Bos taurus papillomavirus 18

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyokappapapillomavirus; Dyokappapapillomavirus 4

Average proteome isoelectric point is 6.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B2K2B2|A0A1B2K2B2_9PAPI Minor capsid protein L2 OS=Bos taurus papillomavirus 18 OX=1887216 GN=L2 PE=3 SV=1
MM1 pKa = 7.33ATNKK5 pKa = 9.88RR6 pKa = 11.84SRR8 pKa = 11.84VKK10 pKa = 10.24RR11 pKa = 11.84ASVSDD16 pKa = 3.82LAKK19 pKa = 9.71TCATGDD25 pKa = 3.91CPEE28 pKa = 4.23DD29 pKa = 3.57VYY31 pKa = 12.03NKK33 pKa = 8.78VTGNTLADD41 pKa = 4.14KK42 pKa = 10.41ILRR45 pKa = 11.84FLSPFLYY52 pKa = 10.55FGGLSIGTGAGGGGRR67 pKa = 11.84FGYY70 pKa = 10.22RR71 pKa = 11.84PIGGTSGGGRR81 pKa = 11.84PTVTVRR87 pKa = 11.84PVVPVEE93 pKa = 4.29TIAPEE98 pKa = 3.93IEE100 pKa = 4.15VGGTIDD106 pKa = 3.28SSGVIDD112 pKa = 3.66AAGPSVIEE120 pKa = 3.85LTPINGDD127 pKa = 3.28PTVIDD132 pKa = 3.91VAPDD136 pKa = 3.27TAINEE141 pKa = 4.27TGPPILEE148 pKa = 4.04VTPEE152 pKa = 3.74VRR154 pKa = 11.84VTVSGRR160 pKa = 11.84EE161 pKa = 4.07TEE163 pKa = 4.41TVVQNPTFTPDD174 pKa = 3.07PSTINTSHH182 pKa = 6.7NEE184 pKa = 4.09NIVFEE189 pKa = 4.82PNTNAVYY196 pKa = 10.53VGSTAEE202 pKa = 3.83TSEE205 pKa = 4.36EE206 pKa = 3.86IEE208 pKa = 3.97LSVFSRR214 pKa = 11.84GDD216 pKa = 3.31TFSDD220 pKa = 3.49SFATEE225 pKa = 3.96VEE227 pKa = 4.38EE228 pKa = 4.34TSFDD232 pKa = 3.29ASTPLVRR239 pKa = 11.84QAEE242 pKa = 4.21GRR244 pKa = 11.84PINRR248 pKa = 11.84FGRR251 pKa = 11.84YY252 pKa = 6.77FQQVPVSEE260 pKa = 4.82PEE262 pKa = 4.06FLSRR266 pKa = 11.84PASMVTFGNAAYY278 pKa = 10.33DD279 pKa = 3.88PDD281 pKa = 3.46ATAIFEE287 pKa = 4.8DD288 pKa = 4.48DD289 pKa = 4.45LRR291 pKa = 11.84DD292 pKa = 4.03LEE294 pKa = 5.57DD295 pKa = 3.55IAAAPYY301 pKa = 10.54TDD303 pKa = 5.01FSDD306 pKa = 4.37LKK308 pKa = 9.09TLSRR312 pKa = 11.84PYY314 pKa = 9.78YY315 pKa = 9.92SRR317 pKa = 11.84GGRR320 pKa = 11.84TGRR323 pKa = 11.84LIVSRR328 pKa = 11.84VGTKK332 pKa = 8.23STIHH336 pKa = 5.6TRR338 pKa = 11.84SGLSIGASVHH348 pKa = 6.23YY349 pKa = 8.72YY350 pKa = 10.24TEE352 pKa = 4.49LSTINEE358 pKa = 4.21PTVAEE363 pKa = 4.04QPPFEE368 pKa = 5.46ISDD371 pKa = 3.95FVGSTSADD379 pKa = 3.16EE380 pKa = 5.07AFINSQGTEE389 pKa = 3.95EE390 pKa = 4.76FEE392 pKa = 5.07LISLRR397 pKa = 11.84DD398 pKa = 3.71PSVEE402 pKa = 4.09TLDD405 pKa = 3.55EE406 pKa = 4.06TSEE409 pKa = 4.11YY410 pKa = 11.03SEE412 pKa = 4.32TALLDD417 pKa = 4.25HH418 pKa = 7.22IEE420 pKa = 4.52EE421 pKa = 4.19IGEE424 pKa = 3.99NLRR427 pKa = 11.84LIIQSDD433 pKa = 3.54EE434 pKa = 4.23RR435 pKa = 11.84EE436 pKa = 3.84QTIISVPSFNEE447 pKa = 3.98SVAEE451 pKa = 3.93NAVSIVVDD459 pKa = 3.81YY460 pKa = 10.77PNSTSEE466 pKa = 4.38SPATNYY472 pKa = 9.75PMEE475 pKa = 4.63YY476 pKa = 8.14PTDD479 pKa = 4.16TISPSQPATPGLTPLIPSSLQPTNYY504 pKa = 9.5FDD506 pKa = 3.22YY507 pKa = 9.85WQLFEE512 pKa = 4.52PSLWRR517 pKa = 11.84SRR519 pKa = 11.84KK520 pKa = 8.93RR521 pKa = 11.84KK522 pKa = 9.47RR523 pKa = 11.84NVYY526 pKa = 9.2YY527 pKa = 10.94

Molecular weight: 57.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B2K215|A0A1B2K215_9PAPI Protein E6 OS=Bos taurus papillomavirus 18 OX=1887216 GN=E6 PE=3 SV=1
MM1 pKa = 7.07EE2 pKa = 4.86TLLSRR7 pKa = 11.84LDD9 pKa = 3.54AVRR12 pKa = 11.84EE13 pKa = 3.97EE14 pKa = 4.81LLTLYY19 pKa = 10.65EE20 pKa = 4.41SGSNRR25 pKa = 11.84LEE27 pKa = 3.82DD28 pKa = 5.03QIRR31 pKa = 11.84HH32 pKa = 4.56WKK34 pKa = 9.73LLRR37 pKa = 11.84KK38 pKa = 9.34EE39 pKa = 3.87YY40 pKa = 11.36VMLHH44 pKa = 6.37FARR47 pKa = 11.84KK48 pKa = 8.93HH49 pKa = 5.38DD50 pKa = 3.68IYY52 pKa = 11.11RR53 pKa = 11.84LGLSSVPTLQVSQAKK68 pKa = 9.69AKK70 pKa = 9.82EE71 pKa = 4.19AIRR74 pKa = 11.84MEE76 pKa = 4.35LLLEE80 pKa = 4.17SLAKK84 pKa = 9.99SEE86 pKa = 4.36YY87 pKa = 10.58SSEE90 pKa = 3.82PWTLSEE96 pKa = 4.3TSIEE100 pKa = 4.1MLEE103 pKa = 4.44TPPKK107 pKa = 10.8DD108 pKa = 3.29CFKK111 pKa = 10.77KK112 pKa = 10.07HH113 pKa = 4.81GVTVEE118 pKa = 3.83VLFDD122 pKa = 4.11GDD124 pKa = 4.06PEE126 pKa = 4.36NVMTYY131 pKa = 8.78TNWKK135 pKa = 9.42DD136 pKa = 2.76IYY138 pKa = 10.28YY139 pKa = 8.17QTEE142 pKa = 4.27SGWEE146 pKa = 3.91KK147 pKa = 8.31TTGHH151 pKa = 5.74VNYY154 pKa = 9.89DD155 pKa = 3.06GCFYY159 pKa = 11.23YY160 pKa = 10.36EE161 pKa = 4.55GRR163 pKa = 11.84SQVYY167 pKa = 7.43FVRR170 pKa = 11.84FAPDD174 pKa = 3.0AARR177 pKa = 11.84YY178 pKa = 9.14GSTGEE183 pKa = 3.89WEE185 pKa = 3.88VRR187 pKa = 11.84YY188 pKa = 10.33QNDD191 pKa = 2.82VFFPVASVSSTSEE204 pKa = 3.43WCPPSTGSGIQPWGDD219 pKa = 3.52KK220 pKa = 11.09LPVDD224 pKa = 4.09TCLGSAGRR232 pKa = 11.84PAQTARR238 pKa = 11.84RR239 pKa = 11.84SPDD242 pKa = 2.99SSGSSATSTTTSRR255 pKa = 11.84RR256 pKa = 11.84RR257 pKa = 11.84RR258 pKa = 11.84KK259 pKa = 9.29SVRR262 pKa = 11.84IRR264 pKa = 11.84KK265 pKa = 7.86ATAPQEE271 pKa = 4.31AQRR274 pKa = 11.84SSPRR278 pKa = 11.84SSSGAEE284 pKa = 4.12DD285 pKa = 3.3GRR287 pKa = 11.84QARR290 pKa = 11.84FQPGGRR296 pKa = 11.84IPPGSHH302 pKa = 4.05QQVEE306 pKa = 4.32RR307 pKa = 11.84GARR310 pKa = 11.84EE311 pKa = 3.59NPRR314 pKa = 11.84RR315 pKa = 11.84RR316 pKa = 11.84RR317 pKa = 11.84SRR319 pKa = 11.84LIQLLADD326 pKa = 3.96AADD329 pKa = 3.87PPIAVLRR336 pKa = 11.84GASNSLKK343 pKa = 10.15CLRR346 pKa = 11.84YY347 pKa = 9.45RR348 pKa = 11.84LNRR351 pKa = 11.84RR352 pKa = 11.84HH353 pKa = 6.5RR354 pKa = 11.84GLFNHH359 pKa = 7.45ISTTWSWADD368 pKa = 3.24EE369 pKa = 4.36RR370 pKa = 11.84GPGANARR377 pKa = 11.84MIIAFTNSTQRR388 pKa = 11.84QTFLDD393 pKa = 4.3TVSLPRR399 pKa = 11.84PITYY403 pKa = 10.31FLGNFSSLL411 pKa = 3.44

Molecular weight: 46.54 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2293

88

608

382.2

43.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.582 ± 0.664

2.093 ± 0.816

5.713 ± 0.368

7.021 ± 0.678

4.405 ± 0.274

5.931 ± 0.73

2.268 ± 0.496

5.233 ± 0.592

4.666 ± 0.936

8.112 ± 0.762

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.919 ± 0.458

5.015 ± 1.012

5.451 ± 0.782

4.187 ± 0.638

6.106 ± 0.996

8.33 ± 0.848

6.847 ± 1.056

5.975 ± 0.595

1.526 ± 0.347

3.62 ± 0.249
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski