Conexivisphaera calida

Taxonomy: cellular organisms; Archaea; TACK group; Thaumarchaeota; Conexivisphaeri

Average proteome isoelectric point is 6.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1603 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P2VNS0|A0A4P2VNS0_9ARCH Molybdenum cofactor biosynthesis protein MoaC OS=Conexivisphaera calida OX=1874277 GN=NAS2_1166 PE=4 SV=1
MM1 pKa = 7.6LGALILIVIVLVGAFIVYY19 pKa = 9.95SYY21 pKa = 10.84VWSASGRR28 pKa = 11.84ITGAPGVMVSGASLTALPGGGGYY51 pKa = 7.21MTVDD55 pKa = 3.19ITNTGGVTGFASVAVYY71 pKa = 10.45SSSGQVFSAPGAPGLLYY88 pKa = 10.21QIYY91 pKa = 9.47YY92 pKa = 9.88IPTAWYY98 pKa = 9.78QPDD101 pKa = 3.47PTAVYY106 pKa = 10.32SAGLAAGSSFSSDD119 pKa = 2.29GFTWVASAGPWTTAQSGSSQNVNGQTQPNVIDD151 pKa = 4.02NLQAGYY157 pKa = 10.47SGGAPFPNPPVANGWDD173 pKa = 3.11AYY175 pKa = 10.33AIKK178 pKa = 10.39EE179 pKa = 3.74IGYY182 pKa = 9.48VVVTQPTTFYY192 pKa = 11.37VDD194 pKa = 2.8IDD196 pKa = 3.81GGLLSVEE203 pKa = 4.48PLSQGGASLTNWLGTGSNPGNLINQWRR230 pKa = 11.84GEE232 pKa = 3.98GATQYY237 pKa = 11.23SSNTVQPGTYY247 pKa = 9.64LIEE250 pKa = 4.25YY251 pKa = 9.74DD252 pKa = 3.51WFNGGGPAYY261 pKa = 10.39FSLWTNNPVQYY272 pKa = 10.54YY273 pKa = 10.19SPLQIAPGQVANEE286 pKa = 4.44SYY288 pKa = 10.33TVGSGIAPGDD298 pKa = 3.79TYY300 pKa = 11.08TVVVTLTTPRR310 pKa = 11.84GTATSSATVVASPP323 pKa = 4.18

Molecular weight: 33.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P2VBB3|A0A4P2VBB3_9ARCH FIG006285: ICC-like protein phosphoesterase OS=Conexivisphaera calida OX=1874277 GN=NAS2_0436 PE=4 SV=1
MM1 pKa = 7.48KK2 pKa = 10.57GKK4 pKa = 10.21GVQVWKK10 pKa = 10.13YY11 pKa = 8.62YY12 pKa = 10.11KK13 pKa = 10.53VEE15 pKa = 4.26GGTLTRR21 pKa = 11.84LRR23 pKa = 11.84RR24 pKa = 11.84EE25 pKa = 4.46CPRR28 pKa = 11.84CGPGVFMAQHH38 pKa = 7.28ADD40 pKa = 3.15RR41 pKa = 11.84LYY43 pKa = 10.8CGRR46 pKa = 11.84CGHH49 pKa = 5.79TMWLSSSSGSKK60 pKa = 10.42SSGQRR65 pKa = 11.84GTGRR69 pKa = 11.84GRR71 pKa = 11.84RR72 pKa = 11.84QQ73 pKa = 2.83

Molecular weight: 8.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1603

0

1603

468978

37

1935

292.6

32.0

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.185 ± 0.076

0.666 ± 0.023

5.052 ± 0.05

6.841 ± 0.077

3.107 ± 0.034

9.09 ± 0.052

1.609 ± 0.024

5.19 ± 0.038

3.081 ± 0.057

10.146 ± 0.072

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.809 ± 0.028

2.241 ± 0.04

5.092 ± 0.046

1.815 ± 0.031

8.104 ± 0.094

7.128 ± 0.076

4.193 ± 0.067

8.91 ± 0.056

1.232 ± 0.029

3.509 ± 0.048
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski