06GTVEE53 pKa = 4.28QIVAFDD59 pKa = 3.79DD60 pKa = 5.05QEE62 pKa = 4.89AGWMKK67 pKa = 10.57DD68 pKa = 2.72ASGQFDD74 pKa = 3.57STMDD78 pKa = 3.9LVDD81 pKa = 5.7KK82 pKa = 11.21SDD84 pKa = 3.58TDD86 pKa = 3.59LGAFLGRR93 pKa = 11.84PVKK96 pKa = 10.15IDD98 pKa = 3.17TQAWVVGQPLYY109 pKa = 10.79KK110 pKa = 10.37QINPWEE116 pKa = 4.19LFVTHH121 pKa = 7.16PAMANKK127 pKa = 9.49LAHH130 pKa = 6.09YY131 pKa = 8.65EE132 pKa = 3.91LLRR135 pKa = 11.84GNLNVKK141 pKa = 9.33VVISGTGFHH150 pKa = 6.78YY151 pKa = 10.7GRR153 pKa = 11.84TLVSYY158 pKa = 10.89NPLNGYY164 pKa = 10.17DD165 pKa = 3.64EE166 pKa = 5.71ASVTRR171 pKa = 11.84NFIDD175 pKa = 3.21QDD177 pKa = 4.26LIAASQRR184 pKa = 11.84PCIFLNPTDD193 pKa = 3.78NSGGQMKK200 pKa = 10.7LPFFFLQNYY209 pKa = 6.72MSLSKK214 pKa = 10.93GDD216 pKa = 3.68YY217 pKa = 10.16RR218 pKa = 11.84DD219 pKa = 3.69MGVLDD224 pKa = 3.94YY225 pKa = 11.4KK226 pKa = 11.39SFGNLLHH233 pKa = 7.16ANGGDD238 pKa = 3.41DD239 pKa = 3.46PVYY242 pKa = 8.81ITTYY246 pKa = 10.61AWMTEE251 pKa = 4.12TSLTMPTSITSTITLQNEE269 pKa = 4.39TVDD272 pKa = 3.67PDD274 pKa = 4.04VFPLGPPYY282 pKa = 10.79GVGNGAEE289 pKa = 4.24NGVGPPFSPQSGFQPQAGGKK309 pKa = 9.46PNMKK313 pKa = 9.92KK314 pKa = 10.47SNKK317 pKa = 9.38LQSKK321 pKa = 9.87GNARR325 pKa = 11.84GKK327 pKa = 10.69AKK329 pKa = 10.76LNTGDD334 pKa = 4.34EE335 pKa = 4.37YY336 pKa = 11.47GQGIISAPASAVAKK350 pKa = 9.79AAGMLTSIPFIEE362 pKa = 5.27PYY364 pKa = 10.83ARR366 pKa = 11.84ATQMVASKK374 pKa = 9.83VGQVASIFGYY384 pKa = 9.93SRR386 pKa = 11.84PAVVSDD392 pKa = 4.31FLLQKK397 pKa = 10.27PSPTGNFANVDD408 pKa = 2.99ASDD411 pKa = 3.4AVNRR415 pKa = 11.84LTLDD419 pKa = 3.34SKK421 pKa = 11.18QEE423 pKa = 3.6ITIDD427 pKa = 3.46SRR429 pKa = 11.84TVGLDD434 pKa = 3.14GGDD437 pKa = 3.23QMAFDD442 pKa = 5.29NIQTRR447 pKa = 11.84EE448 pKa = 4.0SYY450 pKa = 9.07LTSFTMSSTDD460 pKa = 3.43APDD463 pKa = 4.79AILWNSYY470 pKa = 7.16VTPNLFGINNPEE482 pKa = 3.75LHH484 pKa = 5.63MTPMAMLAQYY494 pKa = 9.79FSAWQGTIKK503 pKa = 10.4FRR505 pKa = 11.84FQIVKK510 pKa = 10.78SNFHH514 pKa = 6.83KK515 pKa = 10.83GRR517 pKa = 11.84ILVRR521 pKa = 11.84YY522 pKa = 8.91DD523 pKa = 3.43PRR525 pKa = 11.84SHH527 pKa = 7.29SSDD530 pKa = 3.08VNYY533 pKa = 6.9TTNYY537 pKa = 9.87SRR539 pKa = 11.84VIDD542 pKa = 4.62LATEE546 pKa = 4.1DD547 pKa = 4.3DD548 pKa = 4.39FEE550 pKa = 6.08IEE552 pKa = 4.36IGWGQNVPFLGNQQANVSRR571 pKa = 11.84VYY573 pKa = 11.02YY574 pKa = 10.51GGTRR578 pKa = 11.84LTTDD582 pKa = 2.57SGGNHH587 pKa = 6.38NGVIEE592 pKa = 4.32VNVVNSLVAPAADD605 pKa = 3.22SDD607 pKa = 3.4IRR609 pKa = 11.84INVFVSAGDD618 pKa = 3.53DD619 pKa = 3.88MKK621 pKa = 10.47WGRR624 pKa = 11.84PNPDD628 pKa = 3.45KK629 pKa = 10.82IRR631 pKa = 11.84NLHH634 pKa = 5.83YY635 pKa = 10.45FPATAPPLNEE645 pKa = 4.21FQPQSGMGGDD655 pKa = 4.13LSGTTGDD662 pKa = 3.9SATDD666 pKa = 3.36RR667 pKa = 11.84PTEE670 pKa = 4.04ADD672 pKa = 3.21NVPSVGCPADD682 pKa = 4.64DD683 pKa = 3.79DD684 pKa = 5.15HH685 pKa = 8.17MMDD688 pKa = 3.32VFFGEE693 pKa = 4.46MPVSLRR699 pKa = 11.84EE700 pKa = 3.47IFRR703 pKa = 11.84RR704 pKa = 11.84YY705 pKa = 9.36VFEE708 pKa = 4.65KK709 pKa = 10.48YY710 pKa = 9.6FVPTAPTADD719 pKa = 3.62GALTTSNYY727 pKa = 9.76RR728 pKa = 11.84IKK730 pKa = 10.73SFPFHH735 pKa = 7.46SGDD738 pKa = 4.51DD739 pKa = 3.84PDD741 pKa = 5.26GLDD744 pKa = 3.42VKK746 pKa = 11.24SDD748 pKa = 3.31GLRR751 pKa = 11.84YY752 pKa = 9.83NQVQTSPIAFFAPCFAGWRR771 pKa = 11.84GSLRR775 pKa = 11.84HH776 pKa = 5.65KK777 pKa = 9.7WVFSGEE783 pKa = 4.3SLQSPLISNYY793 pKa = 10.05GFIAANGAQSTEE805 pKa = 3.8WTVTNDD811 pKa = 3.19LEE813 pKa = 4.58AEE815 pKa = 4.28KK816 pKa = 10.44FLSATFGKK824 pKa = 10.24FSNGGSAGTNLGVNNTIEE842 pKa = 4.29TEE844 pKa = 3.89MPYY847 pKa = 11.02YY848 pKa = 10.23NGNRR852 pKa = 11.84FSSSRR857 pKa = 11.84ILSADD862 pKa = 3.33NNSSYY867 pKa = 11.04SYY869 pKa = 10.26QVEE872 pKa = 4.87TIQSKK877 pKa = 9.68SVPSGPVPSVVTRR890 pKa = 11.84DD891 pKa = 2.88AFYY894 pKa = 11.03RR895 pKa = 11.84MCAAGEE901 pKa = 4.07DD902 pKa = 3.81FTLFFWTGVPIMYY915 pKa = 9.9NYY917 pKa = 10.35SRR919 pKa = 11.84TYY921 pKa = 9.9TSS923 pKa = 2.9

Molecular weight: 101.06 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KHM6|A0A1L3KHM6_9VIRU Uncharacterized protein OS=Beihai picorna-like virus 7 OX=1922616 PE=4 SV=1
MM1 pKa = 7.09GQSPCTWANRR11 pKa = 11.84PNKK14 pKa = 8.87TLYY17 pKa = 10.62FVMFQINSKK26 pKa = 8.97TKK28 pKa = 10.52LDD30 pKa = 3.53VSSARR35 pKa = 11.84GRR37 pKa = 11.84KK38 pKa = 8.2SKK40 pKa = 10.39SYY42 pKa = 10.6RR43 pKa = 11.84GTLQGLRR50 pKa = 11.84IQQCLFVGAGWFLTSYY66 pKa = 10.01MPIRR70 pKa = 11.84EE71 pKa = 4.29CTTLSFEE78 pKa = 4.09GLSYY82 pKa = 11.0DD83 pKa = 3.45FQLFVPLFRR92 pKa = 11.84PTCDD96 pKa = 3.01FVVALYY102 pKa = 10.78VEE104 pKa = 4.56EE105 pKa = 4.42LADD108 pKa = 3.7VQSKK112 pKa = 9.22VVLQSDD118 pKa = 4.06APDD121 pKa = 3.27SFQYY125 pKa = 10.9LFSGKK130 pKa = 8.44SHH132 pKa = 7.06SLTKK136 pKa = 9.76MVPYY140 pKa = 9.84YY141 pKa = 11.15GKK143 pKa = 10.3GQRR146 pKa = 11.84ADD148 pKa = 3.32IIKK151 pKa = 9.66CDD153 pKa = 3.72EE154 pKa = 3.91MALVYY159 pKa = 10.31GINKK163 pKa = 9.73YY164 pKa = 10.07ILPKK168 pKa = 10.41FSFFRR173 pKa = 11.84FKK175 pKa = 10.03THH177 pKa = 5.98LCEE180 pKa = 4.1VCKK183 pKa = 11.01SNVNGRR189 pKa = 11.84VTYY192 pKa = 10.44GVLAYY197 pKa = 10.49HH198 pKa = 6.82KK199 pKa = 8.47TQDD202 pKa = 2.94WKK204 pKa = 11.02RR205 pKa = 11.84GNKK208 pKa = 9.87LGGLRR213 pKa = 11.84VYY215 pKa = 9.38TQGTLSATYY224 pKa = 10.26KK225 pKa = 10.55RR226 pKa = 11.84LRR228 pKa = 3.69

Molecular weight: 26.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

2764

228

1613

921.3

103.43

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.368 ± 0.549

1.23 ± 0.477

6.766 ± 0.672

4.522 ± 0.681

6.006 ± 0.205

6.766 ± 0.931

1.7 ± 0.235

5.174 ± 0.686

5.644 ± 1.046

8.068 ± 0.864

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.075 ± 0.309

4.957 ± 0.672

4.848 ± 0.758

3.654 ± 0.567

4.667 ± 0.429

8.466 ± 0.153

5.861 ± 0.743

6.838 ± 0.15

1.447 ± 0.085

3.944 ± 0.532
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski