Morganella morganii (Proteus morganii)
Average proteome isoelectric point is 6.62
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 24 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1W6JPE9|A0A1W6JPE9_MORMO Uncharacterized protein OS=Morganella morganii OX=582 PE=4 SV=1
MM1 pKa = 7.96 RR2 pKa = 11.84 DD3 pKa = 3.62 YY4 pKa = 10.69 PVSSLVTEE12 pKa = 4.32 SMTNGSSVSGFIPEE26 pKa = 4.31 LSIINALYY34 pKa = 10.23 YY35 pKa = 9.77 PQSQQPAGDD44 pKa = 3.97 LCAHH48 pKa = 6.27 TEE50 pKa = 4.1 KK51 pKa = 10.61 QSPSQPQQ58 pKa = 2.77
Molecular weight: 6.29 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 4.426
IPC2_protein 4.736
IPC_protein 4.38
Toseland 4.253
ProMoST 4.52
Dawson 4.342
Bjellqvist 4.507
Wikipedia 4.253
Rodwell 4.24
Grimsley 4.177
Solomon 4.317
Lehninger 4.279
Nozaki 4.482
DTASelect 4.584
Thurlkill 4.291
EMBOSS 4.266
Sillero 4.507
Patrickios 0.604
IPC_peptide 4.329
IPC2_peptide 4.495
IPC2.peptide.svr19 4.439
Protein with the highest isoelectric point:
>tr|A0A0A2R831|A0A0A2R831_MORMO Uncharacterized protein OS=Morganella morganii OX=582 GN=LR61_14145 PE=4 SV=1
MM1 pKa = 6.92 RR2 pKa = 11.84 TYY4 pKa = 11.06 RR5 pKa = 11.84 KK6 pKa = 7.45 TKK8 pKa = 10.01 PITATVTGTVTKK20 pKa = 9.92 PPQRR24 pKa = 11.84 VRR26 pKa = 11.84 TATGKK31 pKa = 10.59 VMATMTIQAEE41 pKa = 4.31 SEE43 pKa = 4.08 RR44 pKa = 11.84 RR45 pKa = 11.84 SPYY48 pKa = 9.45 PLKK51 pKa = 10.87 LVAFDD56 pKa = 3.95 MNALEE61 pKa = 6.03 LMTCQRR67 pKa = 11.84 GSRR70 pKa = 11.84 VIATGRR76 pKa = 11.84 HH77 pKa = 4.31 EE78 pKa = 4.38 WFNGYY83 pKa = 8.47 QLTGAQIVTCC93 pKa = 4.78
Molecular weight: 10.42 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.339
IPC2_protein 9.736
IPC_protein 10.467
Toseland 10.599
ProMoST 10.277
Dawson 10.73
Bjellqvist 10.438
Wikipedia 10.921
Rodwell 10.994
Grimsley 10.774
Solomon 10.818
Lehninger 10.789
Nozaki 10.599
DTASelect 10.423
Thurlkill 10.613
EMBOSS 10.994
Sillero 10.657
Patrickios 10.76
IPC_peptide 10.818
IPC2_peptide 9.516
IPC2.peptide.svr19 8.465
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
24
0
24
4746
56
904
197.8
21.87
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
9.84 ± 0.577
1.138 ± 0.247
6.089 ± 0.276
5.921 ± 0.422
3.055 ± 0.312
7.29 ± 0.69
1.749 ± 0.283
6.511 ± 0.426
6.321 ± 0.406
8.365 ± 0.492
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.781 ± 0.273
5.162 ± 0.617
3.708 ± 0.331
4.193 ± 0.387
5.626 ± 0.674
6.679 ± 0.462
5.563 ± 0.423
5.794 ± 0.268
1.433 ± 0.181
2.781 ± 0.16
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here