Cellulomonas shaoxiangyii

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Cellulomonadaceae; Cellulomonas

Average proteome isoelectric point is 6.23

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3337 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1CME5|A0A4V1CME5_9CELL GNAT family N-acetyltransferase OS=Cellulomonas shaoxiangyii OX=2566013 GN=E5225_02975 PE=4 SV=1
MM1 pKa = 7.46KK2 pKa = 10.29RR3 pKa = 11.84IQRR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84GLTLAASVAGLGLVLTACSGGDD30 pKa = 3.44SGDD33 pKa = 3.82GGDD36 pKa = 4.22GGTTGGAGEE45 pKa = 4.24AAVDD49 pKa = 3.49CSEE52 pKa = 3.95FEE54 pKa = 4.15EE55 pKa = 4.76YY56 pKa = 11.18GDD58 pKa = 4.79LEE60 pKa = 4.56GTTVTVYY67 pKa = 10.41TSIVDD72 pKa = 3.77PEE74 pKa = 4.38AEE76 pKa = 4.14QQRR79 pKa = 11.84DD80 pKa = 3.32SYY82 pKa = 12.02APFEE86 pKa = 4.36QCTGATIEE94 pKa = 4.29YY95 pKa = 8.59EE96 pKa = 4.15GSRR99 pKa = 11.84EE100 pKa = 3.93FEE102 pKa = 3.84AQLPVRR108 pKa = 11.84LEE110 pKa = 4.11AGNPPDD116 pKa = 3.65IAYY119 pKa = 9.42IPQPGFLASLVAEE132 pKa = 4.45YY133 pKa = 10.42PDD135 pKa = 3.66VVQAAPEE142 pKa = 4.02AVVDD146 pKa = 4.03NANEE150 pKa = 4.26YY151 pKa = 10.9YY152 pKa = 10.32SEE154 pKa = 3.96EE155 pKa = 3.94WVNYY159 pKa = 7.04GTVDD163 pKa = 3.13GTLYY167 pKa = 9.35ATPLGANVKK176 pKa = 10.15SFVWYY181 pKa = 10.36SPALFEE187 pKa = 4.65EE188 pKa = 4.38NGYY191 pKa = 9.86EE192 pKa = 5.91IPATWQDD199 pKa = 4.2LLDD202 pKa = 4.06LTDD205 pKa = 5.55QIVEE209 pKa = 4.61DD210 pKa = 4.48NPDD213 pKa = 3.55AKK215 pKa = 9.93PWCAGIEE222 pKa = 4.21SGDD225 pKa = 3.58ATGWPATDD233 pKa = 3.11WLEE236 pKa = 4.41DD237 pKa = 3.59VVLRR241 pKa = 11.84TAGPDD246 pKa = 4.24VYY248 pKa = 10.79DD249 pKa = 2.82QWVNHH254 pKa = 7.0EE255 pKa = 4.78IPFDD259 pKa = 4.16DD260 pKa = 4.3PQIVAALEE268 pKa = 3.92EE269 pKa = 4.33AGGILKK275 pKa = 10.62NEE277 pKa = 4.49DD278 pKa = 3.73YY279 pKa = 11.83VNGGLGNVEE288 pKa = 5.09SIATAPWTEE297 pKa = 3.78AGLPVIDD304 pKa = 5.06GSCFLHH310 pKa = 6.93RR311 pKa = 11.84AANFYY316 pKa = 10.49AANLEE321 pKa = 4.3GYY323 pKa = 9.09EE324 pKa = 4.05VAEE327 pKa = 4.95DD328 pKa = 4.1GEE330 pKa = 4.45IFAFYY335 pKa = 10.71LPGPTEE341 pKa = 4.08DD342 pKa = 4.21EE343 pKa = 4.35KK344 pKa = 11.35PLLGGGEE351 pKa = 4.35FVTAFSDD358 pKa = 3.76RR359 pKa = 11.84PEE361 pKa = 3.99VQAFHH366 pKa = 7.45AYY368 pKa = 10.19LSSPQWANAKK378 pKa = 10.37AEE380 pKa = 4.23STPGGGWLSANSGLDD395 pKa = 3.26RR396 pKa = 11.84DD397 pKa = 4.84LLTSPIDD404 pKa = 3.45QLSFDD409 pKa = 5.11LLTDD413 pKa = 3.55DD414 pKa = 5.54AYY416 pKa = 9.96TFRR419 pKa = 11.84FDD421 pKa = 5.99GSDD424 pKa = 3.49QMPGAVGAGAFWRR437 pKa = 11.84EE438 pKa = 3.62MTAWISPGQDD448 pKa = 2.75AQTTLTNIEE457 pKa = 4.31AAWPTSS463 pKa = 3.27

Molecular weight: 49.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P7SLV9|A0A4P7SLV9_9CELL ArsR family transcriptional regulator OS=Cellulomonas shaoxiangyii OX=2566013 GN=E5225_10215 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.87KK16 pKa = 9.7HH17 pKa = 5.84RR18 pKa = 11.84KK19 pKa = 8.56LLRR22 pKa = 11.84KK23 pKa = 7.78TRR25 pKa = 11.84HH26 pKa = 3.65QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3337

0

3337

1147658

29

2544

343.9

36.31

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

15.224 ± 0.068

0.553 ± 0.01

6.6 ± 0.033

4.992 ± 0.042

2.341 ± 0.026

9.67 ± 0.039

2.163 ± 0.019

2.303 ± 0.033

1.15 ± 0.024

10.244 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.445 ± 0.016

1.375 ± 0.021

6.318 ± 0.036

2.534 ± 0.022

8.279 ± 0.043

4.407 ± 0.026

6.391 ± 0.042

10.632 ± 0.045

1.611 ± 0.019

1.769 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski