Elephant endotheliotropic herpesvirus 5

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Proboscivirus; unclassified Proboscivirus

Average proteome isoelectric point is 6.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 115 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A075CZJ7|A0A075CZJ7_9BETA Membrane protein EE28 OS=Elephant endotheliotropic herpesvirus 5 OX=768738 GN=EE28 PE=4 SV=1
MM1 pKa = 7.7NIRR4 pKa = 11.84YY5 pKa = 9.22SADD8 pKa = 3.19CTKK11 pKa = 10.44ILEE14 pKa = 4.63DD15 pKa = 3.94LDD17 pKa = 4.82NYY19 pKa = 11.32LEE21 pKa = 4.54TPLLYY26 pKa = 10.81NNRR29 pKa = 11.84DD30 pKa = 3.82DD31 pKa = 5.16GNSSVDD37 pKa = 3.49TPPPLEE43 pKa = 4.02TSEE46 pKa = 5.78DD47 pKa = 3.57GDD49 pKa = 4.03EE50 pKa = 4.32NFVVLTDD57 pKa = 5.61LITTSASTSCPEE69 pKa = 4.99PEE71 pKa = 4.4DD72 pKa = 3.57QDD74 pKa = 3.66TEE76 pKa = 4.64RR77 pKa = 11.84IYY79 pKa = 11.07LPRR82 pKa = 11.84DD83 pKa = 3.47FSSLSEE89 pKa = 5.47DD90 pKa = 3.33IPCYY94 pKa = 7.27EE95 pKa = 4.33TNVEE99 pKa = 4.02LSQRR103 pKa = 11.84KK104 pKa = 6.78WVGTNDD110 pKa = 3.5TTPSDD115 pKa = 4.28EE116 pKa = 4.55NPVSAGQGSQRR127 pKa = 11.84KK128 pKa = 8.92YY129 pKa = 10.27IYY131 pKa = 10.36PGDD134 pKa = 3.98LEE136 pKa = 4.46NVSTLFNSVFFFNRR150 pKa = 3.09

Molecular weight: 16.93 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A075CYD2|A0A075CYD2_9BETA Membrane protein EE42 OS=Elephant endotheliotropic herpesvirus 5 OX=768738 GN=EE42 PE=4 SV=1
MM1 pKa = 7.48SFYY4 pKa = 10.84FFLIWPRR11 pKa = 11.84STIKK15 pKa = 10.51LSYY18 pKa = 9.87IRR20 pKa = 11.84ARR22 pKa = 11.84HH23 pKa = 5.62LRR25 pKa = 11.84NKK27 pKa = 9.59LRR29 pKa = 11.84KK30 pKa = 8.34QLFYY34 pKa = 11.05SLCLSILNGLCYY46 pKa = 10.3ALHH49 pKa = 6.64ALVIYY54 pKa = 9.88HH55 pKa = 7.02LKK57 pKa = 8.8QNYY60 pKa = 7.14MPWHH64 pKa = 5.24VHH66 pKa = 4.57RR67 pKa = 11.84QYY69 pKa = 11.36LYY71 pKa = 8.09TWVWKK76 pKa = 9.88HH77 pKa = 5.51

Molecular weight: 9.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

115

0

115

48243

67

2276

419.5

47.62

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.749 ± 0.134

2.608 ± 0.147

5.317 ± 0.185

4.954 ± 0.14

4.931 ± 0.19

4.562 ± 0.184

2.651 ± 0.108

6.523 ± 0.221

5.047 ± 0.149

9.697 ± 0.249

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.566 ± 0.116

5.584 ± 0.159

4.542 ± 0.209

3.254 ± 0.197

5.029 ± 0.178

8.538 ± 0.341

7.406 ± 0.312

6.855 ± 0.132

0.939 ± 0.069

4.247 ± 0.194
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski