Kineococcus xinjiangensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Kineosporiales; Kineosporiaceae;

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4147 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2S6IDA5|A0A2S6IDA5_9ACTN Uncharacterized protein OS=Kineococcus xinjiangensis OX=512762 GN=CLV92_11664 PE=4 SV=1
MM1 pKa = 7.35SSDD4 pKa = 3.25VPAEE8 pKa = 3.69LRR10 pKa = 11.84YY11 pKa = 8.34TSEE14 pKa = 4.39HH15 pKa = 4.7EE16 pKa = 4.04WVRR19 pKa = 11.84VQEE22 pKa = 4.82DD23 pKa = 3.73GTLTVGITDD32 pKa = 3.84YY33 pKa = 11.23AQSALGDD40 pKa = 3.69VVYY43 pKa = 11.12VSLPAEE49 pKa = 4.61GEE51 pKa = 4.38TVAAGAACGEE61 pKa = 4.31VEE63 pKa = 4.33STKK66 pKa = 10.71SVSEE70 pKa = 3.59ITAPVAGTVLAHH82 pKa = 6.52NPGLEE87 pKa = 4.02TRR89 pKa = 11.84PDD91 pKa = 3.61LVNADD96 pKa = 3.97PYY98 pKa = 11.04GEE100 pKa = 3.73GWMFTLRR107 pKa = 11.84PDD109 pKa = 3.64DD110 pKa = 4.16ASAVEE115 pKa = 4.39GLLSAEE121 pKa = 5.4DD122 pKa = 3.95YY123 pKa = 7.86TAHH126 pKa = 7.29AGG128 pKa = 3.49

Molecular weight: 13.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2S6II57|A0A2S6II57_9ACTN Cell division protein CrgA OS=Kineococcus xinjiangensis OX=512762 GN=crgA PE=3 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84AKK15 pKa = 8.7THH17 pKa = 5.15GFRR20 pKa = 11.84LRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84AILSARR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 10.27GRR40 pKa = 11.84AEE42 pKa = 3.9LSAA45 pKa = 4.93

Molecular weight: 5.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4147

0

4147

1370737

29

3937

330.5

35.05

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.907 ± 0.065

0.749 ± 0.01

5.842 ± 0.032

5.715 ± 0.032

2.427 ± 0.02

9.619 ± 0.037

2.217 ± 0.02

2.415 ± 0.03

1.325 ± 0.023

10.767 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.483 ± 0.014

1.425 ± 0.021

6.275 ± 0.033

2.796 ± 0.023

8.555 ± 0.048

4.971 ± 0.025

5.714 ± 0.037

9.6 ± 0.038

1.534 ± 0.017

1.666 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski