Alloprevotella tannerae ATCC 51259

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella; Alloprevotella tannerae

Average proteome isoelectric point is 7.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2806 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C9LCY4|C9LCY4_9BACT Transcriptional regulator LuxR family OS=Alloprevotella tannerae ATCC 51259 OX=626522 GN=GCWU000325_00012 PE=4 SV=1
MM1 pKa = 7.47KK2 pKa = 10.2KK3 pKa = 10.24YY4 pKa = 10.61RR5 pKa = 11.84CTVCDD10 pKa = 3.17WVYY13 pKa = 11.26DD14 pKa = 4.1PEE16 pKa = 6.66LGDD19 pKa = 4.1PDD21 pKa = 5.1AGIAPGTAFEE31 pKa = 5.18DD32 pKa = 4.05LPDD35 pKa = 4.92DD36 pKa = 4.95FVCPLCGVGKK46 pKa = 10.48EE47 pKa = 4.08DD48 pKa = 4.9FEE50 pKa = 5.35PIEE53 pKa = 4.37DD54 pKa = 3.55

Molecular weight: 5.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C9LH25|C9LH25_9BACT Uncharacterized protein OS=Alloprevotella tannerae ATCC 51259 OX=626522 GN=GCWU000325_01526 PE=4 SV=1
MM1 pKa = 7.58RR2 pKa = 11.84KK3 pKa = 9.32SRR5 pKa = 11.84AAKK8 pKa = 9.71RR9 pKa = 11.84LSIRR13 pKa = 11.84SASKK17 pKa = 8.74GTNVSLSPPFKK28 pKa = 10.13LKK30 pKa = 10.93KK31 pKa = 10.54NIAQLKK37 pKa = 8.97KK38 pKa = 10.01SQHH41 pKa = 5.02KK42 pKa = 6.89TAKK45 pKa = 9.94NAQKK49 pKa = 10.53RR50 pKa = 11.84NKK52 pKa = 9.45NN53 pKa = 3.33

Molecular weight: 5.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2806

0

2806

747103

39

2467

266.3

29.99

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.062 ± 0.056

1.385 ± 0.019

5.397 ± 0.037

6.069 ± 0.056

4.706 ± 0.035

6.629 ± 0.045

2.045 ± 0.023

6.395 ± 0.046

6.413 ± 0.048

9.753 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.499 ± 0.025

4.509 ± 0.044

3.905 ± 0.026

3.766 ± 0.034

5.569 ± 0.051

5.911 ± 0.037

5.736 ± 0.041

6.162 ± 0.04

1.088 ± 0.015

4.002 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski