Changjiang crawfish virus 2

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KNW1|A0A1L3KNW1_9VIRU Uncharacterized protein OS=Changjiang crawfish virus 2 OX=1922766 PE=4 SV=1
MM1 pKa = 7.66SVGPLLNDD9 pKa = 4.0TFRR12 pKa = 11.84SPIGLRR18 pKa = 11.84ILLILIPEE26 pKa = 4.76GTPNNLRR33 pKa = 11.84TRR35 pKa = 11.84YY36 pKa = 10.76NNMNTSKK43 pKa = 8.05MTNVQRR49 pKa = 11.84IVSRR53 pKa = 11.84YY54 pKa = 8.81YY55 pKa = 9.79EE56 pKa = 4.03GSMLRR61 pKa = 11.84KK62 pKa = 9.43SKK64 pKa = 9.89KK65 pKa = 8.03CQRR68 pKa = 11.84KK69 pKa = 8.57FEE71 pKa = 4.42SFNKK75 pKa = 9.7AEE77 pKa = 3.89KK78 pKa = 10.46RR79 pKa = 11.84EE80 pKa = 4.05WRR82 pKa = 11.84EE83 pKa = 3.27EE84 pKa = 3.84LQRR87 pKa = 11.84RR88 pKa = 11.84IAAVKK93 pKa = 10.36EE94 pKa = 3.62NLHH97 pKa = 5.51YY98 pKa = 11.16NRR100 pKa = 11.84TATRR104 pKa = 11.84AYY106 pKa = 8.46LTKK109 pKa = 10.59PKK111 pKa = 10.63GKK113 pKa = 10.08NKK115 pKa = 9.29WKK117 pKa = 10.4LEE119 pKa = 4.31RR120 pKa = 11.84ISRR123 pKa = 11.84SEE125 pKa = 3.95GMLLDD130 pKa = 3.95MIEE133 pKa = 4.32RR134 pKa = 11.84DD135 pKa = 3.61LYY137 pKa = 11.36AEE139 pKa = 4.39EE140 pKa = 5.72GDD142 pKa = 4.02VEE144 pKa = 4.47LQGGMDD150 pKa = 4.64NIVKK154 pKa = 10.32AAMATAGVAAAVCASTASRR173 pKa = 11.84VIGRR177 pKa = 11.84VGKK180 pKa = 10.3EE181 pKa = 3.76SEE183 pKa = 4.32TLVSQFRR190 pKa = 11.84SQFGEE195 pKa = 4.16FVDD198 pKa = 4.22SLKK201 pKa = 10.96KK202 pKa = 10.59LSGWLFKK209 pKa = 10.67FVLAAVGSWFVFHH222 pKa = 6.37YY223 pKa = 10.39AAAPLICAVVTSMVKK238 pKa = 9.97AHH240 pKa = 6.79APEE243 pKa = 4.49CMGTMGVGKK252 pKa = 10.34QSFGDD257 pKa = 3.73AATLASLLCCLLVPTMSGSAGKK279 pKa = 9.96IAGNFMRR286 pKa = 11.84TVAVFPKK293 pKa = 10.55FSDD296 pKa = 3.3GLAAFIDD303 pKa = 3.89AVLEE307 pKa = 4.1YY308 pKa = 11.03VEE310 pKa = 5.93KK311 pKa = 10.41FVNWVMRR318 pKa = 11.84RR319 pKa = 11.84EE320 pKa = 4.62GEE322 pKa = 4.33DD323 pKa = 2.66KK324 pKa = 10.54WSFGRR329 pKa = 11.84KK330 pKa = 8.88KK331 pKa = 10.56DD332 pKa = 4.8ISTQWRR338 pKa = 11.84NSVLEE343 pKa = 3.77LCKK346 pKa = 10.43RR347 pKa = 11.84VDD349 pKa = 3.52THH351 pKa = 7.0AHH353 pKa = 4.51VPMTLVHH360 pKa = 6.3EE361 pKa = 4.53MRR363 pKa = 11.84DD364 pKa = 3.71KK365 pKa = 11.24VKK367 pKa = 10.63EE368 pKa = 4.41GYY370 pKa = 11.26GLMQFMAHH378 pKa = 6.83RR379 pKa = 11.84EE380 pKa = 4.31SKK382 pKa = 11.09DD383 pKa = 3.41EE384 pKa = 3.72IARR387 pKa = 11.84WIDD390 pKa = 3.28KK391 pKa = 10.82LNTRR395 pKa = 11.84LAPHH399 pKa = 7.01LGALSAEE406 pKa = 4.19NNMRR410 pKa = 11.84PMPYY414 pKa = 10.33LAMLGGASGIGKK426 pKa = 8.14TSVVQVFAAMILALSGEE443 pKa = 4.4VPADD447 pKa = 3.37QVLQNLWQKK456 pKa = 10.93GLSEE460 pKa = 4.19YY461 pKa = 9.9WNGYY465 pKa = 7.43VGQRR469 pKa = 11.84AIIKK473 pKa = 9.6DD474 pKa = 3.25DD475 pKa = 3.63CFQVRR480 pKa = 11.84GVAGAQDD487 pKa = 3.87SEE489 pKa = 4.23AMEE492 pKa = 4.92IIRR495 pKa = 11.84GIGNWACPLNFADD508 pKa = 5.5LSMKK512 pKa = 10.05GRR514 pKa = 11.84VYY516 pKa = 11.04LDD518 pKa = 3.13VALMVGTTNAKK529 pKa = 9.87NIKK532 pKa = 10.0ADD534 pKa = 3.38WEE536 pKa = 4.22PFITCPEE543 pKa = 3.82ALVRR547 pKa = 11.84RR548 pKa = 11.84FQGSYY553 pKa = 8.27WLEE556 pKa = 3.98LNPWYY561 pKa = 9.5ATIEE565 pKa = 4.14GKK567 pKa = 10.65YY568 pKa = 9.66DD569 pKa = 3.06FHH571 pKa = 8.39KK572 pKa = 10.84ISDD575 pKa = 3.73IYY577 pKa = 11.01GSRR580 pKa = 11.84LRR582 pKa = 11.84AFTRR586 pKa = 11.84RR587 pKa = 11.84RR588 pKa = 11.84KK589 pKa = 10.19DD590 pKa = 3.24NPDD593 pKa = 3.07WVPSEE598 pKa = 5.47DD599 pKa = 4.61DD600 pKa = 3.9VLDD603 pKa = 4.32LFPWDD608 pKa = 2.8AWIVKK613 pKa = 9.83RR614 pKa = 11.84HH615 pKa = 5.65GFDD618 pKa = 2.87HH619 pKa = 6.96SNPEE623 pKa = 4.16SGSILPGGMKK633 pKa = 10.09EE634 pKa = 4.0AVKK637 pKa = 10.28IAASTIRR644 pKa = 11.84MRR646 pKa = 11.84KK647 pKa = 8.42IEE649 pKa = 3.95HH650 pKa = 6.64AKK652 pKa = 9.08TVEE655 pKa = 4.19NINAHH660 pKa = 5.15VNFASEE666 pKa = 4.17AFAGLSFAAAEE677 pKa = 4.25AEE679 pKa = 4.25KK680 pKa = 10.54QAGGPYY686 pKa = 9.72VVSEE690 pKa = 4.12GLKK693 pKa = 8.87ATTSKK698 pKa = 9.72TVWEE702 pKa = 4.48EE703 pKa = 3.32NSHH706 pKa = 5.89RR707 pKa = 11.84VGEE710 pKa = 4.25GSVWSQNFVYY720 pKa = 10.61VHH722 pKa = 6.52GKK724 pKa = 10.47LSIDD728 pKa = 3.55EE729 pKa = 4.73DD730 pKa = 4.33GEE732 pKa = 4.65PILLDD737 pKa = 3.34LEE739 pKa = 4.66RR740 pKa = 11.84VQEE743 pKa = 4.29TWTEE747 pKa = 3.72RR748 pKa = 11.84AIRR751 pKa = 11.84TIKK754 pKa = 8.63MWFSKK759 pKa = 9.43VHH761 pKa = 5.68GFVGSLTEE769 pKa = 4.01KK770 pKa = 10.56LGVPHH775 pKa = 6.59TTTTYY780 pKa = 8.86TISRR784 pKa = 11.84GEE786 pKa = 4.09QQCHH790 pKa = 5.77NLDD793 pKa = 3.45AYY795 pKa = 10.07IIDD798 pKa = 3.74SCIWALGLSAVFKK811 pKa = 9.09MVKK814 pKa = 8.13YY815 pKa = 5.63TTRR818 pKa = 11.84ILWAGVEE825 pKa = 4.22MLFKK829 pKa = 10.36MFGVSKK835 pKa = 10.61QSNNPPAKK843 pKa = 10.11EE844 pKa = 3.68KK845 pKa = 11.06GLGKK849 pKa = 10.51FEE851 pKa = 4.15FPRR854 pKa = 11.84VKK856 pKa = 10.52LQLGDD861 pKa = 3.11VDD863 pKa = 4.56LQVGVPPEE871 pKa = 4.28DD872 pKa = 3.52AVHH875 pKa = 5.46EE876 pKa = 4.32VVYY879 pKa = 11.1KK880 pKa = 10.3NMYY883 pKa = 7.87MLGVRR888 pKa = 11.84KK889 pKa = 9.84QGVYY893 pKa = 7.68TQIGNMLCIGQQIFIMPGHH912 pKa = 6.27FDD914 pKa = 3.57EE915 pKa = 5.44YY916 pKa = 11.44VVTNLGNDD924 pKa = 3.46LEE926 pKa = 4.35ARR928 pKa = 11.84VEE930 pKa = 4.24IKK932 pKa = 10.46HH933 pKa = 5.71CTSEE937 pKa = 4.96LIVSLEE943 pKa = 3.73RR944 pKa = 11.84HH945 pKa = 5.73VYY947 pKa = 9.0IACNRR952 pKa = 11.84ARR954 pKa = 11.84FEE956 pKa = 5.24DD957 pKa = 3.99GTDD960 pKa = 3.27LVGIRR965 pKa = 11.84LDD967 pKa = 3.22EE968 pKa = 4.29HH969 pKa = 6.79VNLRR973 pKa = 11.84SHH975 pKa = 6.83RR976 pKa = 11.84NIMNHH981 pKa = 6.26FLTEE985 pKa = 4.56DD986 pKa = 3.42NMSSLLRR993 pKa = 11.84STKK996 pKa = 9.83VATRR1000 pKa = 11.84LDD1002 pKa = 3.46VGRR1005 pKa = 11.84EE1006 pKa = 3.79QGNGRR1011 pKa = 11.84GVTHH1015 pKa = 6.38TTLSSGVLEE1024 pKa = 4.25YY1025 pKa = 10.49TKK1027 pKa = 10.68SVSANDD1033 pKa = 3.65GSTLKK1038 pKa = 11.01SLVRR1042 pKa = 11.84YY1043 pKa = 7.55EE1044 pKa = 4.46MPTKK1048 pKa = 10.65SGDD1051 pKa = 3.52CGGVLTLSEE1060 pKa = 3.72NRR1062 pKa = 11.84FYY1064 pKa = 11.26GGKK1067 pKa = 9.72CVIGLHH1073 pKa = 5.29VAGKK1077 pKa = 10.45ADD1079 pKa = 2.92IFARR1083 pKa = 11.84SGYY1086 pKa = 8.52ATIVTHH1092 pKa = 5.36EE1093 pKa = 4.41AVRR1096 pKa = 11.84EE1097 pKa = 3.9VWMALYY1103 pKa = 10.63GEE1105 pKa = 4.77SSPKK1109 pKa = 9.16VTVHH1113 pKa = 7.41DD1114 pKa = 3.54MVTPVFGEE1122 pKa = 3.93DD1123 pKa = 4.2LVNLEE1128 pKa = 5.31AKK1130 pKa = 10.04LQEE1133 pKa = 3.9QGIIGGSISYY1143 pKa = 9.8IGPAVVPVPIATKK1156 pKa = 10.42SAIKK1160 pKa = 9.77QSPMHH1165 pKa = 6.54EE1166 pKa = 4.42DD1167 pKa = 3.99KK1168 pKa = 11.24PFGDD1172 pKa = 4.63CPVAPAQLRR1181 pKa = 11.84PLHH1184 pKa = 5.78TDD1186 pKa = 2.92EE1187 pKa = 6.08GIVYY1191 pKa = 9.21PMAKK1195 pKa = 9.81AVEE1198 pKa = 4.45AYY1200 pKa = 9.76KK1201 pKa = 10.73SEE1203 pKa = 4.51LLVKK1207 pKa = 10.36DD1208 pKa = 3.9PQSLEE1213 pKa = 3.72IAADD1217 pKa = 3.8LAFKK1221 pKa = 10.52PLFNATAGMCADD1233 pKa = 3.06VLTFEE1238 pKa = 4.75EE1239 pKa = 4.73AVSEE1243 pKa = 4.16IPEE1246 pKa = 4.19GMKK1249 pKa = 10.52LKK1251 pKa = 10.2PLNRR1255 pKa = 11.84KK1256 pKa = 6.93TSAGYY1261 pKa = 9.55KK1262 pKa = 9.28YY1263 pKa = 10.49KK1264 pKa = 11.11GFVTPNEE1271 pKa = 4.03PGKK1274 pKa = 7.22THH1276 pKa = 6.56WLGKK1280 pKa = 9.89EE1281 pKa = 3.87GAVDD1285 pKa = 4.31FTTRR1289 pKa = 11.84PMAQLKK1295 pKa = 9.89CDD1297 pKa = 3.5VMKK1300 pKa = 11.11LIDD1303 pKa = 4.14SATMGIRR1310 pKa = 11.84EE1311 pKa = 4.01VHH1313 pKa = 6.15ICTDD1317 pKa = 3.94FLKK1320 pKa = 11.05DD1321 pKa = 3.44EE1322 pKa = 4.55LRR1324 pKa = 11.84PLEE1327 pKa = 4.06KK1328 pKa = 10.66VKK1330 pKa = 10.7AVKK1333 pKa = 9.52TRR1335 pKa = 11.84MISGTEE1341 pKa = 3.67LDD1343 pKa = 3.44YY1344 pKa = 11.28TIAVRR1349 pKa = 11.84MYY1351 pKa = 10.21FGSFCAAMLANPVISGMAPGINHH1374 pKa = 4.72YY1375 pKa = 6.98TQWGSLAEE1383 pKa = 4.05RR1384 pKa = 11.84LLSKK1388 pKa = 10.42GGKK1391 pKa = 9.5VFDD1394 pKa = 4.4GDD1396 pKa = 3.83FSRR1399 pKa = 11.84FDD1401 pKa = 3.43ASEE1404 pKa = 4.03QPWVHH1409 pKa = 5.69NAILEE1414 pKa = 4.56VIQKK1418 pKa = 8.73WYY1420 pKa = 10.26RR1421 pKa = 11.84RR1422 pKa = 11.84SPNYY1426 pKa = 9.8RR1427 pKa = 11.84AIDD1430 pKa = 3.36EE1431 pKa = 4.28DD1432 pKa = 3.52VRR1434 pKa = 11.84YY1435 pKa = 7.86TLWQDD1440 pKa = 4.42LIHH1443 pKa = 6.88SIHH1446 pKa = 6.1ITGSGCMADD1455 pKa = 5.62QVVQWHH1461 pKa = 6.61KK1462 pKa = 10.75SLPSGHH1468 pKa = 7.44PLTTVVNSMYY1478 pKa = 11.16SLLTLTACYY1487 pKa = 10.02IHH1489 pKa = 6.56LTGDD1493 pKa = 3.51STDD1496 pKa = 3.3MWDD1499 pKa = 3.22HH1500 pKa = 6.62AFINTFGDD1508 pKa = 3.99DD1509 pKa = 3.51NVTGVDD1515 pKa = 4.14DD1516 pKa = 4.42VMCEE1520 pKa = 3.67KK1521 pKa = 10.57FNQVTVADD1529 pKa = 3.76AMMDD1533 pKa = 4.14LFGLTYY1539 pKa = 9.7TAGAKK1544 pKa = 9.79DD1545 pKa = 3.97GKK1547 pKa = 10.01LVPYY1551 pKa = 7.24TTIDD1555 pKa = 3.39KK1556 pKa = 9.26ITFLKK1561 pKa = 10.59RR1562 pKa = 11.84GFIPDD1567 pKa = 4.66DD1568 pKa = 3.36IGEE1571 pKa = 4.0QSVIGGAPCLGWVGPLALEE1590 pKa = 4.31SFLYY1594 pKa = 9.92TPYY1597 pKa = 10.41FYY1599 pKa = 10.72RR1600 pKa = 11.84SNKK1603 pKa = 9.52GPLLDD1608 pKa = 3.69VQSNCEE1614 pKa = 3.77ILQGEE1619 pKa = 4.82LSLHH1623 pKa = 6.52PKK1625 pKa = 10.16DD1626 pKa = 4.48VWDD1629 pKa = 4.37EE1630 pKa = 4.04YY1631 pKa = 11.31NPKK1634 pKa = 10.38LEE1636 pKa = 4.02AWAHH1640 pKa = 5.09KK1641 pKa = 10.29RR1642 pKa = 11.84GVPLKK1647 pKa = 9.83FGSRR1651 pKa = 11.84ASARR1655 pKa = 11.84AYY1657 pKa = 9.44IKK1659 pKa = 9.92TRR1661 pKa = 11.84FDD1663 pKa = 2.95VWFF1666 pKa = 4.41

Molecular weight:
185.84 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KNW1|A0A1L3KNW1_9VIRU Uncharacterized protein OS=Changjiang crawfish virus 2 OX=1922766 PE=4 SV=1
MM1 pKa = 7.1QNEE4 pKa = 4.06EE5 pKa = 4.89SIVDD9 pKa = 3.44TSIFSSDD16 pKa = 2.89ATKK19 pKa = 10.52CAEE22 pKa = 3.88IVGSDD27 pKa = 3.3EE28 pKa = 4.26STISEE33 pKa = 4.09QGDD36 pKa = 3.16ISDD39 pKa = 3.92LKK41 pKa = 10.9KK42 pKa = 10.62YY43 pKa = 9.82LARR46 pKa = 11.84PRR48 pKa = 11.84AINQGSFSTGTGLEE62 pKa = 4.0LDD64 pKa = 3.27RR65 pKa = 11.84GFVNRR70 pKa = 11.84ASWVTILGQSAFDD83 pKa = 3.68RR84 pKa = 11.84MDD86 pKa = 3.4GAVGFRR92 pKa = 11.84ATLCFRR98 pKa = 11.84LVATATPFHH107 pKa = 6.4QGIAALSWQYY117 pKa = 9.95GTTANISQNGLRR129 pKa = 11.84CRR131 pKa = 11.84LPALATNLPHH141 pKa = 7.05VKK143 pKa = 10.18LDD145 pKa = 3.82LAEE148 pKa = 4.03QTAVEE153 pKa = 4.29LRR155 pKa = 11.84VPYY158 pKa = 9.87IAPFEE163 pKa = 4.28YY164 pKa = 10.11IPIDD168 pKa = 3.54VGVGANTAQYY178 pKa = 7.85GTLGLTRR185 pKa = 11.84LTDD188 pKa = 3.69FRR190 pKa = 11.84LGGTQTAARR199 pKa = 11.84YY200 pKa = 6.89TLYY203 pKa = 10.88VWLEE207 pKa = 3.91DD208 pKa = 3.78VQLVGAFPVEE218 pKa = 4.28STVITLQAGLTDD230 pKa = 3.91EE231 pKa = 4.39LRR233 pKa = 11.84KK234 pKa = 10.43SKK236 pKa = 10.68LVTKK240 pKa = 10.65GLDD243 pKa = 3.13AVTKK247 pKa = 10.1VATGLSSIPTLKK259 pKa = 10.78GVMGTTAWYY268 pKa = 9.8ARR270 pKa = 11.84HH271 pKa = 5.94LAGLASSYY279 pKa = 10.93GFSRR283 pKa = 11.84PVDD286 pKa = 3.29EE287 pKa = 4.57TMVKK291 pKa = 9.99RR292 pKa = 11.84KK293 pKa = 9.68HH294 pKa = 5.89VINYY298 pKa = 9.53AGEE301 pKa = 4.14SHH303 pKa = 7.58IDD305 pKa = 3.29MPLAAFKK312 pKa = 10.72ASPFQTNLVSPSKK325 pKa = 11.08VGGTDD330 pKa = 3.31EE331 pKa = 5.03DD332 pKa = 4.12QMALSYY338 pKa = 10.94VLSKK342 pKa = 10.63PSMVFRR348 pKa = 11.84RR349 pKa = 11.84VWDD352 pKa = 3.4STFAIGDD359 pKa = 3.78YY360 pKa = 10.14IYY362 pKa = 10.54AGHH365 pKa = 6.74VSPMSLWFRR374 pKa = 11.84NNPTGLSGNRR384 pKa = 11.84AIPSNATLTTSCFIPSALMYY404 pKa = 10.18VGAGFRR410 pKa = 11.84YY411 pKa = 8.13WRR413 pKa = 11.84GNLRR417 pKa = 11.84YY418 pKa = 7.79TFQFSKK424 pKa = 10.04TKK426 pKa = 8.07MHH428 pKa = 7.08GGRR431 pKa = 11.84VVITFTPSRR440 pKa = 11.84TTALSAPIGNTVTVPTSGSTTGVSMQGYY468 pKa = 7.63TKK470 pKa = 10.28MFDD473 pKa = 3.5LRR475 pKa = 11.84DD476 pKa = 3.56SSVVDD481 pKa = 4.23FVVPYY486 pKa = 10.51VSSEE490 pKa = 3.81PYY492 pKa = 10.8ANVGFSTGTLTVAVASPLNSPTAAADD518 pKa = 3.94SIDD521 pKa = 3.4MLVYY525 pKa = 10.26VAAEE529 pKa = 3.81PDD531 pKa = 3.56FEE533 pKa = 4.39FAAMAPTIVDD543 pKa = 3.91GTDD546 pKa = 2.73HH547 pKa = 7.55RR548 pKa = 11.84SNQTATAGIFLQAGGVSPDD567 pKa = 3.43KK568 pKa = 10.68GTSQLVIGEE577 pKa = 4.1IFKK580 pKa = 10.65SVKK583 pKa = 9.56QIAMVPSWHH592 pKa = 6.31TWDD595 pKa = 3.75VVNDD599 pKa = 3.57NAITYY604 pKa = 8.56SLKK607 pKa = 9.77PWYY610 pKa = 9.59RR611 pKa = 11.84KK612 pKa = 9.03NWLPVLSGNSAISNTATAVWYY633 pKa = 8.78GSPLGRR639 pKa = 11.84MIEE642 pKa = 4.2MYY644 pKa = 10.38AYY646 pKa = 10.21GYY648 pKa = 11.04GSTLYY653 pKa = 10.08TVISDD658 pKa = 4.17KK659 pKa = 11.05PDD661 pKa = 3.46ASSSTMEE668 pKa = 4.22VFVVPSDD675 pKa = 3.62AGTTPASLGDD685 pKa = 3.26IYY687 pKa = 11.21NRR689 pKa = 11.84QSAASTGHH697 pKa = 6.85TIAEE701 pKa = 4.14TRR703 pKa = 11.84GTIRR707 pKa = 11.84VTIPNWSRR715 pKa = 11.84VRR717 pKa = 11.84RR718 pKa = 11.84IPILAANNGTSEE730 pKa = 3.95ASNPGFITGTAGTYY744 pKa = 8.06NQEE747 pKa = 3.6HH748 pKa = 7.31EE749 pKa = 4.56YY750 pKa = 11.09ALSVRR755 pKa = 11.84NNTGSTIRR763 pKa = 11.84YY764 pKa = 9.03NMGRR768 pKa = 11.84SAGDD772 pKa = 3.54DD773 pKa = 3.6FVLSQYY779 pKa = 10.45IGPPLCNFFQSTATSRR795 pKa = 11.84PNPSTLPFF803 pKa = 4.46

Molecular weight:
86.55 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

2469

803

1666

1234.5

136.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.465 ± 0.55

1.296 ± 0.371

5.022 ± 0.228

5.225 ± 1.163

4.131 ± 0.057

8.1 ± 0.134

2.187 ± 0.45

5.144 ± 0.021

5.225 ± 1.3

8.06 ± 0.461

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.078 ± 0.392

3.888 ± 0.19

4.455 ± 0.495

2.835 ± 0.085

5.144 ± 0.089

7.412 ± 1.267

7.047 ± 1.674

7.938 ± 0.12

1.944 ± 0.179

3.402 ± 0.321

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski