Amino acid dipepetide frequency for Wenzhou narna-like virus 9

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.389AlaAla: 2.389 ± 0.0
0.796AlaCys: 0.796 ± 0.0
2.389AlaAsp: 2.389 ± 0.0
2.389AlaGlu: 2.389 ± 0.0
0.796AlaPhe: 0.796 ± 0.0
1.592AlaGly: 1.592 ± 0.0
0.0AlaHis: 0.0 ± 0.0
3.185AlaIle: 3.185 ± 0.0
3.981AlaLys: 3.981 ± 0.0
7.166AlaLeu: 7.166 ± 0.0
1.592AlaMet: 1.592 ± 0.0
3.185AlaAsn: 3.185 ± 0.0
1.592AlaPro: 1.592 ± 0.0
1.592AlaGln: 1.592 ± 0.0
2.389AlaArg: 2.389 ± 0.0
5.573AlaSer: 5.573 ± 0.0
2.389AlaThr: 2.389 ± 0.0
0.796AlaVal: 0.796 ± 0.0
1.592AlaTrp: 1.592 ± 0.0
1.592AlaTyr: 1.592 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.592CysAla: 1.592 ± 0.0
0.796CysCys: 0.796 ± 0.0
0.0CysAsp: 0.0 ± 0.0
1.592CysGlu: 1.592 ± 0.0
0.796CysPhe: 0.796 ± 0.0
1.592CysGly: 1.592 ± 0.0
0.0CysHis: 0.0 ± 0.0
2.389CysIle: 2.389 ± 0.0
0.796CysLys: 0.796 ± 0.0
3.185CysLeu: 3.185 ± 0.0
0.796CysMet: 0.796 ± 0.0
2.389CysAsn: 2.389 ± 0.0
0.796CysPro: 0.796 ± 0.0
1.592CysGln: 1.592 ± 0.0
0.796CysArg: 0.796 ± 0.0
1.592CysSer: 1.592 ± 0.0
0.796CysThr: 0.796 ± 0.0
1.592CysVal: 1.592 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.796CysTyr: 0.796 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.389AspAla: 2.389 ± 0.0
0.796AspCys: 0.796 ± 0.0
4.777AspAsp: 4.777 ± 0.0
3.185AspGlu: 3.185 ± 0.0
3.981AspPhe: 3.981 ± 0.0
3.981AspGly: 3.981 ± 0.0
1.592AspHis: 1.592 ± 0.0
4.777AspIle: 4.777 ± 0.0
3.185AspLys: 3.185 ± 0.0
4.777AspLeu: 4.777 ± 0.0
0.0AspMet: 0.0 ± 0.0
1.592AspAsn: 1.592 ± 0.0
4.777AspPro: 4.777 ± 0.0
0.796AspGln: 0.796 ± 0.0
0.796AspArg: 0.796 ± 0.0
5.573AspSer: 5.573 ± 0.0
4.777AspThr: 4.777 ± 0.0
2.389AspVal: 2.389 ± 0.0
0.0AspTrp: 0.0 ± 0.0
2.389AspTyr: 2.389 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.777GluAla: 4.777 ± 0.0
0.796GluCys: 0.796 ± 0.0
6.369GluAsp: 6.369 ± 0.0
5.573GluGlu: 5.573 ± 0.0
2.389GluPhe: 2.389 ± 0.0
5.573GluGly: 5.573 ± 0.0
0.796GluHis: 0.796 ± 0.0
2.389GluIle: 2.389 ± 0.0
4.777GluLys: 4.777 ± 0.0
6.369GluLeu: 6.369 ± 0.0
1.592GluMet: 1.592 ± 0.0
4.777GluAsn: 4.777 ± 0.0
5.573GluPro: 5.573 ± 0.0
0.796GluGln: 0.796 ± 0.0
3.981GluArg: 3.981 ± 0.0
4.777GluSer: 4.777 ± 0.0
1.592GluThr: 1.592 ± 0.0
5.573GluVal: 5.573 ± 0.0
0.0GluTrp: 0.0 ± 0.0
1.592GluTyr: 1.592 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.185PheAla: 3.185 ± 0.0
4.777PheCys: 4.777 ± 0.0
0.796PheAsp: 0.796 ± 0.0
2.389PheGlu: 2.389 ± 0.0
0.796PhePhe: 0.796 ± 0.0
4.777PheGly: 4.777 ± 0.0
1.592PheHis: 1.592 ± 0.0
3.981PheIle: 3.981 ± 0.0
0.796PheLys: 0.796 ± 0.0
3.981PheLeu: 3.981 ± 0.0
0.0PheMet: 0.0 ± 0.0
0.796PheAsn: 0.796 ± 0.0
3.185PhePro: 3.185 ± 0.0
2.389PheGln: 2.389 ± 0.0
0.796PheArg: 0.796 ± 0.0
1.592PheSer: 1.592 ± 0.0
1.592PheThr: 1.592 ± 0.0
2.389PheVal: 2.389 ± 0.0
0.0PheTrp: 0.0 ± 0.0
0.796PheTyr: 0.796 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.981GlyAla: 3.981 ± 0.0
0.0GlyCys: 0.0 ± 0.0
5.573GlyAsp: 5.573 ± 0.0
5.573GlyGlu: 5.573 ± 0.0
0.0GlyPhe: 0.0 ± 0.0
2.389GlyGly: 2.389 ± 0.0
0.796GlyHis: 0.796 ± 0.0
3.981GlyIle: 3.981 ± 0.0
3.981GlyLys: 3.981 ± 0.0
9.554GlyLeu: 9.554 ± 0.0
0.0GlyMet: 0.0 ± 0.0
0.796GlyAsn: 0.796 ± 0.0
0.796GlyPro: 0.796 ± 0.0
1.592GlyGln: 1.592 ± 0.0
7.962GlyArg: 7.962 ± 0.0
7.166GlySer: 7.166 ± 0.0
1.592GlyThr: 1.592 ± 0.0
3.981GlyVal: 3.981 ± 0.0
0.0GlyTrp: 0.0 ± 0.0
1.592GlyTyr: 1.592 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.592HisAla: 1.592 ± 0.0
1.592HisCys: 1.592 ± 0.0
0.0HisAsp: 0.0 ± 0.0
1.592HisGlu: 1.592 ± 0.0
1.592HisPhe: 1.592 ± 0.0
2.389HisGly: 2.389 ± 0.0
0.0HisHis: 0.0 ± 0.0
1.592HisIle: 1.592 ± 0.0
0.796HisLys: 0.796 ± 0.0
0.796HisLeu: 0.796 ± 0.0
0.0HisMet: 0.0 ± 0.0
2.389HisAsn: 2.389 ± 0.0
0.0HisPro: 0.0 ± 0.0
0.0HisGln: 0.0 ± 0.0
3.185HisArg: 3.185 ± 0.0
0.796HisSer: 0.796 ± 0.0
2.389HisThr: 2.389 ± 0.0
0.796HisVal: 0.796 ± 0.0
0.796HisTrp: 0.796 ± 0.0
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
0.0IleAla: 0.0 ± 0.0
0.796IleCys: 0.796 ± 0.0
2.389IleAsp: 2.389 ± 0.0
2.389IleGlu: 2.389 ± 0.0
2.389IlePhe: 2.389 ± 0.0
2.389IleGly: 2.389 ± 0.0
1.592IleHis: 1.592 ± 0.0
1.592IleIle: 1.592 ± 0.0
1.592IleLys: 1.592 ± 0.0
3.981IleLeu: 3.981 ± 0.0
0.796IleMet: 0.796 ± 0.0
1.592IleAsn: 1.592 ± 0.0
3.185IlePro: 3.185 ± 0.0
1.592IleGln: 1.592 ± 0.0
3.981IleArg: 3.981 ± 0.0
5.573IleSer: 5.573 ± 0.0
3.185IleThr: 3.185 ± 0.0
3.981IleVal: 3.981 ± 0.0
0.796IleTrp: 0.796 ± 0.0
1.592IleTyr: 1.592 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
1.592LysAla: 1.592 ± 0.0
0.796LysCys: 0.796 ± 0.0
3.185LysAsp: 3.185 ± 0.0
3.981LysGlu: 3.981 ± 0.0
3.981LysPhe: 3.981 ± 0.0
6.369LysGly: 6.369 ± 0.0
0.796LysHis: 0.796 ± 0.0
1.592LysIle: 1.592 ± 0.0
3.185LysLys: 3.185 ± 0.0
5.573LysLeu: 5.573 ± 0.0
0.0LysMet: 0.0 ± 0.0
1.592LysAsn: 1.592 ± 0.0
1.592LysPro: 1.592 ± 0.0
0.796LysGln: 0.796 ± 0.0
1.592LysArg: 1.592 ± 0.0
4.777LysSer: 4.777 ± 0.0
5.573LysThr: 5.573 ± 0.0
3.981LysVal: 3.981 ± 0.0
1.592LysTrp: 1.592 ± 0.0
0.796LysTyr: 0.796 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
5.573LeuAla: 5.573 ± 0.0
4.777LeuCys: 4.777 ± 0.0
4.777LeuAsp: 4.777 ± 0.0
5.573LeuGlu: 5.573 ± 0.0
3.185LeuPhe: 3.185 ± 0.0
3.185LeuGly: 3.185 ± 0.0
1.592LeuHis: 1.592 ± 0.0
2.389LeuIle: 2.389 ± 0.0
8.758LeuLys: 8.758 ± 0.0
8.758LeuLeu: 8.758 ± 0.0
2.389LeuMet: 2.389 ± 0.0
1.592LeuAsn: 1.592 ± 0.0
6.369LeuPro: 6.369 ± 0.0
4.777LeuGln: 4.777 ± 0.0
8.758LeuArg: 8.758 ± 0.0
13.535LeuSer: 13.535 ± 0.0
7.962LeuThr: 7.962 ± 0.0
5.573LeuVal: 5.573 ± 0.0
0.796LeuTrp: 0.796 ± 0.0
3.185LeuTyr: 3.185 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
3.185MetAla: 3.185 ± 0.0
0.0MetCys: 0.0 ± 0.0
1.592MetAsp: 1.592 ± 0.0
2.389MetGlu: 2.389 ± 0.0
0.0MetPhe: 0.0 ± 0.0
1.592MetGly: 1.592 ± 0.0
0.0MetHis: 0.0 ± 0.0
0.0MetIle: 0.0 ± 0.0
0.796MetLys: 0.796 ± 0.0
2.389MetLeu: 2.389 ± 0.0
0.0MetMet: 0.0 ± 0.0
0.0MetAsn: 0.0 ± 0.0
0.796MetPro: 0.796 ± 0.0
0.0MetGln: 0.0 ± 0.0
1.592MetArg: 1.592 ± 0.0
2.389MetSer: 2.389 ± 0.0
0.796MetThr: 0.796 ± 0.0
2.389MetVal: 2.389 ± 0.0
1.592MetTrp: 1.592 ± 0.0
0.796MetTyr: 0.796 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
0.796AsnAla: 0.796 ± 0.0
0.0AsnCys: 0.0 ± 0.0
0.796AsnAsp: 0.796 ± 0.0
0.796AsnGlu: 0.796 ± 0.0
2.389AsnPhe: 2.389 ± 0.0
1.592AsnGly: 1.592 ± 0.0
0.796AsnHis: 0.796 ± 0.0
0.0AsnIle: 0.0 ± 0.0
0.796AsnLys: 0.796 ± 0.0
4.777AsnLeu: 4.777 ± 0.0
0.0AsnMet: 0.0 ± 0.0
0.796AsnAsn: 0.796 ± 0.0
3.185AsnPro: 3.185 ± 0.0
4.777AsnGln: 4.777 ± 0.0
1.592AsnArg: 1.592 ± 0.0
7.166AsnSer: 7.166 ± 0.0
2.389AsnThr: 2.389 ± 0.0
0.0AsnVal: 0.0 ± 0.0
0.0AsnTrp: 0.0 ± 0.0
0.796AsnTyr: 0.796 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.592ProAla: 1.592 ± 0.0
0.0ProCys: 0.0 ± 0.0
0.796ProAsp: 0.796 ± 0.0
6.369ProGlu: 6.369 ± 0.0
0.796ProPhe: 0.796 ± 0.0
4.777ProGly: 4.777 ± 0.0
1.592ProHis: 1.592 ± 0.0
2.389ProIle: 2.389 ± 0.0
0.796ProLys: 0.796 ± 0.0
7.166ProLeu: 7.166 ± 0.0
2.389ProMet: 2.389 ± 0.0
1.592ProAsn: 1.592 ± 0.0
2.389ProPro: 2.389 ± 0.0
1.592ProGln: 1.592 ± 0.0
1.592ProArg: 1.592 ± 0.0
3.185ProSer: 3.185 ± 0.0
2.389ProThr: 2.389 ± 0.0
7.166ProVal: 7.166 ± 0.0
1.592ProTrp: 1.592 ± 0.0
1.592ProTyr: 1.592 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.389GlnAla: 2.389 ± 0.0
0.0GlnCys: 0.0 ± 0.0
3.981GlnAsp: 3.981 ± 0.0
2.389GlnGlu: 2.389 ± 0.0
2.389GlnPhe: 2.389 ± 0.0
1.592GlnGly: 1.592 ± 0.0
0.796GlnHis: 0.796 ± 0.0
0.796GlnIle: 0.796 ± 0.0
2.389GlnLys: 2.389 ± 0.0
3.185GlnLeu: 3.185 ± 0.0
1.592GlnMet: 1.592 ± 0.0
1.592GlnAsn: 1.592 ± 0.0
0.796GlnPro: 0.796 ± 0.0
2.389GlnGln: 2.389 ± 0.0
0.0GlnArg: 0.0 ± 0.0
3.185GlnSer: 3.185 ± 0.0
3.981GlnThr: 3.981 ± 0.0
3.185GlnVal: 3.185 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
1.592GlnTyr: 1.592 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
1.592ArgAla: 1.592 ± 0.0
1.592ArgCys: 1.592 ± 0.0
4.777ArgAsp: 4.777 ± 0.0
3.185ArgGlu: 3.185 ± 0.0
2.389ArgPhe: 2.389 ± 0.0
3.185ArgGly: 3.185 ± 0.0
3.185ArgHis: 3.185 ± 0.0
3.185ArgIle: 3.185 ± 0.0
3.185ArgLys: 3.185 ± 0.0
3.185ArgLeu: 3.185 ± 0.0
3.981ArgMet: 3.981 ± 0.0
3.185ArgAsn: 3.185 ± 0.0
3.185ArgPro: 3.185 ± 0.0
3.981ArgGln: 3.981 ± 0.0
6.369ArgArg: 6.369 ± 0.0
3.185ArgSer: 3.185 ± 0.0
4.777ArgThr: 4.777 ± 0.0
3.981ArgVal: 3.981 ± 0.0
0.796ArgTrp: 0.796 ± 0.0
2.389ArgTyr: 2.389 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
1.592SerAla: 1.592 ± 0.0
2.389SerCys: 2.389 ± 0.0
4.777SerAsp: 4.777 ± 0.0
6.369SerGlu: 6.369 ± 0.0
4.777SerPhe: 4.777 ± 0.0
5.573SerGly: 5.573 ± 0.0
0.796SerHis: 0.796 ± 0.0
3.185SerIle: 3.185 ± 0.0
2.389SerLys: 2.389 ± 0.0
15.924SerLeu: 15.924 ± 0.0
3.185SerMet: 3.185 ± 0.0
0.796SerAsn: 0.796 ± 0.0
3.185SerPro: 3.185 ± 0.0
6.369SerGln: 6.369 ± 0.0
6.369SerArg: 6.369 ± 0.0
4.777SerSer: 4.777 ± 0.0
6.369SerThr: 6.369 ± 0.0
5.573SerVal: 5.573 ± 0.0
0.796SerTrp: 0.796 ± 0.0
3.185SerTyr: 3.185 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
3.185ThrAla: 3.185 ± 0.0
0.0ThrCys: 0.0 ± 0.0
3.185ThrAsp: 3.185 ± 0.0
3.981ThrGlu: 3.981 ± 0.0
6.369ThrPhe: 6.369 ± 0.0
3.981ThrGly: 3.981 ± 0.0
3.981ThrHis: 3.981 ± 0.0
1.592ThrIle: 1.592 ± 0.0
3.981ThrLys: 3.981 ± 0.0
6.369ThrLeu: 6.369 ± 0.0
0.0ThrMet: 0.0 ± 0.0
2.389ThrAsn: 2.389 ± 0.0
1.592ThrPro: 1.592 ± 0.0
0.796ThrGln: 0.796 ± 0.0
3.185ThrArg: 3.185 ± 0.0
6.369ThrSer: 6.369 ± 0.0
3.981ThrThr: 3.981 ± 0.0
4.777ThrVal: 4.777 ± 0.0
1.592ThrTrp: 1.592 ± 0.0
2.389ThrTyr: 2.389 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
3.981ValAla: 3.981 ± 0.0
1.592ValCys: 1.592 ± 0.0
3.185ValAsp: 3.185 ± 0.0
7.962ValGlu: 7.962 ± 0.0
0.0ValPhe: 0.0 ± 0.0
1.592ValGly: 1.592 ± 0.0
1.592ValHis: 1.592 ± 0.0
3.185ValIle: 3.185 ± 0.0
5.573ValLys: 5.573 ± 0.0
1.592ValLeu: 1.592 ± 0.0
2.389ValMet: 2.389 ± 0.0
2.389ValAsn: 2.389 ± 0.0
7.166ValPro: 7.166 ± 0.0
0.796ValGln: 0.796 ± 0.0
7.166ValArg: 7.166 ± 0.0
4.777ValSer: 4.777 ± 0.0
4.777ValThr: 4.777 ± 0.0
3.981ValVal: 3.981 ± 0.0
1.592ValTrp: 1.592 ± 0.0
3.185ValTyr: 3.185 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.796TrpAla: 0.796 ± 0.0
1.592TrpCys: 1.592 ± 0.0
0.796TrpAsp: 0.796 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.0TrpPhe: 0.0 ± 0.0
1.592TrpGly: 1.592 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.796TrpIle: 0.796 ± 0.0
0.796TrpLys: 0.796 ± 0.0
0.796TrpLeu: 0.796 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
1.592TrpGln: 1.592 ± 0.0
0.796TrpArg: 0.796 ± 0.0
0.0TrpSer: 0.0 ± 0.0
0.796TrpThr: 0.796 ± 0.0
3.185TrpVal: 3.185 ± 0.0
0.796TrpTrp: 0.796 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.796TyrAla: 0.796 ± 0.0
0.796TyrCys: 0.796 ± 0.0
2.389TyrAsp: 2.389 ± 0.0
2.389TyrGlu: 2.389 ± 0.0
1.592TyrPhe: 1.592 ± 0.0
1.592TyrGly: 1.592 ± 0.0
0.796TyrHis: 0.796 ± 0.0
2.389TyrIle: 2.389 ± 0.0
0.796TyrLys: 0.796 ± 0.0
3.981TyrLeu: 3.981 ± 0.0
0.796TyrMet: 0.796 ± 0.0
0.0TyrAsn: 0.0 ± 0.0
1.592TyrPro: 1.592 ± 0.0
0.0TyrGln: 0.0 ± 0.0
2.389TyrArg: 2.389 ± 0.0
2.389TyrSer: 2.389 ± 0.0
2.389TyrThr: 2.389 ± 0.0
3.185TyrVal: 3.185 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
0.0TyrTyr: 0.0 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1257 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski