Amino acid dipepetide frequency for Bat badicivirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.953AlaAla: 4.953 ± 0.695
1.238AlaCys: 1.238 ± 0.002
3.302AlaAsp: 3.302 ± 0.454
6.603AlaGlu: 6.603 ± 0.22
4.54AlaPhe: 4.54 ± 0.236
7.016AlaGly: 7.016 ± 0.448
0.413AlaHis: 0.413 ± 0.459
3.302AlaIle: 3.302 ± 0.234
2.889AlaLys: 2.889 ± 0.225
8.254AlaLeu: 8.254 ± 0.446
2.064AlaMet: 2.064 ± 0.456
3.714AlaAsn: 3.714 ± 2.07
2.064AlaPro: 2.064 ± 0.232
2.476AlaGln: 2.476 ± 0.684
2.476AlaArg: 2.476 ± 0.004
6.191AlaSer: 6.191 ± 2.762
5.778AlaThr: 5.778 ± 0.926
6.191AlaVal: 6.191 ± 0.679
2.064AlaTrp: 2.064 ± 1.144
1.651AlaTyr: 1.651 ± 0.461
0.0AlaXaa: 0.0 ± 0.0
Cys
0.825CysAla: 0.825 ± 0.458
0.0CysCys: 0.0 ± 0.0
0.825CysAsp: 0.825 ± 0.458
0.413CysGlu: 0.413 ± 0.229
0.0CysPhe: 0.0 ± 0.0
0.825CysGly: 0.825 ± 0.458
0.0CysHis: 0.0 ± 0.0
0.0CysIle: 0.0 ± 0.0
0.413CysLys: 0.413 ± 0.229
1.238CysLeu: 1.238 ± 0.686
0.0CysMet: 0.0 ± 0.0
0.825CysAsn: 0.825 ± 0.231
1.238CysPro: 1.238 ± 0.002
1.651CysGln: 1.651 ± 0.227
1.238CysArg: 1.238 ± 0.686
1.238CysSer: 1.238 ± 0.002
0.413CysThr: 0.413 ± 0.229
1.238CysVal: 1.238 ± 0.686
0.825CysTrp: 0.825 ± 0.231
0.413CysTyr: 0.413 ± 0.459
0.0CysXaa: 0.0 ± 0.0
Asp
6.603AspAla: 6.603 ± 1.596
0.413AspCys: 0.413 ± 0.229
4.54AspAsp: 4.54 ± 0.452
5.365AspGlu: 5.365 ± 1.598
2.476AspPhe: 2.476 ± 0.004
0.825AspGly: 0.825 ± 0.231
1.651AspHis: 1.651 ± 0.227
1.651AspIle: 1.651 ± 0.227
3.714AspLys: 3.714 ± 1.371
5.365AspLeu: 5.365 ± 1.155
2.064AspMet: 2.064 ± 1.144
1.651AspAsn: 1.651 ± 0.227
3.302AspPro: 3.302 ± 0.922
1.651AspGln: 1.651 ± 0.227
2.064AspArg: 2.064 ± 0.232
2.476AspSer: 2.476 ± 0.684
3.302AspThr: 3.302 ± 0.922
4.127AspVal: 4.127 ± 1.599
0.825AspTrp: 0.825 ± 0.458
2.889AspTyr: 2.889 ± 1.151
0.0AspXaa: 0.0 ± 0.0
Glu
2.889GluAla: 2.889 ± 0.225
1.238GluCys: 1.238 ± 0.002
4.953GluAsp: 4.953 ± 2.745
3.302GluGlu: 3.302 ± 0.454
2.889GluPhe: 2.889 ± 0.225
2.064GluGly: 2.064 ± 0.456
0.413GluHis: 0.413 ± 0.459
1.238GluIle: 1.238 ± 0.002
3.714GluLys: 3.714 ± 0.683
4.127GluLeu: 4.127 ± 0.911
2.889GluMet: 2.889 ± 0.225
2.064GluAsn: 2.064 ± 0.456
2.064GluPro: 2.064 ± 1.144
5.778GluGln: 5.778 ± 0.926
2.064GluArg: 2.064 ± 1.144
3.714GluSer: 3.714 ± 0.694
2.476GluThr: 2.476 ± 1.38
3.302GluVal: 3.302 ± 1.142
0.825GluTrp: 0.825 ± 0.458
2.889GluTyr: 2.889 ± 0.225
0.0GluXaa: 0.0 ± 0.0
Phe
3.302PheAla: 3.302 ± 0.922
0.413PheCys: 0.413 ± 0.459
3.714PheAsp: 3.714 ± 0.683
4.54PheGlu: 4.54 ± 0.452
2.064PhePhe: 2.064 ± 0.456
4.54PheGly: 4.54 ± 0.924
1.651PheHis: 1.651 ± 1.149
3.714PheIle: 3.714 ± 1.371
1.651PheLys: 1.651 ± 0.461
4.127PheLeu: 4.127 ± 0.223
0.413PheMet: 0.413 ± 0.459
3.714PheAsn: 3.714 ± 0.694
1.651PhePro: 1.651 ± 0.461
0.825PheGln: 0.825 ± 0.231
3.302PheArg: 3.302 ± 1.142
5.778PheSer: 5.778 ± 0.45
3.302PheThr: 3.302 ± 0.234
2.476PheVal: 2.476 ± 0.684
1.238PheTrp: 1.238 ± 0.002
1.651PheTyr: 1.651 ± 0.461
0.0PheXaa: 0.0 ± 0.0
Gly
3.302GlyAla: 3.302 ± 0.922
0.413GlyCys: 0.413 ± 0.229
4.54GlyAsp: 4.54 ± 0.452
2.476GlyGlu: 2.476 ± 0.684
4.127GlyPhe: 4.127 ± 1.599
4.953GlyGly: 4.953 ± 1.369
1.651GlyHis: 1.651 ± 0.461
3.714GlyIle: 3.714 ± 0.683
2.889GlyLys: 2.889 ± 0.913
4.127GlyLeu: 4.127 ± 0.223
0.825GlyMet: 0.825 ± 0.458
4.54GlyAsn: 4.54 ± 2.3
1.238GlyPro: 1.238 ± 0.686
2.889GlyGln: 2.889 ± 0.913
4.953GlyArg: 4.953 ± 0.007
4.127GlySer: 4.127 ± 1.153
5.365GlyThr: 5.365 ± 0.467
6.191GlyVal: 6.191 ± 1.367
0.413GlyTrp: 0.413 ± 0.229
1.651GlyTyr: 1.651 ± 0.461
0.0GlyXaa: 0.0 ± 0.0
His
0.825HisAla: 0.825 ± 0.458
0.0HisCys: 0.0 ± 0.0
1.238HisAsp: 1.238 ± 0.686
1.651HisGlu: 1.651 ± 0.227
2.064HisPhe: 2.064 ± 0.456
2.064HisGly: 2.064 ± 0.456
0.0HisHis: 0.0 ± 0.0
2.064HisIle: 2.064 ± 0.921
0.825HisLys: 0.825 ± 0.231
0.413HisLeu: 0.413 ± 0.229
0.413HisMet: 0.413 ± 0.229
0.0HisAsn: 0.0 ± 0.0
2.476HisPro: 2.476 ± 0.004
0.413HisGln: 0.413 ± 0.229
0.825HisArg: 0.825 ± 0.458
1.651HisSer: 1.651 ± 1.149
1.651HisThr: 1.651 ± 0.461
2.064HisVal: 2.064 ± 1.609
0.825HisTrp: 0.825 ± 0.919
0.413HisTyr: 0.413 ± 0.229
0.0HisXaa: 0.0 ± 0.0
Ile
3.302IleAla: 3.302 ± 0.234
1.238IleCys: 1.238 ± 0.686
5.365IleAsp: 5.365 ± 0.467
0.825IleGlu: 0.825 ± 0.231
1.651IlePhe: 1.651 ± 0.915
1.238IleGly: 1.238 ± 0.686
1.238IleHis: 1.238 ± 0.002
1.238IleIle: 1.238 ± 0.002
2.064IleLys: 2.064 ± 0.456
3.714IleLeu: 3.714 ± 0.683
0.413IleMet: 0.413 ± 0.229
1.238IleAsn: 1.238 ± 0.69
3.302IlePro: 3.302 ± 1.611
3.302IleGln: 3.302 ± 1.142
1.651IleArg: 1.651 ± 0.915
7.429IleSer: 7.429 ± 0.699
1.651IleThr: 1.651 ± 0.227
2.064IleVal: 2.064 ± 0.232
1.238IleTrp: 1.238 ± 0.69
2.064IleTyr: 2.064 ± 0.921
0.0IleXaa: 0.0 ± 0.0
Lys
3.714LysAla: 3.714 ± 0.683
0.413LysCys: 0.413 ± 0.229
2.476LysAsp: 2.476 ± 0.684
1.238LysGlu: 1.238 ± 0.002
4.127LysPhe: 4.127 ± 1.153
2.889LysGly: 2.889 ± 0.913
0.0LysHis: 0.0 ± 0.0
2.064LysIle: 2.064 ± 1.144
2.889LysLys: 2.889 ± 0.913
2.476LysLeu: 2.476 ± 0.684
2.064LysMet: 2.064 ± 1.144
1.651LysAsn: 1.651 ± 0.227
2.064LysPro: 2.064 ± 0.456
2.889LysGln: 2.889 ± 0.225
2.476LysArg: 2.476 ± 0.684
2.889LysSer: 2.889 ± 0.225
2.476LysThr: 2.476 ± 1.373
4.54LysVal: 4.54 ± 1.828
0.413LysTrp: 0.413 ± 0.229
0.825LysTyr: 0.825 ± 0.458
0.0LysXaa: 0.0 ± 0.0
Leu
6.603LeuAla: 6.603 ± 1.157
1.651LeuCys: 1.651 ± 0.915
4.54LeuAsp: 4.54 ± 2.3
4.953LeuGlu: 4.953 ± 0.681
2.889LeuPhe: 2.889 ± 0.463
3.714LeuGly: 3.714 ± 0.694
1.651LeuHis: 1.651 ± 0.227
3.714LeuIle: 3.714 ± 0.683
5.365LeuLys: 5.365 ± 1.598
6.191LeuLeu: 6.191 ± 0.679
2.476LeuMet: 2.476 ± 0.004
7.842LeuAsn: 7.842 ± 2.535
3.714LeuPro: 3.714 ± 0.006
3.302LeuGln: 3.302 ± 0.922
3.302LeuArg: 3.302 ± 1.142
5.365LeuSer: 5.365 ± 1.843
3.714LeuThr: 3.714 ± 1.382
7.429LeuVal: 7.429 ± 0.699
1.238LeuTrp: 1.238 ± 0.002
2.064LeuTyr: 2.064 ± 1.144
0.0LeuXaa: 0.0 ± 0.0
Met
3.302MetAla: 3.302 ± 1.611
0.413MetCys: 0.413 ± 0.229
1.651MetAsp: 1.651 ± 0.915
0.825MetGlu: 0.825 ± 0.919
1.651MetPhe: 1.651 ± 0.461
1.238MetGly: 1.238 ± 0.686
0.825MetHis: 0.825 ± 0.458
1.651MetIle: 1.651 ± 0.227
1.238MetLys: 1.238 ± 0.686
1.651MetLeu: 1.651 ± 0.227
0.825MetMet: 0.825 ± 0.458
2.064MetAsn: 2.064 ± 0.232
0.825MetPro: 0.825 ± 0.231
0.413MetGln: 0.413 ± 0.229
1.651MetArg: 1.651 ± 0.227
2.476MetSer: 2.476 ± 1.373
3.302MetThr: 3.302 ± 0.234
1.238MetVal: 1.238 ± 0.002
0.413MetTrp: 0.413 ± 0.229
0.413MetTyr: 0.413 ± 0.459
0.0MetXaa: 0.0 ± 0.0
Asn
4.54AsnAla: 4.54 ± 0.924
0.0AsnCys: 0.0 ± 0.0
0.825AsnAsp: 0.825 ± 0.231
2.476AsnGlu: 2.476 ± 0.684
3.302AsnPhe: 3.302 ± 1.611
3.302AsnGly: 3.302 ± 0.454
1.238AsnHis: 1.238 ± 0.69
2.064AsnIle: 2.064 ± 0.921
2.064AsnLys: 2.064 ± 0.456
5.365AsnLeu: 5.365 ± 3.907
1.651AsnMet: 1.651 ± 1.149
2.064AsnAsn: 2.064 ± 1.609
1.238AsnPro: 1.238 ± 0.69
1.651AsnGln: 1.651 ± 1.149
1.651AsnArg: 1.651 ± 0.227
3.302AsnSer: 3.302 ± 1.611
2.064AsnThr: 2.064 ± 0.232
5.778AsnVal: 5.778 ± 1.614
2.064AsnTrp: 2.064 ± 0.456
2.064AsnTyr: 2.064 ± 0.232
0.0AsnXaa: 0.0 ± 0.0
Pro
1.651ProAla: 1.651 ± 0.915
0.413ProCys: 0.413 ± 0.459
3.302ProAsp: 3.302 ± 0.234
2.889ProGlu: 2.889 ± 1.601
3.302ProPhe: 3.302 ± 0.922
4.953ProGly: 4.953 ± 2.057
1.238ProHis: 1.238 ± 0.686
1.651ProIle: 1.651 ± 0.461
0.825ProLys: 0.825 ± 0.231
6.191ProLeu: 6.191 ± 1.385
1.238ProMet: 1.238 ± 0.002
1.238ProAsn: 1.238 ± 0.69
1.651ProPro: 1.651 ± 1.149
2.476ProGln: 2.476 ± 2.068
2.064ProArg: 2.064 ± 0.232
4.127ProSer: 4.127 ± 0.223
2.889ProThr: 2.889 ± 0.225
2.889ProVal: 2.889 ± 0.463
0.413ProTrp: 0.413 ± 0.229
2.064ProTyr: 2.064 ± 1.609
0.0ProXaa: 0.0 ± 0.0
Gln
4.127GlnAla: 4.127 ± 1.841
0.413GlnCys: 0.413 ± 0.229
2.476GlnAsp: 2.476 ± 0.004
3.302GlnGlu: 3.302 ± 0.454
2.064GlnPhe: 2.064 ± 0.232
0.825GlnGly: 0.825 ± 0.458
2.064GlnHis: 2.064 ± 0.232
2.476GlnIle: 2.476 ± 0.004
0.0GlnLys: 0.0 ± 0.0
4.127GlnLeu: 4.127 ± 1.153
1.238GlnMet: 1.238 ± 0.69
2.064GlnAsn: 2.064 ± 0.456
1.651GlnPro: 1.651 ± 1.149
0.825GlnGln: 0.825 ± 0.458
2.476GlnArg: 2.476 ± 0.684
7.842GlnSer: 7.842 ± 0.47
1.238GlnThr: 1.238 ± 0.002
2.064GlnVal: 2.064 ± 0.456
0.825GlnTrp: 0.825 ± 0.458
0.825GlnTyr: 0.825 ± 0.458
0.0GlnXaa: 0.0 ± 0.0
Arg
5.778ArgAla: 5.778 ± 0.45
0.825ArgCys: 0.825 ± 0.458
2.476ArgAsp: 2.476 ± 1.373
2.064ArgGlu: 2.064 ± 0.456
2.064ArgPhe: 2.064 ± 0.456
2.889ArgGly: 2.889 ± 0.225
1.238ArgHis: 1.238 ± 0.002
3.714ArgIle: 3.714 ± 1.371
2.064ArgLys: 2.064 ± 1.144
3.302ArgLeu: 3.302 ± 0.922
0.825ArgMet: 0.825 ± 0.231
1.651ArgAsn: 1.651 ± 0.227
2.064ArgPro: 2.064 ± 0.232
0.825ArgGln: 0.825 ± 0.231
3.302ArgArg: 3.302 ± 1.142
3.302ArgSer: 3.302 ± 1.83
4.953ArgThr: 4.953 ± 0.681
4.953ArgVal: 4.953 ± 0.681
0.0ArgTrp: 0.0 ± 0.0
2.064ArgTyr: 2.064 ± 0.456
0.0ArgXaa: 0.0 ± 0.0
Ser
7.842SerAla: 7.842 ± 0.906
2.064SerCys: 2.064 ± 0.456
2.476SerAsp: 2.476 ± 0.004
2.889SerGlu: 2.889 ± 0.225
3.714SerPhe: 3.714 ± 1.382
7.429SerGly: 7.429 ± 1.387
2.064SerHis: 2.064 ± 0.456
2.889SerIle: 2.889 ± 0.463
4.127SerLys: 4.127 ± 0.911
6.603SerLeu: 6.603 ± 0.469
3.714SerMet: 3.714 ± 0.694
5.778SerAsn: 5.778 ± 3.679
4.54SerPro: 4.54 ± 0.452
1.238SerGln: 1.238 ± 0.002
3.714SerArg: 3.714 ± 2.059
6.603SerSer: 6.603 ± 0.908
3.714SerThr: 3.714 ± 1.382
6.191SerVal: 6.191 ± 0.697
1.238SerTrp: 1.238 ± 0.686
2.889SerTyr: 2.889 ± 0.225
0.0SerXaa: 0.0 ± 0.0
Thr
4.953ThrAla: 4.953 ± 0.681
1.238ThrCys: 1.238 ± 0.002
2.889ThrAsp: 2.889 ± 1.151
2.476ThrGlu: 2.476 ± 0.684
4.127ThrPhe: 4.127 ± 0.223
4.54ThrGly: 4.54 ± 2.3
1.651ThrHis: 1.651 ± 0.227
1.651ThrIle: 1.651 ± 0.461
1.651ThrLys: 1.651 ± 0.227
4.54ThrLeu: 4.54 ± 0.452
2.064ThrMet: 2.064 ± 0.7
2.476ThrAsn: 2.476 ± 2.068
4.54ThrPro: 4.54 ± 0.236
3.302ThrGln: 3.302 ± 0.922
2.889ThrArg: 2.889 ± 0.225
4.127ThrSer: 4.127 ± 0.465
4.54ThrThr: 4.54 ± 2.989
3.714ThrVal: 3.714 ± 0.694
0.825ThrTrp: 0.825 ± 0.231
1.238ThrTyr: 1.238 ± 0.69
0.0ThrXaa: 0.0 ± 0.0
Val
5.365ValAla: 5.365 ± 1.155
0.413ValCys: 0.413 ± 0.229
3.714ValAsp: 3.714 ± 0.006
4.54ValGlu: 4.54 ± 1.612
2.476ValPhe: 2.476 ± 1.373
5.365ValGly: 5.365 ± 0.467
1.238ValHis: 1.238 ± 1.378
4.953ValIle: 4.953 ± 1.384
4.127ValLys: 4.127 ± 1.599
6.191ValLeu: 6.191 ± 0.679
1.651ValMet: 1.651 ± 0.369
2.064ValAsn: 2.064 ± 1.144
6.191ValPro: 6.191 ± 0.009
4.54ValGln: 4.54 ± 0.236
5.365ValArg: 5.365 ± 0.909
4.54ValSer: 4.54 ± 2.516
3.714ValThr: 3.714 ± 0.006
4.54ValVal: 4.54 ± 0.452
0.413ValTrp: 0.413 ± 0.229
4.127ValTyr: 4.127 ± 1.153
0.0ValXaa: 0.0 ± 0.0
Trp
0.825TrpAla: 0.825 ± 0.458
0.413TrpCys: 0.413 ± 0.229
1.238TrpAsp: 1.238 ± 0.686
0.825TrpGlu: 0.825 ± 0.458
1.238TrpPhe: 1.238 ± 0.686
1.238TrpGly: 1.238 ± 0.686
0.413TrpHis: 0.413 ± 0.229
1.238TrpIle: 1.238 ± 0.686
0.825TrpLys: 0.825 ± 0.231
1.238TrpLeu: 1.238 ± 0.002
0.413TrpMet: 0.413 ± 0.459
0.413TrpAsn: 0.413 ± 0.459
0.413TrpPro: 0.413 ± 0.229
0.0TrpGln: 0.0 ± 0.0
1.238TrpArg: 1.238 ± 0.002
0.825TrpSer: 0.825 ± 0.231
1.651TrpThr: 1.651 ± 0.461
1.238TrpVal: 1.238 ± 0.002
0.413TrpTrp: 0.413 ± 0.229
0.413TrpTyr: 0.413 ± 0.229
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.476TyrAla: 2.476 ± 0.692
0.413TyrCys: 0.413 ± 0.229
0.413TyrAsp: 0.413 ± 0.229
1.238TyrGlu: 1.238 ± 0.686
3.302TyrPhe: 3.302 ± 0.922
2.476TyrGly: 2.476 ± 0.684
1.238TyrHis: 1.238 ± 0.686
1.238TyrIle: 1.238 ± 1.378
1.238TyrLys: 1.238 ± 0.686
2.476TyrLeu: 2.476 ± 2.068
0.413TyrMet: 0.413 ± 0.229
1.651TyrAsn: 1.651 ± 0.227
1.238TyrPro: 1.238 ± 0.002
2.476TyrGln: 2.476 ± 0.684
1.651TyrArg: 1.651 ± 1.837
3.714TyrSer: 3.714 ± 0.006
1.238TyrThr: 1.238 ± 0.69
3.714TyrVal: 3.714 ± 1.382
0.0TyrTrp: 0.0 ± 0.0
1.238TyrTyr: 1.238 ± 0.002
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (2424 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski