Termite associated circular virus 1

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2P1E327|A0A2P1E327_9VIRU Putative capsid protein OS=Termite associated circular virus 1 OX=2108549 PE=4 SV=1
MM1 pKa = 7.4SFRR4 pKa = 11.84WQGRR8 pKa = 11.84YY9 pKa = 9.71LFLTYY14 pKa = 10.59AQAGNDD20 pKa = 3.57FTPNEE25 pKa = 4.85LITFIRR31 pKa = 11.84EE32 pKa = 4.06SGRR35 pKa = 11.84KK36 pKa = 6.95QPGYY40 pKa = 10.32ILIGKK45 pKa = 7.84EE46 pKa = 3.66RR47 pKa = 11.84HH48 pKa = 5.11QDD50 pKa = 3.17GGLHH54 pKa = 4.6YY55 pKa = 10.43HH56 pKa = 7.07CFVDD60 pKa = 3.52WVKK63 pKa = 10.85RR64 pKa = 11.84FSFTNAARR72 pKa = 11.84FDD74 pKa = 4.26FGGHH78 pKa = 6.44HH79 pKa = 6.9PNISPVNSPKK89 pKa = 10.81ACLDD93 pKa = 3.6YY94 pKa = 10.92CSKK97 pKa = 11.29DD98 pKa = 2.92GDD100 pKa = 4.05TTSWGTPPDD109 pKa = 3.73LDD111 pKa = 4.07SNHH114 pKa = 6.47RR115 pKa = 11.84EE116 pKa = 4.0SRR118 pKa = 11.84NEE120 pKa = 3.38LWSRR124 pKa = 11.84LLDD127 pKa = 3.67TATNPPEE134 pKa = 3.81FLQLVRR140 pKa = 11.84EE141 pKa = 4.11HH142 pKa = 6.84APYY145 pKa = 11.07DD146 pKa = 3.2FATRR150 pKa = 11.84YY151 pKa = 6.46TQLDD155 pKa = 3.43TMARR159 pKa = 11.84AVYY162 pKa = 10.03RR163 pKa = 11.84PRR165 pKa = 11.84TNFTSEE171 pKa = 4.23FEE173 pKa = 4.75HH174 pKa = 7.41EE175 pKa = 5.29DD176 pKa = 3.19FTLPEE181 pKa = 5.12GIEE184 pKa = 4.17GWISSLFTKK193 pKa = 9.87TRR195 pKa = 11.84TAPYY199 pKa = 9.66DD200 pKa = 3.73PSHH203 pKa = 6.9SSSSATLVPEE213 pKa = 4.18RR214 pKa = 11.84PVGRR218 pKa = 11.84GRR220 pKa = 11.84LGTTYY225 pKa = 10.46TSRR228 pKa = 11.84DD229 pKa = 3.31LSTSTNSMPRR239 pKa = 11.84QTTSFSTTAKK249 pKa = 9.62SSSYY253 pKa = 8.22QTTSPGWGAGASSKK267 pKa = 10.2QQTSTEE273 pKa = 4.31EE274 pKa = 4.02KK275 pKa = 9.54EE276 pKa = 4.27HH277 pKa = 6.34

Molecular weight: 31.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2P1E327|A0A2P1E327_9VIRU Putative capsid protein OS=Termite associated circular virus 1 OX=2108549 PE=4 SV=1
MM1 pKa = 7.86PYY3 pKa = 10.3SKK5 pKa = 10.16RR6 pKa = 11.84RR7 pKa = 11.84YY8 pKa = 6.51TRR10 pKa = 11.84KK11 pKa = 9.11PYY13 pKa = 10.11RR14 pKa = 11.84RR15 pKa = 11.84STRR18 pKa = 11.84KK19 pKa = 5.8TTTRR23 pKa = 11.84RR24 pKa = 11.84TNRR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84SGLTKK34 pKa = 9.26TVARR38 pKa = 11.84ISRR41 pKa = 11.84SVQLRR46 pKa = 11.84QVEE49 pKa = 4.62TKK51 pKa = 10.73RR52 pKa = 11.84NITINLVAAPTPSTNANWQYY72 pKa = 10.2YY73 pKa = 7.34YY74 pKa = 11.23RR75 pKa = 11.84NVFVDD80 pKa = 4.02LANGVDD86 pKa = 3.66SDD88 pKa = 5.33DD89 pKa = 4.27IIGNEE94 pKa = 4.04FVDD97 pKa = 4.6PYY99 pKa = 11.09VTFKK103 pKa = 10.87WNVQFDD109 pKa = 4.14INNLRR114 pKa = 11.84SLNTSNTGVQTVKK127 pKa = 8.15WWMMLVACNDD137 pKa = 3.67YY138 pKa = 11.26LPATVSGFNSIVPGTSTDD156 pKa = 3.41PGGWWVQPDD165 pKa = 3.9PTKK168 pKa = 9.19MTFNGNNVKK177 pKa = 9.84ILKK180 pKa = 10.4KK181 pKa = 7.79MTRR184 pKa = 11.84QWHH187 pKa = 5.27LTSIPSVVGTATVSGTEE204 pKa = 3.93QFSGKK209 pKa = 8.66MKK211 pKa = 9.93YY212 pKa = 8.43RR213 pKa = 11.84WRR215 pKa = 11.84RR216 pKa = 11.84GKK218 pKa = 8.81KK219 pKa = 7.56TFEE222 pKa = 4.1DD223 pKa = 4.0RR224 pKa = 11.84NTIEE228 pKa = 3.73EE229 pKa = 4.23DD230 pKa = 2.99KK231 pKa = 11.16TRR233 pKa = 11.84VSQLRR238 pKa = 11.84GMNYY242 pKa = 10.38YY243 pKa = 9.76IVTGWWVPTALSGTPLAAPIFYY265 pKa = 10.76SVDD268 pKa = 2.82QYY270 pKa = 11.89LYY272 pKa = 10.86FKK274 pKa = 10.98DD275 pKa = 3.63PP276 pKa = 3.56

Molecular weight: 31.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

553

276

277

276.5

31.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.702 ± 0.532

0.723 ± 0.268

5.063 ± 0.262

3.978 ± 1.34

4.702 ± 0.801

6.329 ± 0.395

1.989 ± 1.208

3.436 ± 0.677

4.702 ± 1.083

5.787 ± 0.53

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.808 ± 0.541

5.425 ± 1.353

5.967 ± 0.396

3.617 ± 0.005

8.137 ± 0.415

9.042 ± 1.602

11.573 ± 0.016

5.606 ± 2.295

2.893 ± 0.542

4.521 ± 0.41
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski