Falsochrobactrum ovis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Brucellaceae; Falsochrobactrum

Average proteome isoelectric point is 6.47

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3123 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A364JU96|A0A364JU96_9RHIZ Monosaccharide ABC transporter membrane protein (CUT2 family) OS=Falsochrobactrum ovis OX=1293442 GN=C7374_10842 PE=4 SV=1
MM1 pKa = 7.52GVDD4 pKa = 3.71QPYY7 pKa = 10.65LGNFDD12 pKa = 4.1YY13 pKa = 11.13DD14 pKa = 3.82SDD16 pKa = 4.75LEE18 pKa = 4.36PPLAAEE24 pKa = 4.33ATAICATFLSSDD36 pKa = 3.2AMSGLFIKK44 pKa = 10.43QMHH47 pKa = 7.13DD48 pKa = 3.46GQIKK52 pKa = 9.83

Molecular weight: 5.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A364JTJ3|A0A364JTJ3_9RHIZ Phage tail tube protein OS=Falsochrobactrum ovis OX=1293442 GN=C7374_111100 PE=4 SV=1
MM1 pKa = 7.7RR2 pKa = 11.84NFVAVQFSNLQSGAVRR18 pKa = 11.84TGNGCRR24 pKa = 11.84WQGWGFPVCNLEE36 pKa = 4.24HH37 pKa = 6.44GRR39 pKa = 11.84SLLAVIRR46 pKa = 11.84FILSGFRR53 pKa = 11.84GFASVLQNSPDD64 pKa = 3.36RR65 pKa = 11.84VPYY68 pKa = 9.32MLQSQSPAFVSFQIVPYY85 pKa = 9.78DD86 pKa = 3.88LKK88 pKa = 10.84PSEE91 pKa = 5.47GFLAWGAKK99 pKa = 9.63NFSQWNINWLRR110 pKa = 11.84SAKK113 pKa = 10.22LL114 pKa = 3.25

Molecular weight: 12.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3123

0

3123

950354

29

2860

304.3

33.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.827 ± 0.053

0.799 ± 0.015

5.586 ± 0.037

6.152 ± 0.046

3.976 ± 0.029

7.953 ± 0.052

2.011 ± 0.02

6.436 ± 0.03

4.191 ± 0.035

9.838 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.553 ± 0.02

3.433 ± 0.027

4.678 ± 0.028

3.443 ± 0.028

6.33 ± 0.046

5.986 ± 0.033

5.178 ± 0.032

6.912 ± 0.034

1.248 ± 0.018

2.468 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski