Amino acid dipepetide frequency for Fusarium poae mycovirus 2

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.712AlaAla: 2.712 ± 0.0
0.904AlaCys: 0.904 ± 0.0
0.904AlaAsp: 0.904 ± 0.0
5.425AlaGlu: 5.425 ± 0.0
2.712AlaPhe: 2.712 ± 0.0
1.808AlaGly: 1.808 ± 0.0
0.904AlaHis: 0.904 ± 0.0
1.808AlaIle: 1.808 ± 0.0
2.712AlaLys: 2.712 ± 0.0
6.329AlaLeu: 6.329 ± 0.0
0.0AlaMet: 0.0 ± 0.0
4.521AlaAsn: 4.521 ± 0.0
4.521AlaPro: 4.521 ± 0.0
0.0AlaGln: 0.0 ± 0.0
2.712AlaArg: 2.712 ± 0.0
5.425AlaSer: 5.425 ± 0.0
6.329AlaThr: 6.329 ± 0.0
1.808AlaVal: 1.808 ± 0.0
0.904AlaTrp: 0.904 ± 0.0
0.904AlaTyr: 0.904 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.808CysAla: 1.808 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.808CysAsp: 1.808 ± 0.0
1.808CysGlu: 1.808 ± 0.0
0.0CysPhe: 0.0 ± 0.0
0.904CysGly: 0.904 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.0CysIle: 0.0 ± 0.0
0.904CysLys: 0.904 ± 0.0
1.808CysLeu: 1.808 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.904CysAsn: 0.904 ± 0.0
0.904CysPro: 0.904 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.904CysArg: 0.904 ± 0.0
0.0CysSer: 0.0 ± 0.0
0.0CysThr: 0.0 ± 0.0
2.712CysVal: 2.712 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.904CysTyr: 0.904 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.617AspAla: 3.617 ± 0.0
0.904AspCys: 0.904 ± 0.0
3.617AspAsp: 3.617 ± 0.0
1.808AspGlu: 1.808 ± 0.0
3.617AspPhe: 3.617 ± 0.0
3.617AspGly: 3.617 ± 0.0
1.808AspHis: 1.808 ± 0.0
2.712AspIle: 2.712 ± 0.0
2.712AspLys: 2.712 ± 0.0
5.425AspLeu: 5.425 ± 0.0
1.808AspMet: 1.808 ± 0.0
1.808AspAsn: 1.808 ± 0.0
3.617AspPro: 3.617 ± 0.0
1.808AspGln: 1.808 ± 0.0
3.617AspArg: 3.617 ± 0.0
3.617AspSer: 3.617 ± 0.0
3.617AspThr: 3.617 ± 0.0
2.712AspVal: 2.712 ± 0.0
0.904AspTrp: 0.904 ± 0.0
4.521AspTyr: 4.521 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.617GluAla: 3.617 ± 0.0
0.0GluCys: 0.0 ± 0.0
2.712GluAsp: 2.712 ± 0.0
3.617GluGlu: 3.617 ± 0.0
3.617GluPhe: 3.617 ± 0.0
0.904GluGly: 0.904 ± 0.0
0.0GluHis: 0.0 ± 0.0
1.808GluIle: 1.808 ± 0.0
7.233GluLys: 7.233 ± 0.0
3.617GluLeu: 3.617 ± 0.0
2.712GluMet: 2.712 ± 0.0
1.808GluAsn: 1.808 ± 0.0
1.808GluPro: 1.808 ± 0.0
2.712GluGln: 2.712 ± 0.0
10.85GluArg: 10.85 ± 0.0
2.712GluSer: 2.712 ± 0.0
3.617GluThr: 3.617 ± 0.0
5.425GluVal: 5.425 ± 0.0
0.904GluTrp: 0.904 ± 0.0
2.712GluTyr: 2.712 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.808PheAla: 1.808 ± 0.0
0.904PheCys: 0.904 ± 0.0
4.521PheAsp: 4.521 ± 0.0
3.617PheGlu: 3.617 ± 0.0
1.808PhePhe: 1.808 ± 0.0
1.808PheGly: 1.808 ± 0.0
1.808PheHis: 1.808 ± 0.0
1.808PheIle: 1.808 ± 0.0
4.521PheLys: 4.521 ± 0.0
7.233PheLeu: 7.233 ± 0.0
0.0PheMet: 0.0 ± 0.0
2.712PheAsn: 2.712 ± 0.0
2.712PhePro: 2.712 ± 0.0
2.712PheGln: 2.712 ± 0.0
2.712PheArg: 2.712 ± 0.0
3.617PheSer: 3.617 ± 0.0
5.425PheThr: 5.425 ± 0.0
4.521PheVal: 4.521 ± 0.0
1.808PheTrp: 1.808 ± 0.0
0.0PheTyr: 0.0 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
8.137GlyAla: 8.137 ± 0.0
0.0GlyCys: 0.0 ± 0.0
4.521GlyAsp: 4.521 ± 0.0
1.808GlyGlu: 1.808 ± 0.0
4.521GlyPhe: 4.521 ± 0.0
3.617GlyGly: 3.617 ± 0.0
3.617GlyHis: 3.617 ± 0.0
3.617GlyIle: 3.617 ± 0.0
4.521GlyLys: 4.521 ± 0.0
2.712GlyLeu: 2.712 ± 0.0
5.425GlyMet: 5.425 ± 0.0
2.712GlyAsn: 2.712 ± 0.0
2.712GlyPro: 2.712 ± 0.0
0.904GlyGln: 0.904 ± 0.0
2.712GlyArg: 2.712 ± 0.0
1.808GlySer: 1.808 ± 0.0
1.808GlyThr: 1.808 ± 0.0
1.808GlyVal: 1.808 ± 0.0
0.904GlyTrp: 0.904 ± 0.0
2.712GlyTyr: 2.712 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.0HisAsp: 0.0 ± 0.0
1.808HisGlu: 1.808 ± 0.0
2.712HisPhe: 2.712 ± 0.0
0.904HisGly: 0.904 ± 0.0
0.0HisHis: 0.0 ± 0.0
1.808HisIle: 1.808 ± 0.0
2.712HisLys: 2.712 ± 0.0
2.712HisLeu: 2.712 ± 0.0
2.712HisMet: 2.712 ± 0.0
2.712HisAsn: 2.712 ± 0.0
0.0HisPro: 0.0 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.904HisArg: 0.904 ± 0.0
2.712HisSer: 2.712 ± 0.0
1.808HisThr: 1.808 ± 0.0
0.0HisVal: 0.0 ± 0.0
0.904HisTrp: 0.904 ± 0.0
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
1.808IleAla: 1.808 ± 0.0
0.904IleCys: 0.904 ± 0.0
1.808IleAsp: 1.808 ± 0.0
0.904IleGlu: 0.904 ± 0.0
0.904IlePhe: 0.904 ± 0.0
4.521IleGly: 4.521 ± 0.0
1.808IleHis: 1.808 ± 0.0
1.808IleIle: 1.808 ± 0.0
4.521IleLys: 4.521 ± 0.0
3.617IleLeu: 3.617 ± 0.0
2.712IleMet: 2.712 ± 0.0
1.808IleAsn: 1.808 ± 0.0
1.808IlePro: 1.808 ± 0.0
1.808IleGln: 1.808 ± 0.0
2.712IleArg: 2.712 ± 0.0
1.808IleSer: 1.808 ± 0.0
1.808IleThr: 1.808 ± 0.0
2.712IleVal: 2.712 ± 0.0
0.0IleTrp: 0.0 ± 0.0
0.0IleTyr: 0.0 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
5.425LysAla: 5.425 ± 0.0
1.808LysCys: 1.808 ± 0.0
1.808LysAsp: 1.808 ± 0.0
1.808LysGlu: 1.808 ± 0.0
2.712LysPhe: 2.712 ± 0.0
7.233LysGly: 7.233 ± 0.0
0.904LysHis: 0.904 ± 0.0
5.425LysIle: 5.425 ± 0.0
5.425LysLys: 5.425 ± 0.0
3.617LysLeu: 3.617 ± 0.0
1.808LysMet: 1.808 ± 0.0
4.521LysAsn: 4.521 ± 0.0
0.904LysPro: 0.904 ± 0.0
0.904LysGln: 0.904 ± 0.0
7.233LysArg: 7.233 ± 0.0
5.425LysSer: 5.425 ± 0.0
6.329LysThr: 6.329 ± 0.0
5.425LysVal: 5.425 ± 0.0
2.712LysTrp: 2.712 ± 0.0
1.808LysTyr: 1.808 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
2.712LeuAla: 2.712 ± 0.0
0.0LeuCys: 0.0 ± 0.0
2.712LeuAsp: 2.712 ± 0.0
7.233LeuGlu: 7.233 ± 0.0
0.904LeuPhe: 0.904 ± 0.0
6.329LeuGly: 6.329 ± 0.0
2.712LeuHis: 2.712 ± 0.0
1.808LeuIle: 1.808 ± 0.0
4.521LeuLys: 4.521 ± 0.0
5.425LeuLeu: 5.425 ± 0.0
0.904LeuMet: 0.904 ± 0.0
9.042LeuAsn: 9.042 ± 0.0
1.808LeuPro: 1.808 ± 0.0
3.617LeuGln: 3.617 ± 0.0
7.233LeuArg: 7.233 ± 0.0
6.329LeuSer: 6.329 ± 0.0
2.712LeuThr: 2.712 ± 0.0
4.521LeuVal: 4.521 ± 0.0
1.808LeuTrp: 1.808 ± 0.0
1.808LeuTyr: 1.808 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.808MetAla: 1.808 ± 0.0
0.0MetCys: 0.0 ± 0.0
0.904MetAsp: 0.904 ± 0.0
3.617MetGlu: 3.617 ± 0.0
2.712MetPhe: 2.712 ± 0.0
3.617MetGly: 3.617 ± 0.0
0.0MetHis: 0.0 ± 0.0
0.904MetIle: 0.904 ± 0.0
1.808MetLys: 1.808 ± 0.0
1.808MetLeu: 1.808 ± 0.0
0.0MetMet: 0.0 ± 0.0
0.0MetAsn: 0.0 ± 0.0
0.904MetPro: 0.904 ± 0.0
0.0MetGln: 0.0 ± 0.0
4.521MetArg: 4.521 ± 0.0
3.617MetSer: 3.617 ± 0.0
0.904MetThr: 0.904 ± 0.0
1.808MetVal: 1.808 ± 0.0
0.904MetTrp: 0.904 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
0.904AsnAla: 0.904 ± 0.0
2.712AsnCys: 2.712 ± 0.0
2.712AsnAsp: 2.712 ± 0.0
0.904AsnGlu: 0.904 ± 0.0
3.617AsnPhe: 3.617 ± 0.0
1.808AsnGly: 1.808 ± 0.0
0.904AsnHis: 0.904 ± 0.0
1.808AsnIle: 1.808 ± 0.0
3.617AsnLys: 3.617 ± 0.0
3.617AsnLeu: 3.617 ± 0.0
0.0AsnMet: 0.0 ± 0.0
1.808AsnAsn: 1.808 ± 0.0
7.233AsnPro: 7.233 ± 0.0
3.617AsnGln: 3.617 ± 0.0
4.521AsnArg: 4.521 ± 0.0
3.617AsnSer: 3.617 ± 0.0
4.521AsnThr: 4.521 ± 0.0
1.808AsnVal: 1.808 ± 0.0
2.712AsnTrp: 2.712 ± 0.0
0.904AsnTyr: 0.904 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
0.904ProAla: 0.904 ± 0.0
1.808ProCys: 1.808 ± 0.0
2.712ProAsp: 2.712 ± 0.0
0.904ProGlu: 0.904 ± 0.0
3.617ProPhe: 3.617 ± 0.0
2.712ProGly: 2.712 ± 0.0
0.904ProHis: 0.904 ± 0.0
1.808ProIle: 1.808 ± 0.0
3.617ProLys: 3.617 ± 0.0
1.808ProLeu: 1.808 ± 0.0
0.904ProMet: 0.904 ± 0.0
0.904ProAsn: 0.904 ± 0.0
1.808ProPro: 1.808 ± 0.0
1.808ProGln: 1.808 ± 0.0
2.712ProArg: 2.712 ± 0.0
2.712ProSer: 2.712 ± 0.0
0.904ProThr: 0.904 ± 0.0
1.808ProVal: 1.808 ± 0.0
0.904ProTrp: 0.904 ± 0.0
4.521ProTyr: 4.521 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
0.904GlnAla: 0.904 ± 0.0
0.904GlnCys: 0.904 ± 0.0
1.808GlnAsp: 1.808 ± 0.0
0.0GlnGlu: 0.0 ± 0.0
5.425GlnPhe: 5.425 ± 0.0
0.904GlnGly: 0.904 ± 0.0
0.904GlnHis: 0.904 ± 0.0
0.0GlnIle: 0.0 ± 0.0
5.425GlnLys: 5.425 ± 0.0
2.712GlnLeu: 2.712 ± 0.0
0.904GlnMet: 0.904 ± 0.0
0.904GlnAsn: 0.904 ± 0.0
0.0GlnPro: 0.0 ± 0.0
3.617GlnGln: 3.617 ± 0.0
5.425GlnArg: 5.425 ± 0.0
2.712GlnSer: 2.712 ± 0.0
0.904GlnThr: 0.904 ± 0.0
1.808GlnVal: 1.808 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
0.904GlnTyr: 0.904 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
4.521ArgAla: 4.521 ± 0.0
2.712ArgCys: 2.712 ± 0.0
8.137ArgAsp: 8.137 ± 0.0
8.137ArgGlu: 8.137 ± 0.0
3.617ArgPhe: 3.617 ± 0.0
3.617ArgGly: 3.617 ± 0.0
0.904ArgHis: 0.904 ± 0.0
4.521ArgIle: 4.521 ± 0.0
1.808ArgLys: 1.808 ± 0.0
8.137ArgLeu: 8.137 ± 0.0
7.233ArgMet: 7.233 ± 0.0
0.904ArgAsn: 0.904 ± 0.0
1.808ArgPro: 1.808 ± 0.0
4.521ArgGln: 4.521 ± 0.0
2.712ArgArg: 2.712 ± 0.0
5.425ArgSer: 5.425 ± 0.0
1.808ArgThr: 1.808 ± 0.0
3.617ArgVal: 3.617 ± 0.0
1.808ArgTrp: 1.808 ± 0.0
3.617ArgTyr: 3.617 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.617SerAla: 3.617 ± 0.0
0.0SerCys: 0.0 ± 0.0
2.712SerAsp: 2.712 ± 0.0
3.617SerGlu: 3.617 ± 0.0
4.521SerPhe: 4.521 ± 0.0
6.329SerGly: 6.329 ± 0.0
1.808SerHis: 1.808 ± 0.0
1.808SerIle: 1.808 ± 0.0
7.233SerLys: 7.233 ± 0.0
3.617SerLeu: 3.617 ± 0.0
0.0SerMet: 0.0 ± 0.0
2.712SerAsn: 2.712 ± 0.0
1.808SerPro: 1.808 ± 0.0
2.712SerGln: 2.712 ± 0.0
3.617SerArg: 3.617 ± 0.0
6.329SerSer: 6.329 ± 0.0
3.617SerThr: 3.617 ± 0.0
4.521SerVal: 4.521 ± 0.0
0.904SerTrp: 0.904 ± 0.0
5.425SerTyr: 5.425 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
2.712ThrAla: 2.712 ± 0.0
0.0ThrCys: 0.0 ± 0.0
0.904ThrAsp: 0.904 ± 0.0
1.808ThrGlu: 1.808 ± 0.0
3.617ThrPhe: 3.617 ± 0.0
2.712ThrGly: 2.712 ± 0.0
0.904ThrHis: 0.904 ± 0.0
4.521ThrIle: 4.521 ± 0.0
1.808ThrLys: 1.808 ± 0.0
2.712ThrLeu: 2.712 ± 0.0
0.0ThrMet: 0.0 ± 0.0
6.329ThrAsn: 6.329 ± 0.0
2.712ThrPro: 2.712 ± 0.0
0.904ThrGln: 0.904 ± 0.0
5.425ThrArg: 5.425 ± 0.0
1.808ThrSer: 1.808 ± 0.0
0.904ThrThr: 0.904 ± 0.0
9.042ThrVal: 9.042 ± 0.0
0.904ThrTrp: 0.904 ± 0.0
2.712ThrTyr: 2.712 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
0.904ValAla: 0.904 ± 0.0
0.904ValCys: 0.904 ± 0.0
6.329ValAsp: 6.329 ± 0.0
8.137ValGlu: 8.137 ± 0.0
3.617ValPhe: 3.617 ± 0.0
2.712ValGly: 2.712 ± 0.0
2.712ValHis: 2.712 ± 0.0
0.0ValIle: 0.0 ± 0.0
5.425ValLys: 5.425 ± 0.0
3.617ValLeu: 3.617 ± 0.0
1.808ValMet: 1.808 ± 0.0
3.617ValAsn: 3.617 ± 0.0
2.712ValPro: 2.712 ± 0.0
0.904ValGln: 0.904 ± 0.0
7.233ValArg: 7.233 ± 0.0
4.521ValSer: 4.521 ± 0.0
3.617ValThr: 3.617 ± 0.0
5.425ValVal: 5.425 ± 0.0
0.904ValTrp: 0.904 ± 0.0
2.712ValTyr: 2.712 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.808TrpAla: 1.808 ± 0.0
0.0TrpCys: 0.0 ± 0.0
4.521TrpAsp: 4.521 ± 0.0
1.808TrpGlu: 1.808 ± 0.0
1.808TrpPhe: 1.808 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.904TrpHis: 0.904 ± 0.0
0.0TrpIle: 0.0 ± 0.0
1.808TrpLys: 1.808 ± 0.0
0.0TrpLeu: 0.0 ± 0.0
0.0TrpMet: 0.0 ± 0.0
2.712TrpAsn: 2.712 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.904TrpArg: 0.904 ± 0.0
0.0TrpSer: 0.0 ± 0.0
1.808TrpThr: 1.808 ± 0.0
1.808TrpVal: 1.808 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.617TyrAla: 3.617 ± 0.0
0.904TyrCys: 0.904 ± 0.0
3.617TyrAsp: 3.617 ± 0.0
3.617TyrGlu: 3.617 ± 0.0
0.0TyrPhe: 0.0 ± 0.0
4.521TyrGly: 4.521 ± 0.0
0.904TyrHis: 0.904 ± 0.0
1.808TyrIle: 1.808 ± 0.0
0.904TyrLys: 0.904 ± 0.0
3.617TyrLeu: 3.617 ± 0.0
0.0TyrMet: 0.0 ± 0.0
0.904TyrAsn: 0.904 ± 0.0
0.0TyrPro: 0.0 ± 0.0
3.617TyrGln: 3.617 ± 0.0
0.904TyrArg: 0.904 ± 0.0
2.712TyrSer: 2.712 ± 0.0
0.0TyrThr: 0.0 ± 0.0
4.521TyrVal: 4.521 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
0.904TyrTyr: 0.904 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1107 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski