Capybara microvirus Cap3_SP_441

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W5X1|A0A4P8W5X1_9VIRU Nonstructural protein OS=Capybara microvirus Cap3_SP_441 OX=2585453 PE=4 SV=1
MM1 pKa = 7.35SRR3 pKa = 11.84NEE5 pKa = 3.64LAYY8 pKa = 10.03EE9 pKa = 4.04VLDD12 pKa = 4.63TIDD15 pKa = 3.87TPRR18 pKa = 11.84STWQRR23 pKa = 11.84NFTHH27 pKa = 5.98KK28 pKa = 9.74TSFNAGKK35 pKa = 10.27LIPFYY40 pKa = 10.25IDD42 pKa = 2.91TDD44 pKa = 4.38IIPGTTIKK52 pKa = 10.78NKK54 pKa = 7.91TSIVIRR60 pKa = 11.84MSTPIAPVMDD70 pKa = 4.2NLYY73 pKa = 10.83LDD75 pKa = 4.06TYY77 pKa = 10.16YY78 pKa = 10.85FKK80 pKa = 10.92CSKK83 pKa = 9.39FWYY86 pKa = 8.05WEE88 pKa = 3.68HH89 pKa = 6.45FRR91 pKa = 11.84AQMGEE96 pKa = 4.08NNQSAWTQTIEE107 pKa = 4.47YY108 pKa = 9.45IEE110 pKa = 4.36PQIKK114 pKa = 8.49MLSMEE119 pKa = 4.1YY120 pKa = 10.41GANDD124 pKa = 3.34VACYY128 pKa = 9.56MGMPINVANLEE139 pKa = 4.18WSKK142 pKa = 11.35LPVQAYY148 pKa = 9.67IDD150 pKa = 3.21IWNNWFRR157 pKa = 11.84DD158 pKa = 3.68EE159 pKa = 4.63NLQAPITLDD168 pKa = 3.21KK169 pKa = 11.01TDD171 pKa = 4.44ADD173 pKa = 4.01LTADD177 pKa = 3.42ATINTGFGLLPVCKK191 pKa = 9.86FHH193 pKa = 8.39DD194 pKa = 4.49YY195 pKa = 8.25FTSLLPQPQKK205 pKa = 11.38GEE207 pKa = 4.09AVTMPLGVAAPVSGTVKK224 pKa = 10.85GNGLQLGVTNGTTNFVPTTRR244 pKa = 11.84GSNYY248 pKa = 10.22ASNTFGDD255 pKa = 4.02SLGSFSEE262 pKa = 4.34FTPGGTKK269 pKa = 9.9TYY271 pKa = 10.66GVTPDD276 pKa = 3.36EE277 pKa = 4.69SKK279 pKa = 10.89SGLVIGTAYY288 pKa = 10.71ADD290 pKa = 3.79LTSATAATFNALRR303 pKa = 11.84LAGATQRR310 pKa = 11.84ILEE313 pKa = 4.15KK314 pKa = 10.39DD315 pKa = 3.0ARR317 pKa = 11.84FGTRR321 pKa = 11.84YY322 pKa = 10.0PEE324 pKa = 4.04FLKK327 pKa = 10.96GQYY330 pKa = 10.34GVTAADD336 pKa = 3.67EE337 pKa = 4.4CLLIPEE343 pKa = 4.23YY344 pKa = 10.85LGGKK348 pKa = 9.42RR349 pKa = 11.84IPINIEE355 pKa = 3.84QVCQTSSTDD364 pKa = 3.15STSPLGEE371 pKa = 4.06TGAMSVTADD380 pKa = 3.13INEE383 pKa = 4.73DD384 pKa = 3.43FTKK387 pKa = 10.84SFTKK391 pKa = 10.11HH392 pKa = 6.27DD393 pKa = 3.95FLIGVCCVRR402 pKa = 11.84AEE404 pKa = 3.94HH405 pKa = 6.96TYY407 pKa = 9.94QQGIPLQFKK416 pKa = 9.92RR417 pKa = 11.84KK418 pKa = 9.03RR419 pKa = 11.84RR420 pKa = 11.84LDD422 pKa = 3.49TYY424 pKa = 10.51HH425 pKa = 7.55PSLAHH430 pKa = 6.92IGNQPVYY437 pKa = 10.03NFEE440 pKa = 4.34IFAQGNSTDD449 pKa = 4.19DD450 pKa = 3.11EE451 pKa = 4.97VMGYY455 pKa = 9.92KK456 pKa = 9.81EE457 pKa = 3.85AWQEE461 pKa = 3.68YY462 pKa = 9.17LYY464 pKa = 10.9KK465 pKa = 10.26PNRR468 pKa = 11.84ISGQMLSTYY477 pKa = 7.29TQSLDD482 pKa = 2.93VWHH485 pKa = 6.74YY486 pKa = 10.96GDD488 pKa = 5.8DD489 pKa = 4.11YY490 pKa = 12.05VNLPVLSSEE499 pKa = 4.47WIVEE503 pKa = 3.72PTEE506 pKa = 4.26YY507 pKa = 9.51IDD509 pKa = 3.24RR510 pKa = 11.84TLAVSSSVSNQFWADD525 pKa = 2.99IYY527 pKa = 10.83IEE529 pKa = 4.41QIVSAPIPINRR540 pKa = 11.84VPGLIDD546 pKa = 3.56HH547 pKa = 6.51YY548 pKa = 11.72

Molecular weight: 61.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W8K7|A0A4P8W8K7_9VIRU Replication initiator protein OS=Capybara microvirus Cap3_SP_441 OX=2585453 PE=4 SV=1
MM1 pKa = 7.81HH2 pKa = 6.78YY3 pKa = 10.63NCRR6 pKa = 11.84KK7 pKa = 10.19NKK9 pKa = 9.67GLQEE13 pKa = 4.04QNSIMLSVGTNKK25 pKa = 10.22SSGRR29 pKa = 11.84VPTFFIKK36 pKa = 10.46EE37 pKa = 4.06SRR39 pKa = 11.84EE40 pKa = 4.09MVCLNPITAWKK51 pKa = 10.23KK52 pKa = 10.41KK53 pKa = 10.11FITLGTNPQFYY64 pKa = 9.92EE65 pKa = 4.09YY66 pKa = 10.3EE67 pKa = 3.91KK68 pKa = 10.7KK69 pKa = 10.28IRR71 pKa = 11.84FKK73 pKa = 11.33NPNDD77 pKa = 3.38EE78 pKa = 4.15NFEE81 pKa = 4.24QIQLPCGKK89 pKa = 10.1CLGCRR94 pKa = 11.84LDD96 pKa = 5.06HH97 pKa = 6.61ANAWATRR104 pKa = 11.84IMLEE108 pKa = 4.43AKK110 pKa = 9.95NHH112 pKa = 5.5EE113 pKa = 4.52KK114 pKa = 10.79NCFITLTYY122 pKa = 10.3NPKK125 pKa = 10.11NLPLTEE131 pKa = 4.15TGKK134 pKa = 8.13MTLKK138 pKa = 10.7KK139 pKa = 10.44SDD141 pKa = 2.96IQKK144 pKa = 9.2FFKK147 pKa = 10.53RR148 pKa = 11.84LRR150 pKa = 11.84EE151 pKa = 3.95KK152 pKa = 10.34TKK154 pKa = 10.84LKK156 pKa = 10.71LSYY159 pKa = 9.68FCCGEE164 pKa = 3.78YY165 pKa = 10.73GPRR168 pKa = 11.84TFRR171 pKa = 11.84PHH173 pKa = 3.87YY174 pKa = 8.84HH175 pKa = 6.92AIIFGYY181 pKa = 10.14EE182 pKa = 3.78PSDD185 pKa = 3.33LKK187 pKa = 11.24LRR189 pKa = 11.84AFSKK193 pKa = 9.71TNQKK197 pKa = 9.07MFEE200 pKa = 4.15SEE202 pKa = 4.36EE203 pKa = 3.97LLKK206 pKa = 10.09TWGLGFITIEE216 pKa = 3.75EE217 pKa = 4.53LNYY220 pKa = 9.19KK221 pKa = 6.61TACYY225 pKa = 7.13TARR228 pKa = 11.84YY229 pKa = 6.98VQKK232 pKa = 10.82KK233 pKa = 10.37AGLKK237 pKa = 8.07TNSRR241 pKa = 11.84KK242 pKa = 8.33FTGATEE248 pKa = 4.21TKK250 pKa = 10.14IKK252 pKa = 9.98IDD254 pKa = 3.38EE255 pKa = 4.35RR256 pKa = 11.84TGDD259 pKa = 3.79EE260 pKa = 4.19YY261 pKa = 11.63LSTINKK267 pKa = 9.75LKK269 pKa = 10.08TEE271 pKa = 3.95KK272 pKa = 10.17FDD274 pKa = 3.3NYY276 pKa = 10.37GRR278 pKa = 11.84EE279 pKa = 3.87KK280 pKa = 10.93EE281 pKa = 4.29FIVMSKK287 pKa = 10.44KK288 pKa = 9.99PAIGLNYY295 pKa = 9.38WLEE298 pKa = 4.15NKK300 pKa = 9.98EE301 pKa = 3.95KK302 pKa = 10.32ILRR305 pKa = 11.84NKK307 pKa = 10.19GILIKK312 pKa = 9.9IDD314 pKa = 3.45EE315 pKa = 4.53TVKK318 pKa = 10.68LKK320 pKa = 10.27PIPRR324 pKa = 11.84YY325 pKa = 8.98FEE327 pKa = 5.41KK328 pKa = 10.44IMEE331 pKa = 4.45RR332 pKa = 11.84EE333 pKa = 3.98NKK335 pKa = 7.57EE336 pKa = 3.82TLDD339 pKa = 3.65RR340 pKa = 11.84LKK342 pKa = 10.87HH343 pKa = 4.97EE344 pKa = 4.57KK345 pKa = 10.36KK346 pKa = 10.67EE347 pKa = 3.97NFIKK351 pKa = 10.67NQEE354 pKa = 4.37LIVKK358 pKa = 9.85KK359 pKa = 10.32IKK361 pKa = 10.94NNFKK365 pKa = 10.66LCEE368 pKa = 4.0EE369 pKa = 4.3LTNDD373 pKa = 4.32EE374 pKa = 4.09KK375 pKa = 10.91TKK377 pKa = 10.38IYY379 pKa = 11.14NNYY382 pKa = 9.54LNKK385 pKa = 10.46NLTNRR390 pKa = 11.84AKK392 pKa = 10.11YY393 pKa = 10.2LKK395 pKa = 10.17RR396 pKa = 11.84GQII399 pKa = 3.58

Molecular weight: 47.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1389

77

548

277.8

31.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.479 ± 1.306

1.368 ± 0.404

4.896 ± 1.011

7.631 ± 1.562

4.536 ± 0.376

6.551 ± 1.251

1.512 ± 0.246

6.695 ± 0.49

9.719 ± 2.68

7.415 ± 0.72

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.52 ± 0.391

6.911 ± 0.77

3.6 ± 0.925

3.6 ± 0.523

3.744 ± 0.533

5.688 ± 1.15

7.919 ± 0.928

3.384 ± 0.976

1.152 ± 0.423

4.68 ± 0.424
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski