Streptococcus satellite phage Javan652

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.9

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 16 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZYG3|A0A4D5ZYG3_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan652 OX=2558807 GN=JavanS652_0013 PE=4 SV=1
MM1 pKa = 7.1TFKK4 pKa = 10.97LFSDD8 pKa = 3.63NAKK11 pKa = 10.57SFTFKK16 pKa = 10.81HH17 pKa = 6.35DD18 pKa = 3.64FEE20 pKa = 5.0TMDD23 pKa = 3.54HH24 pKa = 6.56AKK26 pKa = 10.34VSSTAILGYY35 pKa = 9.44MVGTYY40 pKa = 7.14EE41 pKa = 4.12QQPTEE46 pKa = 3.74ITIGGNEE53 pKa = 4.22ANNTFTMVVKK63 pKa = 10.59YY64 pKa = 10.86VEE66 pKa = 5.52DD67 pKa = 3.78EE68 pKa = 4.43DD69 pKa = 3.79LTKK72 pKa = 10.64VFNRR76 pKa = 11.84ICDD79 pKa = 3.6SFEE82 pKa = 4.4SYY84 pKa = 11.29SKK86 pKa = 11.06GCSEE90 pKa = 4.49AA91 pKa = 3.97

Molecular weight: 10.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZU46|A0A4D5ZU46_9VIRU PriCT_1 domain-containing protein OS=Streptococcus satellite phage Javan652 OX=2558807 GN=JavanS652_0011 PE=4 SV=1
MM1 pKa = 7.78KK2 pKa = 10.26INEE5 pKa = 4.22IKK7 pKa = 10.67KK8 pKa = 9.76KK9 pKa = 10.54DD10 pKa = 3.3GSTVYY15 pKa = 10.36RR16 pKa = 11.84ANIYY20 pKa = 10.62LGVDD24 pKa = 3.26VVTGKK29 pKa = 10.73KK30 pKa = 7.94VTTKK34 pKa = 9.32VTARR38 pKa = 11.84TKK40 pKa = 10.91KK41 pKa = 9.48EE42 pKa = 4.24LKK44 pKa = 9.67TKK46 pKa = 10.1AQQAQFDD53 pKa = 4.54FKK55 pKa = 11.59ANGSTRR61 pKa = 11.84YY62 pKa = 9.81KK63 pKa = 10.2EE64 pKa = 4.23VTIEE68 pKa = 4.09TYY70 pKa = 10.05EE71 pKa = 4.15ALATSWWDD79 pKa = 3.28NYY81 pKa = 10.78KK82 pKa = 9.05NTVKK86 pKa = 10.75VNTRR90 pKa = 11.84KK91 pKa = 9.31LQKK94 pKa = 10.61SILDD98 pKa = 3.51KK99 pKa = 11.1HH100 pKa = 6.49LLPLFGSFKK109 pKa = 10.45LDD111 pKa = 3.12KK112 pKa = 10.15LTTPLIQSIMNKK124 pKa = 9.56LANRR128 pKa = 11.84TNTGEE133 pKa = 3.92VGAYY137 pKa = 8.95LHH139 pKa = 6.49YY140 pKa = 11.1DD141 pKa = 3.92KK142 pKa = 11.05IHH144 pKa = 6.58ALNKK148 pKa = 10.18RR149 pKa = 11.84ILQYY153 pKa = 11.17GVVLQVIPTNPASNVVLPRR172 pKa = 11.84NTQKK176 pKa = 11.1DD177 pKa = 3.22KK178 pKa = 10.56KK179 pKa = 10.89AKK181 pKa = 9.81VKK183 pKa = 10.6HH184 pKa = 5.76FNNDD188 pKa = 2.8EE189 pKa = 4.08LKK191 pKa = 10.82QFLTYY196 pKa = 10.54LDD198 pKa = 4.21SLDD201 pKa = 3.38NTKK204 pKa = 10.86YY205 pKa = 8.96NTYY208 pKa = 10.95YY209 pKa = 10.97DD210 pKa = 3.1ITLYY214 pKa = 10.96KK215 pKa = 10.3FLLATGCRR223 pKa = 11.84INEE226 pKa = 4.0ALALSWSDD234 pKa = 2.86IDD236 pKa = 4.49LDD238 pKa = 3.79NSVVHH243 pKa = 5.55ITKK246 pKa = 9.15TLNCEE251 pKa = 3.99MKK253 pKa = 10.84LNSPKK258 pKa = 10.56SKK260 pKa = 10.47SSYY263 pKa = 10.18RR264 pKa = 11.84DD265 pKa = 2.8IDD267 pKa = 3.19IDD269 pKa = 3.79RR270 pKa = 11.84QTVTMLKK277 pKa = 10.06KK278 pKa = 9.84YY279 pKa = 8.29QRR281 pKa = 11.84KK282 pKa = 6.06QTQEE286 pKa = 3.04AWKK289 pKa = 10.12LGRR292 pKa = 11.84TEE294 pKa = 4.01TVVFSNFIKK303 pKa = 10.5AYY305 pKa = 9.64PRR307 pKa = 11.84INQLTKK313 pKa = 10.49RR314 pKa = 11.84LRR316 pKa = 11.84AHH318 pKa = 6.77FDD320 pKa = 2.99KK321 pKa = 11.39AGVNNIGFHH330 pKa = 5.79GFRR333 pKa = 11.84HH334 pKa = 4.87THH336 pKa = 6.58ASLLLNSGIPYY347 pKa = 10.0KK348 pKa = 10.34EE349 pKa = 3.8LQHH352 pKa = 6.88RR353 pKa = 11.84LGHH356 pKa = 6.17SKK358 pKa = 11.11LSMTMDD364 pKa = 4.19TYY366 pKa = 11.8SHH368 pKa = 7.15LSKK371 pKa = 11.01EE372 pKa = 4.3NAKK375 pKa = 10.32KK376 pKa = 9.29ATSFFEE382 pKa = 4.04QALKK386 pKa = 10.82SII388 pKa = 4.53

Molecular weight: 44.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16

0

16

2383

50

388

148.9

17.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.211 ± 0.468

0.504 ± 0.124

6.043 ± 0.485

7.679 ± 0.817

4.448 ± 0.489

4.574 ± 0.579

1.804 ± 0.302

7.176 ± 0.512

9.316 ± 0.711

9.232 ± 0.541

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.308 ± 0.337

5.959 ± 0.425

2.728 ± 0.575

4.029 ± 0.298

5.329 ± 0.641

5.875 ± 0.459

6.63 ± 0.729

5.12 ± 0.4

0.713 ± 0.166

4.322 ± 0.375
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski