Aspergillus ustus
Average proteome isoelectric point is 6.11
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 706 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A0C1E646|A0A0C1E646_ASPUT C6 zinc finger domain-containing protein OS=Aspergillus ustus OX=40382 GN=HK57_00612 PE=4 SV=1
MM1 pKa = 7.66 RR2 pKa = 11.84 FSVLAFIALTASVMASDD19 pKa = 5.54 DD20 pKa = 4.13 PGPSPTEE27 pKa = 4.06 SIGCEE32 pKa = 3.46 PHH34 pKa = 6.72 GDD36 pKa = 3.33 HH37 pKa = 6.46 WHH39 pKa = 7.11 CDD41 pKa = 3.34 APATSTLATTTSSTSEE57 pKa = 3.89 SDD59 pKa = 3.43 EE60 pKa = 4.85 DD61 pKa = 4.46 DD62 pKa = 4.06 SSVTPGPSPTEE73 pKa = 4.12 SIGCEE78 pKa = 3.46 PHH80 pKa = 6.57 GDD82 pKa = 3.25 HH83 pKa = 6.39 WHH85 pKa = 6.9 CEE87 pKa = 3.79 AAATDD92 pKa = 3.49 VDD94 pKa = 4.34 EE95 pKa = 5.13 EE96 pKa = 4.82 DD97 pKa = 4.01 EE98 pKa = 4.6 SVTPGPSPTEE108 pKa = 4.12 SIGCEE113 pKa = 3.46 PHH115 pKa = 6.72 GDD117 pKa = 3.33 HH118 pKa = 6.46 WHH120 pKa = 7.11 CDD122 pKa = 3.36 APATTTTDD130 pKa = 3.12 SDD132 pKa = 4.43 SEE134 pKa = 4.64 SSTSAAADD142 pKa = 3.69 EE143 pKa = 5.27 DD144 pKa = 4.56 SSSVTPPPSPTEE156 pKa = 4.04 SVGCEE161 pKa = 3.43 PHH163 pKa = 6.8 GDD165 pKa = 3.13 HH166 pKa = 6.47 WHH168 pKa = 6.95 CDD170 pKa = 3.55 GPRR173 pKa = 11.84 EE174 pKa = 4.0 TDD176 pKa = 3.03 EE177 pKa = 4.27 ATEE180 pKa = 4.22 SSSNATSTTEE190 pKa = 3.46 EE191 pKa = 4.23 GAAEE195 pKa = 4.0 EE196 pKa = 4.41 TGDD199 pKa = 4.76 DD200 pKa = 3.79 EE201 pKa = 4.82 DD202 pKa = 3.91 AAGIVGVKK210 pKa = 10.27 LSGVVAVAVAAAAALLL226 pKa = 4.0
Molecular weight: 22.94 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.759
IPC2_protein 3.795
IPC_protein 3.783
Toseland 3.579
ProMoST 3.935
Dawson 3.77
Bjellqvist 3.923
Wikipedia 3.668
Rodwell 3.617
Grimsley 3.49
Solomon 3.757
Lehninger 3.719
Nozaki 3.872
DTASelect 4.075
Thurlkill 3.63
EMBOSS 3.694
Sillero 3.91
Patrickios 0.604
IPC_peptide 3.757
IPC2_peptide 3.884
IPC2.peptide.svr19 3.784
Protein with the highest isoelectric point:
>tr|A0A0C1E790|A0A0C1E790_ASPUT Integral membrane protein OS=Aspergillus ustus OX=40382 GN=HK57_00165 PE=4 SV=1
MM1 pKa = 7.59 SRR3 pKa = 11.84 GLSALHH9 pKa = 6.39 SLLPTVEE16 pKa = 4.03 KK17 pKa = 10.75 KK18 pKa = 9.88 KK19 pKa = 10.68 AKK21 pKa = 9.93 KK22 pKa = 9.45 PRR24 pKa = 11.84 PLHH27 pKa = 6.07 TIGTSKK33 pKa = 10.69 KK34 pKa = 9.32 NPIRR38 pKa = 11.84 QDD40 pKa = 3.42 EE41 pKa = 4.3 PPIQCRR47 pKa = 11.84 YY48 pKa = 6.47 NTHH51 pKa = 5.66 AHH53 pKa = 3.93 VHH55 pKa = 5.63 IPINPSPSSRR65 pKa = 11.84 ASTRR69 pKa = 11.84 FLLSLRR75 pKa = 11.84 RR76 pKa = 11.84 RR77 pKa = 11.84 RR78 pKa = 11.84 PRR80 pKa = 11.84 RR81 pKa = 11.84 PARR84 pKa = 11.84 LPRR87 pKa = 11.84 SRR89 pKa = 11.84 AHH91 pKa = 7.07 LPGTLPRR98 pKa = 11.84 PIKK101 pKa = 10.23 ARR103 pKa = 11.84 HH104 pKa = 5.91 LRR106 pKa = 11.84 AQYY109 pKa = 9.63 PSTLIVHH116 pKa = 7.3 RR117 pKa = 11.84 GNAHH121 pKa = 6.0 NVTDD125 pKa = 3.98 VLACLTVPNSSVRR138 pKa = 11.84 QLVSAITFTIGNKK151 pKa = 9.38 PDD153 pKa = 3.63 LKK155 pKa = 11.19 KK156 pKa = 10.38 MGEE159 pKa = 4.21 GDD161 pKa = 3.83 PLVCQKK167 pKa = 10.62 GMAVLLEE174 pKa = 4.28 ALSVLRR180 pKa = 11.84 RR181 pKa = 11.84 DD182 pKa = 3.72 WGVHH186 pKa = 4.73 GQPLLCVVSTTGISEE201 pKa = 4.17 TRR203 pKa = 11.84 DD204 pKa = 3.16 IPLLFYY210 pKa = 10.44 PLYY213 pKa = 9.04 HH214 pKa = 6.62 TLLAVPHH221 pKa = 6.75 RR222 pKa = 11.84 DD223 pKa = 3.27 KK224 pKa = 11.39 KK225 pKa = 10.85 VMEE228 pKa = 4.48 GLLVASGEE236 pKa = 4.17 RR237 pKa = 11.84 FVLVRR242 pKa = 11.84 PSLLWDD248 pKa = 3.51 GEE250 pKa = 4.15 RR251 pKa = 11.84 RR252 pKa = 11.84 KK253 pKa = 10.86 GKK255 pKa = 10.51 GKK257 pKa = 9.96 GNGVVRR263 pKa = 11.84 VGIADD268 pKa = 3.27 ARR270 pKa = 11.84 TGVVEE275 pKa = 4.28 RR276 pKa = 11.84 KK277 pKa = 9.18 EE278 pKa = 3.82 VGYY281 pKa = 8.78 TISRR285 pKa = 11.84 EE286 pKa = 4.13 AVGGWMFEE294 pKa = 3.89 HH295 pKa = 7.31 LILRR299 pKa = 11.84 AGEE302 pKa = 3.95 KK303 pKa = 10.76 GLVFEE308 pKa = 5.05 EE309 pKa = 4.73 KK310 pKa = 10.4 AVSLTWW316 pKa = 3.56
Molecular weight: 35.17 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.323
IPC2_protein 9.765
IPC_protein 10.716
Toseland 11.038
ProMoST 10.906
Dawson 11.082
Bjellqvist 10.847
Wikipedia 11.345
Rodwell 11.257
Grimsley 11.125
Solomon 11.316
Lehninger 11.257
Nozaki 11.023
DTASelect 10.847
Thurlkill 11.023
EMBOSS 11.462
Sillero 11.038
Patrickios 10.965
IPC_peptide 11.316
IPC2_peptide 9.97
IPC2.peptide.svr19 8.719
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
706
0
706
453076
70
6946
641.8
70.71
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
9.096 ± 0.079
1.396 ± 0.028
5.406 ± 0.046
5.64 ± 0.059
3.925 ± 0.042
7.189 ± 0.063
2.555 ± 0.028
5.417 ± 0.055
3.673 ± 0.046
9.866 ± 0.061
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.072 ± 0.028
3.353 ± 0.035
5.507 ± 0.062
3.834 ± 0.043
5.881 ± 0.053
7.884 ± 0.08
6.073 ± 0.047
6.771 ± 0.054
1.593 ± 0.026
2.869 ± 0.041
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here