Streptococcus satellite phage Javan634

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.81

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 23 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZTN8|A0A4D5ZTN8_9VIRU DNA primase OS=Streptococcus satellite phage Javan634 OX=2558797 GN=JavanS634_0013 PE=4 SV=1
MM1 pKa = 7.73EE2 pKa = 5.17YY3 pKa = 10.85EE4 pKa = 4.73LLLDD8 pKa = 5.21DD9 pKa = 5.46LLEE12 pKa = 4.43SLSALGVDD20 pKa = 3.59TSKK23 pKa = 11.49LNIVEE28 pKa = 4.06KK29 pKa = 10.06TDD31 pKa = 3.6YY32 pKa = 11.16VDD34 pKa = 3.41EE35 pKa = 4.38QEE37 pKa = 5.22FIIDD41 pKa = 3.62QRR43 pKa = 11.84ASKK46 pKa = 10.78YY47 pKa = 10.9SYY49 pKa = 9.1TQLKK53 pKa = 10.81AEE55 pKa = 4.62TNHH58 pKa = 5.57SWVSASFFII67 pKa = 5.56

Molecular weight: 7.75 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZY06|A0A4D5ZY06_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan634 OX=2558797 GN=JavanS634_0015 PE=4 SV=1
MM1 pKa = 7.53SGTVSISHH9 pKa = 6.57IAEE12 pKa = 4.11KK13 pKa = 10.77GRR15 pKa = 11.84ARR17 pKa = 11.84MIWNVKK23 pKa = 9.63EE24 pKa = 4.03KK25 pKa = 10.69DD26 pKa = 3.29RR27 pKa = 11.84RR28 pKa = 11.84PTFTQIKK35 pKa = 9.57EE36 pKa = 3.9RR37 pKa = 11.84QQQKK41 pKa = 10.36KK42 pKa = 9.91LKK44 pKa = 9.73KK45 pKa = 9.36KK46 pKa = 9.89RR47 pKa = 11.84NRR49 pKa = 11.84GKK51 pKa = 10.6

Molecular weight: 6.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

23

0

23

3419

51

494

148.7

17.33

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.592 ± 0.477

0.702 ± 0.176

6.464 ± 0.48

7.692 ± 0.594

3.802 ± 0.357

4.329 ± 0.418

2.252 ± 0.303

8.774 ± 0.639

9.33 ± 0.59

10.354 ± 0.583

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.194 ± 0.261

6.376 ± 0.474

3.364 ± 0.439

3.451 ± 0.407

5.089 ± 0.392

5.499 ± 0.435

5.937 ± 0.36

3.89 ± 0.416

1.053 ± 0.24

4.855 ± 0.378
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski