Giant panda anellovirus

Taxonomy: Viruses; Anelloviridae; unclassified Anelloviridae

Average proteome isoelectric point is 7.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A220IGG7|A0A220IGG7_9VIRU ORF3 OS=Giant panda anellovirus OX=2016460 PE=4 SV=1
MM1 pKa = 7.39NPNSFHH7 pKa = 6.28GRR9 pKa = 11.84AILQFKK15 pKa = 9.73KK16 pKa = 10.44KK17 pKa = 8.98QALWFQSCSFSHH29 pKa = 7.32KK30 pKa = 10.36LFCQCGDD37 pKa = 3.46WQVHH41 pKa = 4.56LQRR44 pKa = 11.84YY45 pKa = 8.7RR46 pKa = 11.84EE47 pKa = 3.99QQWKK51 pKa = 9.83CITGGGHH58 pKa = 6.47TDD60 pKa = 3.21LGDD63 pKa = 3.11ISFVTEE69 pKa = 4.98DD70 pKa = 4.53GDD72 pKa = 4.21TQGDD76 pKa = 3.7TGGEE80 pKa = 4.01PGGDD84 pKa = 3.45DD85 pKa = 3.34TGGLGG90 pKa = 4.1

Molecular weight: 9.96 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A220IGG9|A0A220IGG9_9VIRU Capsid protein OS=Giant panda anellovirus OX=2016460 PE=3 SV=1
MM1 pKa = 6.11YY2 pKa = 10.0HH3 pKa = 6.88RR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84SYY8 pKa = 9.88RR9 pKa = 11.84PRR11 pKa = 11.84RR12 pKa = 11.84HH13 pKa = 5.84FFRR16 pKa = 11.84HH17 pKa = 5.08RR18 pKa = 11.84RR19 pKa = 11.84WRR21 pKa = 11.84YY22 pKa = 8.2PRR24 pKa = 11.84RR25 pKa = 11.84HH26 pKa = 5.29WRR28 pKa = 11.84RR29 pKa = 11.84AWRR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84YY35 pKa = 9.25RR36 pKa = 11.84RR37 pKa = 11.84PRR39 pKa = 11.84VRR41 pKa = 11.84AIIQQQPRR49 pKa = 11.84RR50 pKa = 11.84KK51 pKa = 9.62KK52 pKa = 9.54ILVVTGWEE60 pKa = 3.69ILGQIGSQLKK70 pKa = 9.67YY71 pKa = 11.01VYY73 pKa = 10.58DD74 pKa = 4.83DD75 pKa = 3.44NTKK78 pKa = 9.59KK79 pKa = 10.45PRR81 pKa = 11.84VEE83 pKa = 4.54VINIAPMNKK92 pKa = 8.26QVKK95 pKa = 9.22YY96 pKa = 10.04LMGMIPQGLANTCSDD111 pKa = 2.86TWTDD115 pKa = 2.85GMKK118 pKa = 10.19RR119 pKa = 11.84RR120 pKa = 11.84EE121 pKa = 3.98EE122 pKa = 4.38GGLGMTGPTHH132 pKa = 6.53WDD134 pKa = 3.6FVGGWGYY141 pKa = 11.67AKK143 pKa = 10.37FDD145 pKa = 3.93LQSLILRR152 pKa = 11.84NLLGMNRR159 pKa = 11.84FSEE162 pKa = 4.45NIRR165 pKa = 11.84TYY167 pKa = 8.14THH169 pKa = 6.47IKK171 pKa = 9.26FLKK174 pKa = 10.4FKK176 pKa = 9.71IQLVPGPSVDD186 pKa = 3.4YY187 pKa = 10.8LFRR190 pKa = 11.84IQQHH194 pKa = 6.62RR195 pKa = 11.84GPQDD199 pKa = 2.93WEE201 pKa = 4.25EE202 pKa = 4.27PLLHH206 pKa = 6.85PAHH209 pKa = 7.14LLNMPFVTWVQSIKK223 pKa = 10.34RR224 pKa = 11.84SKK226 pKa = 8.34CCRR229 pKa = 11.84MKK231 pKa = 10.47VLRR234 pKa = 11.84RR235 pKa = 11.84RR236 pKa = 11.84AGTDD240 pKa = 3.16LNGWYY245 pKa = 10.25DD246 pKa = 3.44MEE248 pKa = 4.63SFRR251 pKa = 11.84NYY253 pKa = 10.69EE254 pKa = 4.01LFSYY258 pKa = 8.48MWSAFDD264 pKa = 4.69PNNPLGKK271 pKa = 10.19NPILPGDD278 pKa = 3.64TGGASTTTKK287 pKa = 8.32WWNDD291 pKa = 2.27DD292 pKa = 2.69WMRR295 pKa = 11.84ARR297 pKa = 11.84QSPRR301 pKa = 11.84DD302 pKa = 3.56QKK304 pKa = 11.2ISINMKK310 pKa = 10.26LDD312 pKa = 2.96WTQRR316 pKa = 11.84NTYY319 pKa = 10.41DD320 pKa = 3.34NNFVKK325 pKa = 10.71SIDD328 pKa = 3.74PEE330 pKa = 4.01QLTNEE335 pKa = 4.37TTNFWDD341 pKa = 3.13WLLGKK346 pKa = 10.0SPPQGKK352 pKa = 9.54SSPFVPPILSSEE364 pKa = 4.32YY365 pKa = 11.27VNTLWFRR372 pKa = 11.84YY373 pKa = 9.48KK374 pKa = 10.43FYY376 pKa = 10.7FQIGGASISRR386 pKa = 11.84EE387 pKa = 4.1AISWPLRR394 pKa = 11.84EE395 pKa = 4.35TTDD398 pKa = 3.14NTVPCGVAGCPYY410 pKa = 10.04CIKK413 pKa = 10.82KK414 pKa = 10.71GDD416 pKa = 3.9TDD418 pKa = 3.14EE419 pKa = 5.77HH420 pKa = 6.74GILKK424 pKa = 10.18EE425 pKa = 3.91KK426 pKa = 10.42ALEE429 pKa = 4.76RR430 pKa = 11.84ITEE433 pKa = 4.09SPEE436 pKa = 3.61RR437 pKa = 11.84RR438 pKa = 11.84KK439 pKa = 10.36KK440 pKa = 10.68RR441 pKa = 11.84LVEE444 pKa = 3.91KK445 pKa = 10.55LSRR448 pKa = 11.84ALRR451 pKa = 11.84QRR453 pKa = 11.84RR454 pKa = 11.84KK455 pKa = 9.83RR456 pKa = 11.84KK457 pKa = 9.98RR458 pKa = 11.84ITWWDD463 pKa = 3.2EE464 pKa = 3.69GKK466 pKa = 10.53AEE468 pKa = 4.35EE469 pKa = 4.91YY470 pKa = 10.74VGTPHH475 pKa = 6.66THH477 pKa = 6.64PKK479 pKa = 9.71NFKK482 pKa = 8.76NKK484 pKa = 9.92CIRR487 pKa = 11.84RR488 pKa = 11.84LATRR492 pKa = 11.84LGLL495 pKa = 3.83

Molecular weight: 58.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

677

90

495

225.7

26.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.25 ± 0.29

1.625 ± 0.683

5.318 ± 1.03

5.022 ± 0.87

3.693 ± 0.926

8.124 ± 2.352

2.659 ± 0.451

4.727 ± 0.974

7.533 ± 0.793

7.681 ± 0.278

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.363 ± 0.385

4.284 ± 0.772

6.204 ± 1.044

4.431 ± 1.351

9.306 ± 2.941

6.647 ± 2.53

6.056 ± 0.169

3.693 ± 0.49

4.284 ± 0.291

3.102 ± 0.98
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski