Hubei unio douglasiae virus 1

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.31

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KGU5|A0A1L3KGU5_9VIRU Capsid protein beta OS=Hubei unio douglasiae virus 1 OX=1923321 PE=4 SV=1
MM1 pKa = 7.15TLAGEE6 pKa = 4.7GFLKK10 pKa = 10.81CAFAPPDD17 pKa = 3.95FNSDD21 pKa = 3.11AGRR24 pKa = 11.84GIPDD28 pKa = 3.95DD29 pKa = 3.85FQGKK33 pKa = 8.95VLTRR37 pKa = 11.84KK38 pKa = 9.97DD39 pKa = 3.6VLTTSLSYY47 pKa = 11.02GAGQDD52 pKa = 3.47VYY54 pKa = 11.01ILVAPTPGISYY65 pKa = 8.84WYY67 pKa = 10.32ASVANGASLSGTAFRR82 pKa = 11.84PNPYY86 pKa = 9.24PGYY89 pKa = 10.07RR90 pKa = 11.84SLFGDD95 pKa = 3.59TGLEE99 pKa = 3.81RR100 pKa = 11.84ANNVTSFRR108 pKa = 11.84YY109 pKa = 10.03ASTCVGLYY117 pKa = 6.81PTSNMQQFAGSISVWKK133 pKa = 10.35FPMEE137 pKa = 5.3LINQIVGVGTPVVGQPCWVLNGTDD161 pKa = 3.3NFSGIGYY168 pKa = 9.76EE169 pKa = 4.02NYY171 pKa = 9.3TDD173 pKa = 4.07SFIKK177 pKa = 10.54GMYY180 pKa = 8.48SQSVCNEE187 pKa = 3.51PDD189 pKa = 3.15FEE191 pKa = 4.13FRR193 pKa = 11.84PIIEE197 pKa = 4.88EE198 pKa = 3.59IGAIPSGVITATQAGMFCTFATSQPAAGQLCGIVGMGTMDD238 pKa = 5.36CILIKK243 pKa = 10.7VATPVGATNSAVLKK257 pKa = 8.96TWACVEE263 pKa = 3.93YY264 pKa = 10.66RR265 pKa = 11.84PNTNSALYY273 pKa = 10.06SYY275 pKa = 10.91AHH277 pKa = 7.35DD278 pKa = 4.3SPAPDD283 pKa = 4.07LMALAAYY290 pKa = 10.19RR291 pKa = 11.84EE292 pKa = 4.13IAKK295 pKa = 9.59NVPIAVPCSQNEE307 pKa = 4.43GFWKK311 pKa = 10.25RR312 pKa = 11.84VLTILRR318 pKa = 11.84GGLSLTSKK326 pKa = 10.48IPGPIGMTATGVSGIMDD343 pKa = 4.46MMTGLATT350 pKa = 3.64

Molecular weight: 37.16 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KGU5|A0A1L3KGU5_9VIRU Capsid protein beta OS=Hubei unio douglasiae virus 1 OX=1923321 PE=4 SV=1
MM1 pKa = 7.65DD2 pKa = 4.36QFIEE6 pKa = 4.56CYY8 pKa = 9.74YY9 pKa = 10.35IEE11 pKa = 6.13LIFCTIILYY20 pKa = 10.23LVLVLQRR27 pKa = 11.84VKK29 pKa = 10.92EE30 pKa = 4.23KK31 pKa = 10.65ILASHH36 pKa = 6.49WNKK39 pKa = 10.15KK40 pKa = 7.17KK41 pKa = 10.43QRR43 pKa = 11.84ALTAQHH49 pKa = 6.3ISTRR53 pKa = 11.84VVRR56 pKa = 11.84YY57 pKa = 9.46ASATLRR63 pKa = 11.84TRR65 pKa = 11.84FQRR68 pKa = 11.84QMEE71 pKa = 4.32RR72 pKa = 11.84VHH74 pKa = 7.31SSVRR78 pKa = 11.84VGHH81 pKa = 5.49SHH83 pKa = 6.15QSAASEE89 pKa = 4.14RR90 pKa = 11.84NSATEE95 pKa = 3.5TMLAVVRR102 pKa = 11.84KK103 pKa = 9.77LGMIPYY109 pKa = 9.33VISPSPRR116 pKa = 11.84EE117 pKa = 3.85KK118 pKa = 10.92DD119 pKa = 3.07CDD121 pKa = 4.29GIRR124 pKa = 11.84DD125 pKa = 4.21YY126 pKa = 10.85YY127 pKa = 10.51TLADD131 pKa = 4.59LRR133 pKa = 11.84CQTKK137 pKa = 10.45NDD139 pKa = 5.17PITDD143 pKa = 3.27NHH145 pKa = 6.88VIIMTDD151 pKa = 2.23VDD153 pKa = 4.41YY154 pKa = 11.05YY155 pKa = 11.87VNMDD159 pKa = 4.48EE160 pKa = 4.65ILSHH164 pKa = 6.05GRR166 pKa = 11.84PVLLYY171 pKa = 8.36TFQPTKK177 pKa = 10.51VAGPVKK183 pKa = 10.41NGYY186 pKa = 7.72FTIEE190 pKa = 4.31HH191 pKa = 6.47DD192 pKa = 3.57TVTYY196 pKa = 9.76HH197 pKa = 6.38VKK199 pKa = 10.18GGKK202 pKa = 8.57DD203 pKa = 3.28VKK205 pKa = 10.8HH206 pKa = 6.48KK207 pKa = 9.64IWNYY211 pKa = 10.44SVDD214 pKa = 3.76TIYY217 pKa = 10.87TPNIVSGWFEE227 pKa = 4.4TYY229 pKa = 10.16FYY231 pKa = 10.85AITDD235 pKa = 3.79TLGEE239 pKa = 4.27LTPIDD244 pKa = 4.07GFFGLLSGLGKK255 pKa = 8.93LTPFHH260 pKa = 7.19KK261 pKa = 10.48EE262 pKa = 3.44INNFLYY268 pKa = 9.19QTVTVSTIDD277 pKa = 3.12QFYY280 pKa = 10.39LSEE283 pKa = 4.45HH284 pKa = 5.66RR285 pKa = 11.84TITTIVPYY293 pKa = 10.23ARR295 pKa = 11.84CPTDD299 pKa = 4.6IIDD302 pKa = 4.05TLAPATRR309 pKa = 11.84LVRR312 pKa = 11.84MNYY315 pKa = 8.98QVPDD319 pKa = 3.66EE320 pKa = 4.35DD321 pKa = 5.45HH322 pKa = 7.21IEE324 pKa = 4.28PKK326 pKa = 10.34NDD328 pKa = 2.91LRR330 pKa = 11.84FNCLVHH336 pKa = 8.51ISDD339 pKa = 4.11SGPNISVGIAGEE351 pKa = 4.18LAQATLPLSLFEE363 pKa = 4.58SLRR366 pKa = 11.84TAHH369 pKa = 6.63SLAKK373 pKa = 10.31ARR375 pKa = 11.84ALSDD379 pKa = 3.18TVRR382 pKa = 11.84RR383 pKa = 11.84SKK385 pKa = 11.21LDD387 pKa = 3.56NNEE390 pKa = 4.03SATLHH395 pKa = 6.2CFLTGVQKK403 pKa = 9.37STPDD407 pKa = 3.19IVHH410 pKa = 6.14SPGLFSRR417 pKa = 11.84HH418 pKa = 5.42FNSVDD423 pKa = 3.49QQDD426 pKa = 3.53DD427 pKa = 4.29TIPYY431 pKa = 10.57DD432 pKa = 3.33NGKK435 pKa = 10.39EE436 pKa = 4.05YY437 pKa = 10.99ARR439 pKa = 11.84DD440 pKa = 3.68YY441 pKa = 11.65APGPLSDD448 pKa = 3.36TAVFPTEE455 pKa = 4.07SSNNDD460 pKa = 2.85KK461 pKa = 10.33ATIRR465 pKa = 11.84GRR467 pKa = 11.84IDD469 pKa = 2.87IPQRR473 pKa = 11.84IANGTQYY480 pKa = 10.81IKK482 pKa = 10.73PQFLKK487 pKa = 10.33FAHH490 pKa = 6.29EE491 pKa = 4.3FVSIILKK498 pKa = 8.57NTTEE502 pKa = 4.4RR503 pKa = 11.84LGQPYY508 pKa = 10.69SNDD511 pKa = 3.24YY512 pKa = 11.02VIEE515 pKa = 4.21KK516 pKa = 9.87QNKK519 pKa = 6.96PRR521 pKa = 11.84QRR523 pKa = 11.84QRR525 pKa = 11.84NDD527 pKa = 2.57QGLFHH532 pKa = 7.38VIDD535 pKa = 3.92KK536 pKa = 10.1FVVRR540 pKa = 11.84AFQKK544 pKa = 10.26RR545 pKa = 11.84EE546 pKa = 3.82AYY548 pKa = 10.23NGPNYY553 pKa = 9.21PRR555 pKa = 11.84NISTVPGYY563 pKa = 10.99HH564 pKa = 5.35NTRR567 pKa = 11.84LSGFTYY573 pKa = 10.42AFKK576 pKa = 10.82DD577 pKa = 3.44AVLRR581 pKa = 11.84THH583 pKa = 7.41DD584 pKa = 3.54WYY586 pKa = 11.1QPCRR590 pKa = 11.84TPEE593 pKa = 3.97EE594 pKa = 3.75IAANVHH600 pKa = 6.37ALAQKK605 pKa = 10.47HH606 pKa = 5.46EE607 pKa = 4.3YY608 pKa = 10.19LVEE611 pKa = 3.87TDD613 pKa = 3.42YY614 pKa = 11.89SKK616 pKa = 11.44FDD618 pKa = 3.42GTVTRR623 pKa = 11.84WIRR626 pKa = 11.84EE627 pKa = 3.97NVEE630 pKa = 4.24FPCYY634 pKa = 9.93LRR636 pKa = 11.84WVAPEE641 pKa = 4.57HH642 pKa = 6.81RR643 pKa = 11.84DD644 pKa = 3.58EE645 pKa = 5.99LNTLLLSEE653 pKa = 5.12LDD655 pKa = 4.16APGTTNTISYY665 pKa = 10.75SPGCSRR671 pKa = 11.84LSGSPLTTDD680 pKa = 4.26GNTICNAFVSYY691 pKa = 10.51CAARR695 pKa = 11.84SMKK698 pKa = 9.13YY699 pKa = 8.7TEE701 pKa = 5.2AEE703 pKa = 3.97AFSDD707 pKa = 4.13IGLCYY712 pKa = 10.5GDD714 pKa = 4.55DD715 pKa = 3.81GLRR718 pKa = 11.84GGNVANTKK726 pKa = 9.33LRR728 pKa = 11.84KK729 pKa = 8.5IASRR733 pKa = 11.84LGFDD737 pKa = 4.45LRR739 pKa = 11.84VCNRR743 pKa = 11.84AKK745 pKa = 10.61AGSPVSFLSRR755 pKa = 11.84VFADD759 pKa = 3.75PWTSPASIQSPLRR772 pKa = 11.84TLLKK776 pKa = 10.05IHH778 pKa = 5.65TTVDD782 pKa = 2.95RR783 pKa = 11.84RR784 pKa = 11.84TKK786 pKa = 10.64LSVVGAAKK794 pKa = 7.23TTAYY798 pKa = 10.67LVTDD802 pKa = 3.28SRR804 pKa = 11.84TPFISDD810 pKa = 3.01WCRR813 pKa = 11.84AYY815 pKa = 10.7QKK817 pKa = 10.45AAKK820 pKa = 8.52AQPVANFNDD829 pKa = 3.94LDD831 pKa = 5.33DD832 pKa = 4.1IPFWVLDD839 pKa = 3.99TDD841 pKa = 4.27NLAHH845 pKa = 7.34PWPQDD850 pKa = 3.36DD851 pKa = 4.55PEE853 pKa = 5.82NYY855 pKa = 8.66MDD857 pKa = 4.99IVATEE862 pKa = 4.16LGITASEE869 pKa = 4.08LSDD872 pKa = 4.21HH873 pKa = 6.95IKK875 pKa = 10.75LLNEE879 pKa = 3.86YY880 pKa = 9.89SGDD883 pKa = 3.77VAGLPVLQTTIDD895 pKa = 3.72QTPKK899 pKa = 10.42LAVVLDD905 pKa = 4.17GEE907 pKa = 4.48IHH909 pKa = 7.21AGPNLQDD916 pKa = 4.27DD917 pKa = 4.54SNKK920 pKa = 10.46HH921 pKa = 5.05GIARR925 pKa = 11.84QDD927 pKa = 3.29VPVAQHH933 pKa = 5.95RR934 pKa = 11.84RR935 pKa = 11.84SGAVEE940 pKa = 3.8RR941 pKa = 11.84EE942 pKa = 3.66NRR944 pKa = 11.84ARR946 pKa = 11.84PPHH949 pKa = 6.49VSTAPRR955 pKa = 11.84RR956 pKa = 11.84GPQSNYY962 pKa = 9.43PRR964 pKa = 11.84GSTNPHH970 pKa = 6.51KK971 pKa = 10.44DD972 pKa = 3.11SKK974 pKa = 11.13EE975 pKa = 3.82RR976 pKa = 11.84TDD978 pKa = 3.71PVSSKK983 pKa = 10.58HH984 pKa = 6.08RR985 pKa = 11.84GADD988 pKa = 3.04QTHH991 pKa = 6.61PPKK994 pKa = 10.86CEE996 pKa = 3.73ANGRR1000 pKa = 11.84RR1001 pKa = 11.84SGKK1004 pKa = 7.94TRR1006 pKa = 11.84GRR1008 pKa = 11.84TGKK1011 pKa = 10.61SNAATDD1017 pKa = 3.78QSNHH1021 pKa = 4.71GSAAGGRR1028 pKa = 11.84QSKK1031 pKa = 7.98ITQGLAKK1038 pKa = 9.75TDD1040 pKa = 3.31

Molecular weight: 116.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1544

154

1040

514.7

57.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.578 ± 0.697

1.619 ± 0.397

5.894 ± 1.041

4.275 ± 0.615

3.368 ± 0.711

6.412 ± 1.633

2.591 ± 0.989

5.829 ± 0.183

4.534 ± 0.613

8.355 ± 1.918

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.813 ± 1.081

4.793 ± 0.124

5.829 ± 0.453

4.016 ± 0.522

5.959 ± 1.129

7.124 ± 0.214

8.225 ± 0.081

6.736 ± 0.418

1.101 ± 0.156

3.951 ± 0.422
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski