Seal anellovirus 6

Taxonomy: Viruses; Anelloviridae; Lambdatorquevirus; Torque teno pinniped virus 3

Average proteome isoelectric point is 6.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A7TWN7|A0A0A7TWN7_9VIRU Capsid protein OS=Seal anellovirus 6 OX=1566012 PE=3 SV=1
MM1 pKa = 7.22TKK3 pKa = 9.64SHH5 pKa = 6.56SGFAIVSNLRR15 pKa = 11.84SLEE18 pKa = 4.11TLSTEE23 pKa = 4.16DD24 pKa = 3.43YY25 pKa = 10.22RR26 pKa = 11.84RR27 pKa = 11.84SAIQTPSLKK36 pKa = 10.42HH37 pKa = 5.51QEE39 pKa = 4.2LKK41 pKa = 9.59TKK43 pKa = 10.43YY44 pKa = 9.95RR45 pKa = 11.84LAPYY49 pKa = 10.36SKK51 pKa = 10.89LDD53 pKa = 3.57LSTLGTYY60 pKa = 10.81LKK62 pKa = 9.86GTSRR66 pKa = 11.84TAASRR71 pKa = 11.84KK72 pKa = 9.14RR73 pKa = 11.84VLEE76 pKa = 3.87EE77 pKa = 3.77LLDD80 pKa = 4.76LIEE83 pKa = 5.76EE84 pKa = 4.47DD85 pKa = 5.1SQPNWQTQAQDD96 pKa = 3.19VSDD99 pKa = 4.88FSTTPGSEE107 pKa = 4.12SEE109 pKa = 4.3EE110 pKa = 4.34SDD112 pKa = 3.85VSYY115 pKa = 11.0LGYY118 pKa = 10.14WSDD121 pKa = 3.69EE122 pKa = 4.11EE123 pKa = 4.57NPGGEE128 pKa = 4.57GPPLVPPTPGPKK140 pKa = 9.67APEE143 pKa = 4.12YY144 pKa = 9.67PPHH147 pKa = 6.74FLFLTLQQ154 pKa = 3.44

Molecular weight: 17.18 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A7U2J0|A0A0A7U2J0_9VIRU ORF2 OS=Seal anellovirus 6 OX=1566012 PE=4 SV=1
MM1 pKa = 8.06AYY3 pKa = 9.86RR4 pKa = 11.84HH5 pKa = 5.89RR6 pKa = 11.84RR7 pKa = 11.84PFRR10 pKa = 11.84RR11 pKa = 11.84YY12 pKa = 8.17RR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84YY16 pKa = 8.05PRR18 pKa = 11.84WKK20 pKa = 9.02GRR22 pKa = 11.84RR23 pKa = 11.84VHH25 pKa = 6.89RR26 pKa = 11.84RR27 pKa = 11.84HH28 pKa = 4.57TWRR31 pKa = 11.84PFHH34 pKa = 6.37HH35 pKa = 5.93WRR37 pKa = 11.84RR38 pKa = 11.84WRR40 pKa = 11.84RR41 pKa = 11.84RR42 pKa = 11.84PYY44 pKa = 10.28RR45 pKa = 11.84RR46 pKa = 11.84GTVAVRR52 pKa = 11.84YY53 pKa = 6.78TNPRR57 pKa = 11.84RR58 pKa = 11.84HH59 pKa = 6.27KK60 pKa = 9.57YY61 pKa = 9.98ISVTGWEE68 pKa = 4.29PLGNCCIQDD77 pKa = 3.64KK78 pKa = 10.97ASDD81 pKa = 3.62EE82 pKa = 4.1ATPYY86 pKa = 10.97EE87 pKa = 4.74DD88 pKa = 5.44LDD90 pKa = 4.5SDD92 pKa = 4.05VQTWANRR99 pKa = 11.84TRR101 pKa = 11.84TAGIWHH107 pKa = 6.55GTYY110 pKa = 9.59GHH112 pKa = 7.25HH113 pKa = 6.74YY114 pKa = 8.98PWQLLCQRR122 pKa = 11.84AQFYY126 pKa = 10.62FCTFSSGWKK135 pKa = 10.23GYY137 pKa = 10.82DD138 pKa = 3.13YY139 pKa = 11.25LQFYY143 pKa = 10.05GGNIWLPKK151 pKa = 9.62LAAPYY156 pKa = 8.73FFWVDD161 pKa = 3.42PTVQDD166 pKa = 4.03PKK168 pKa = 10.34KK169 pKa = 10.4SSYY172 pKa = 10.87EE173 pKa = 4.11SLCEE177 pKa = 4.19GQDD180 pKa = 3.51LVPPRR185 pKa = 11.84GIHH188 pKa = 4.62EE189 pKa = 4.39QKK191 pKa = 9.93GAHH194 pKa = 6.18YY195 pKa = 10.1IPANNEE201 pKa = 3.53SHH203 pKa = 5.66TLKK206 pKa = 10.42GYY208 pKa = 10.45KK209 pKa = 9.49RR210 pKa = 11.84IHH212 pKa = 6.62IKK214 pKa = 10.5RR215 pKa = 11.84LSTWEE220 pKa = 3.77GVYY223 pKa = 10.56AISTAADD230 pKa = 3.82YY231 pKa = 11.22ILVHH235 pKa = 5.98WVWSTVTKK243 pKa = 10.65NWAFFDD249 pKa = 4.43GACYY253 pKa = 9.7QAGQASSDD261 pKa = 3.96TCNSTPWFMSAQTAEE276 pKa = 4.23SGVKK280 pKa = 10.24KK281 pKa = 10.57EE282 pKa = 3.48VDD284 pKa = 3.49EE285 pKa = 4.28YY286 pKa = 11.8KK287 pKa = 9.66KK288 pKa = 9.53TNDD291 pKa = 3.44FKK293 pKa = 11.82NNLYY297 pKa = 10.4CYY299 pKa = 8.62PDD301 pKa = 3.97PRR303 pKa = 11.84ASWVNRR309 pKa = 11.84QKK311 pKa = 11.16YY312 pKa = 9.91NKK314 pKa = 8.6TIQPLTVTEE323 pKa = 4.22NPGGPFLPSQGAGLGLSRR341 pKa = 11.84QYY343 pKa = 11.25DD344 pKa = 3.34QVSFWFRR351 pKa = 11.84YY352 pKa = 8.16RR353 pKa = 11.84FKK355 pKa = 10.94FKK357 pKa = 10.99VSGDD361 pKa = 3.35SVYY364 pKa = 10.76RR365 pKa = 11.84RR366 pKa = 11.84LPAVSNTDD374 pKa = 4.09TIPEE378 pKa = 4.04APGAQNQVSPRR389 pKa = 11.84SILKK393 pKa = 10.04ARR395 pKa = 11.84PLDD398 pKa = 3.59TGDD401 pKa = 3.54ILEE404 pKa = 5.3GDD406 pKa = 4.12LQDD409 pKa = 3.62GCLTEE414 pKa = 3.98EE415 pKa = 4.06SLRR418 pKa = 11.84RR419 pKa = 11.84ITGSHH424 pKa = 6.24RR425 pKa = 11.84RR426 pKa = 11.84RR427 pKa = 11.84LPTKK431 pKa = 10.27LADD434 pKa = 3.41SSSRR438 pKa = 11.84RR439 pKa = 11.84VRR441 pKa = 11.84LFHH444 pKa = 7.55DD445 pKa = 3.58PGVRR449 pKa = 11.84KK450 pKa = 9.73RR451 pKa = 11.84RR452 pKa = 11.84IRR454 pKa = 11.84RR455 pKa = 11.84LLSGLLEE462 pKa = 4.23

Molecular weight: 54.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

714

98

462

238.0

27.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.742 ± 0.516

1.681 ± 0.672

5.602 ± 0.652

5.042 ± 1.666

3.501 ± 0.423

7.983 ± 2.126

3.501 ± 0.785

2.941 ± 0.534

5.182 ± 0.02

8.123 ± 1.732

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

0.56 ± 0.139

3.081 ± 0.466

6.723 ± 0.931

4.342 ± 0.09

8.543 ± 2.739

8.123 ± 1.665

7.283 ± 1.022

4.062 ± 0.971

3.081 ± 0.86

4.902 ± 1.093
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski