Mytilus coruscus (Sea mussel)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Mytiloida; Mytiloidea; Mytilidae; Mytilinae; Mytilus

Average proteome isoelectric point is 6.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 64248 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6J8B670|A0A6J8B670_MYTCO PLIN2 OS=Mytilus coruscus OX=42192 GN=MCOR_15481 PE=3 SV=1
MM1 pKa = 7.26VCDD4 pKa = 4.11LQVTTTLIRR13 pKa = 11.84DD14 pKa = 3.85FCDD17 pKa = 2.97TDD19 pKa = 3.23IDD21 pKa = 4.5GDD23 pKa = 4.2GVLNDD28 pKa = 3.92EE29 pKa = 5.0DD30 pKa = 3.91NCVFISNPSQTDD42 pKa = 2.51SDD44 pKa = 4.18GNHH47 pKa = 6.72RR48 pKa = 11.84GDD50 pKa = 3.54VCEE53 pKa = 4.77SDD55 pKa = 3.48YY56 pKa = 11.7DD57 pKa = 3.66QDD59 pKa = 3.92GTIDD63 pKa = 3.76TLDD66 pKa = 3.55NCPNNKK72 pKa = 9.84FINEE76 pKa = 4.23SDD78 pKa = 3.15FGTYY82 pKa = 9.14TGLDD86 pKa = 3.93LNPEE90 pKa = 4.26LTLQPAPSWMILHH103 pKa = 6.89GGKK106 pKa = 10.21EE107 pKa = 3.8IRR109 pKa = 11.84QVSVTTKK116 pKa = 10.02PVASVGNHH124 pKa = 6.16RR125 pKa = 11.84GDD127 pKa = 3.49VCEE130 pKa = 4.77SDD132 pKa = 3.48YY133 pKa = 11.7DD134 pKa = 3.66QDD136 pKa = 3.92GTIDD140 pKa = 3.76TLDD143 pKa = 3.55NCPNNKK149 pKa = 9.84FINEE153 pKa = 3.93SDD155 pKa = 3.25FGYY158 pKa = 10.53LYY160 pKa = 10.35WFRR163 pKa = 11.84PKK165 pKa = 10.6SS166 pKa = 3.43

Molecular weight: 18.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6J8EZ31|A0A6J8EZ31_MYTCO G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Mytilus coruscus OX=42192 GN=MCOR_57689 PE=3 SV=1
MM1 pKa = 6.96YY2 pKa = 10.27LAYY5 pKa = 10.19NSNGIRR11 pKa = 11.84TPVGGRR17 pKa = 11.84VINKK21 pKa = 5.57QTKK24 pKa = 9.2HH25 pKa = 5.37SKK27 pKa = 10.23QSITHH32 pKa = 6.88LSSQQSITHH41 pKa = 6.89LSRR44 pKa = 11.84VINNQTKK51 pKa = 9.85HH52 pKa = 5.22RR53 pKa = 11.84QQSITHH59 pKa = 6.93LSRR62 pKa = 11.84VINKK66 pKa = 6.69QTKK69 pKa = 9.13HH70 pKa = 5.14RR71 pKa = 11.84QQSITHH77 pKa = 6.93LSRR80 pKa = 11.84VINKK84 pKa = 6.69QTKK87 pKa = 9.13HH88 pKa = 5.14RR89 pKa = 11.84QQSITHH95 pKa = 6.93LSRR98 pKa = 11.84VINKK102 pKa = 6.69QTKK105 pKa = 9.13HH106 pKa = 5.14RR107 pKa = 11.84QQSITHH113 pKa = 6.93LSRR116 pKa = 11.84VINKK120 pKa = 6.88QTKK123 pKa = 8.56HH124 pKa = 5.29HH125 pKa = 5.48QQSITHH131 pKa = 7.05LSRR134 pKa = 11.84VINKK138 pKa = 6.69QTKK141 pKa = 9.13HH142 pKa = 5.14RR143 pKa = 11.84QQSITHH149 pKa = 6.92LSRR152 pKa = 11.84VINNQTKK159 pKa = 10.15HH160 pKa = 4.98SQQSITHH167 pKa = 6.88LSRR170 pKa = 11.84VINKK174 pKa = 6.86QTKK177 pKa = 9.52HH178 pKa = 4.93SQQSITHH185 pKa = 6.88LSRR188 pKa = 11.84VINKK192 pKa = 6.69QTKK195 pKa = 9.13HH196 pKa = 5.14RR197 pKa = 11.84QQSITHH203 pKa = 6.93LSRR206 pKa = 11.84VINKK210 pKa = 6.67QTKK213 pKa = 9.2HH214 pKa = 5.37SKK216 pKa = 10.23QSITHH221 pKa = 6.91LSRR224 pKa = 11.84IINKK228 pKa = 6.6QTKK231 pKa = 9.12HH232 pKa = 5.15RR233 pKa = 11.84QQSITHH239 pKa = 6.93LSRR242 pKa = 11.84VINKK246 pKa = 6.67QTKK249 pKa = 9.2HH250 pKa = 5.37SKK252 pKa = 10.23QSITHH257 pKa = 6.79LSRR260 pKa = 11.84VINKK264 pKa = 6.69QTKK267 pKa = 9.13HH268 pKa = 5.14RR269 pKa = 11.84QQSITHH275 pKa = 6.93LSRR278 pKa = 11.84VINKK282 pKa = 6.69QTKK285 pKa = 9.13HH286 pKa = 5.14RR287 pKa = 11.84QQSITHH293 pKa = 6.93LSRR296 pKa = 11.84VINKK300 pKa = 6.77QTKK303 pKa = 8.19HH304 pKa = 6.31HH305 pKa = 6.24II306 pKa = 3.92

Molecular weight: 36.02 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

58248

6000

64248

29520201

66

9566

459.5

52.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.69 ± 0.008

2.365 ± 0.009

5.994 ± 0.007

6.508 ± 0.012

3.921 ± 0.006

5.099 ± 0.012

2.524 ± 0.005

6.532 ± 0.009

7.543 ± 0.013

8.393 ± 0.011

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.341 ± 0.005

5.861 ± 0.009

4.184 ± 0.009

4.333 ± 0.008

4.757 ± 0.008

8.157 ± 0.012

6.38 ± 0.014

5.976 ± 0.008

1.044 ± 0.003

3.398 ± 0.006
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski