Beihai narna-like virus 22
Average proteome isoelectric point is 8.74
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1L3KI08|A0A1L3KI08_9VIRU RNA-dependent RNA polymerase OS=Beihai narna-like virus 22 OX=1922450 PE=4 SV=1
MM1 pKa = 7.52 TNSCNNIPINMLLKK15 pKa = 10.35 EE16 pKa = 4.29 YY17 pKa = 9.98 NLQVGPCVSIFTKK30 pKa = 10.38 RR31 pKa = 11.84 VPIWWLKK38 pKa = 8.96 RR39 pKa = 11.84 SNIRR43 pKa = 11.84 FYY45 pKa = 10.82 HH46 pKa = 6.55 DD47 pKa = 3.25 KK48 pKa = 11.1 VPFIKK53 pKa = 10.54 NLQPDD58 pKa = 3.35 DD59 pKa = 3.65 RR60 pKa = 11.84 VRR62 pKa = 11.84 YY63 pKa = 8.91 LLSSIWTPRR72 pKa = 11.84 DD73 pKa = 3.2 RR74 pKa = 11.84 PLSFAFRR81 pKa = 11.84 AKK83 pKa = 10.45 LKK85 pKa = 10.19 EE86 pKa = 3.89 LSTKK90 pKa = 10.57 GSINTIEE97 pKa = 4.36 SWWNTVQGCCLPIMVGTNLWTDD119 pKa = 4.6 QIPNWCNRR127 pKa = 11.84 ITKK130 pKa = 8.58 WAFEE134 pKa = 4.31 SCSRR138 pKa = 11.84 NYY140 pKa = 11.18 SLFQSHH146 pKa = 6.0 IKK148 pKa = 10.59 AEE150 pKa = 4.15 RR151 pKa = 11.84 KK152 pKa = 9.72 LMRR155 pKa = 11.84 QYY157 pKa = 11.43 FMEE160 pKa = 4.4 TGISTLEE167 pKa = 4.28 GYY169 pKa = 10.04 KK170 pKa = 9.79 SSRR173 pKa = 11.84 RR174 pKa = 11.84 EE175 pKa = 3.54 VVTYY179 pKa = 9.72 VSVSQEE185 pKa = 3.7 VLRR188 pKa = 11.84 NLSTVRR194 pKa = 11.84 EE195 pKa = 4.05 RR196 pKa = 11.84 EE197 pKa = 4.04 VMIGLLTQTRR207 pKa = 11.84 ATGLADD213 pKa = 3.19 QRR215 pKa = 11.84 MINASLEE222 pKa = 4.1 KK223 pKa = 9.59 FLSVVSHH230 pKa = 6.65 PCAHH234 pKa = 6.27 ITLNQKK240 pKa = 9.85 VMDD243 pKa = 4.01 SMVPRR248 pKa = 11.84 ISGYY252 pKa = 10.05 IMGYY256 pKa = 7.89 TKK258 pKa = 10.77 LSSGPSAVFSHH269 pKa = 6.68 PRR271 pKa = 11.84 TRR273 pKa = 11.84 GGQTAAIAEE282 pKa = 4.43 LSQRR286 pKa = 11.84 YY287 pKa = 6.78 ITYY290 pKa = 10.28 SYY292 pKa = 11.14 DD293 pKa = 3.0 LHH295 pKa = 7.02 TLEE298 pKa = 4.42 KK299 pKa = 8.24 TTVEE303 pKa = 3.85 RR304 pKa = 11.84 TRR306 pKa = 11.84 IDD308 pKa = 3.33 NARR311 pKa = 11.84 KK312 pKa = 9.33 VLDD315 pKa = 3.82 YY316 pKa = 10.64 CIHH319 pKa = 6.43 RR320 pKa = 11.84 AIHH323 pKa = 6.42 RR324 pKa = 11.84 RR325 pKa = 11.84 TEE327 pKa = 3.92 VLKK330 pKa = 10.86 VRR332 pKa = 11.84 VSTVVEE338 pKa = 3.92 PGKK341 pKa = 10.83 ARR343 pKa = 11.84 VITVGTLEE351 pKa = 4.07 YY352 pKa = 10.82 VQILSVIAHH361 pKa = 6.84 IFKK364 pKa = 10.72 EE365 pKa = 4.44 SANSQRR371 pKa = 11.84 TRR373 pKa = 11.84 SGMKK377 pKa = 10.21 ASRR380 pKa = 11.84 HH381 pKa = 4.52 LWNFLWKK388 pKa = 10.61 DD389 pKa = 3.63 LDD391 pKa = 3.69 PRR393 pKa = 11.84 NSIWEE398 pKa = 4.45 TISGEE403 pKa = 3.87 GTIYY407 pKa = 10.93 GLSTDD412 pKa = 4.85 LEE414 pKa = 4.55 TATDD418 pKa = 3.99 YY419 pKa = 11.97 GNMSMSGQIWDD430 pKa = 4.89 LLIQAATRR438 pKa = 11.84 VPGVPIKK445 pKa = 10.47 LLHH448 pKa = 6.5 LGKK451 pKa = 10.19 EE452 pKa = 5.0 LYY454 pKa = 10.43 QSDD457 pKa = 4.24 RR458 pKa = 11.84 PLFSAGKK465 pKa = 10.2 LIATKK470 pKa = 10.44 KK471 pKa = 10.2 RR472 pKa = 11.84 GWLMGDD478 pKa = 3.77 PMTKK482 pKa = 9.37 ILFTLIQEE490 pKa = 4.46 VISRR494 pKa = 11.84 SVGRR498 pKa = 11.84 TYY500 pKa = 10.67 RR501 pKa = 11.84 IACSIVGDD509 pKa = 4.04 DD510 pKa = 4.11 LVVLSRR516 pKa = 11.84 EE517 pKa = 3.73 RR518 pKa = 11.84 SGLKK522 pKa = 9.87 EE523 pKa = 3.74 YY524 pKa = 10.98 LRR526 pKa = 11.84 LLEE529 pKa = 4.24 TLDD532 pKa = 5.75 LKK534 pKa = 10.99 ISWKK538 pKa = 8.69 DD539 pKa = 3.24 TCISDD544 pKa = 3.3 QYY546 pKa = 11.22 IYY548 pKa = 10.98 YY549 pKa = 10.18 CEE551 pKa = 3.86 EE552 pKa = 4.09 LARR555 pKa = 11.84 IPQSAGVSLRR565 pKa = 11.84 SLARR569 pKa = 11.84 KK570 pKa = 8.88 NKK572 pKa = 10.38 DD573 pKa = 3.26 YY574 pKa = 10.78 IGYY577 pKa = 9.62 IDD579 pKa = 4.0 VPKK582 pKa = 10.65 LRR584 pKa = 11.84 TLIPTRR590 pKa = 11.84 GEE592 pKa = 3.48 SDD594 pKa = 3.1 AFSNTNLGRR603 pKa = 11.84 FSLQGKK609 pKa = 8.36 SSEE612 pKa = 4.12 YY613 pKa = 8.75 TSRR616 pKa = 11.84 VNTGYY621 pKa = 11.09 YY622 pKa = 9.14 PVNEE626 pKa = 4.14 RR627 pKa = 11.84 ALLLQCMFIAEE638 pKa = 4.56 DD639 pKa = 3.83 TSCIHH644 pKa = 5.2 PHH646 pKa = 6.88 IPIEE650 pKa = 4.07 MGGGGSLVNDD660 pKa = 4.32 PFYY663 pKa = 10.65 VQRR666 pKa = 11.84 SISLCKK672 pKa = 8.67 YY673 pKa = 8.71 QRR675 pKa = 11.84 EE676 pKa = 3.57 ITYY679 pKa = 9.89 RR680 pKa = 11.84 IRR682 pKa = 11.84 SILSHH687 pKa = 6.41 NGWGFRR693 pKa = 11.84 FVHH696 pKa = 6.78 GDD698 pKa = 3.0 RR699 pKa = 11.84 PDD701 pKa = 3.65 RR702 pKa = 11.84 VTHH705 pKa = 6.35 KK706 pKa = 8.88 YY707 pKa = 10.29 HH708 pKa = 7.11 RR709 pKa = 11.84 FGKK712 pKa = 10.02 IIQDD716 pKa = 2.99 PRR718 pKa = 11.84 VFPEE722 pKa = 4.1 GCIIKK727 pKa = 9.76 PRR729 pKa = 11.84 NKK731 pKa = 10.17 AQSEE735 pKa = 4.17 LLASVRR741 pKa = 11.84 SSKK744 pKa = 10.39 IIPPVDD750 pKa = 2.65 AFMRR754 pKa = 11.84 LQRR757 pKa = 11.84 MYY759 pKa = 10.66 YY760 pKa = 10.05 FRR762 pKa = 11.84 GLFSGTGEE770 pKa = 4.08 VPDD773 pKa = 4.29 PDD775 pKa = 4.52 EE776 pKa = 4.12 YY777 pKa = 11.43 LKK779 pKa = 11.08 SLEE782 pKa = 4.26 IPDD785 pKa = 5.78 GITKK789 pKa = 10.26 PSIGYY794 pKa = 7.22 TKK796 pKa = 10.75 LNPLTLDD803 pKa = 3.42 EE804 pKa = 4.62 VSTFLSLWVKK814 pKa = 10.54 RR815 pKa = 11.84 GLAFRR820 pKa = 11.84 DD821 pKa = 5.27 DD822 pKa = 3.3 IPFWINRR829 pKa = 11.84 EE830 pKa = 3.94 KK831 pKa = 11.17 LDD833 pKa = 3.54 INHH836 pKa = 7.22 PLVIEE841 pKa = 4.42 LFKK844 pKa = 11.17 KK845 pKa = 10.31 PDD847 pKa = 3.78 MPWTTEE853 pKa = 3.74 DD854 pKa = 4.71 LIEE857 pKa = 4.29 EE858 pKa = 4.31 SEE860 pKa = 4.24 KK861 pKa = 11.07 LSLRR865 pKa = 11.84 LAEE868 pKa = 4.74 NPWEE872 pKa = 4.41 IPDD875 pKa = 4.0 TLTPALSLVLDD886 pKa = 3.69 QDD888 pKa = 4.58 AILINILEE896 pKa = 4.18 RR897 pKa = 11.84 KK898 pKa = 8.29 IKK900 pKa = 10.4 KK901 pKa = 7.4 ITNIGRR907 pKa = 11.84 LVVVTLDD914 pKa = 3.24 VRR916 pKa = 11.84 LLIRR920 pKa = 11.84 MNRR923 pKa = 11.84 ILRR926 pKa = 11.84 KK927 pKa = 9.52 RR928 pKa = 11.84 GKK930 pKa = 9.96 SLDD933 pKa = 4.03 RR934 pKa = 11.84 IILIDD939 pKa = 3.98 PFLNLLGMAPDD950 pKa = 4.66 FNPDD954 pKa = 3.34 IYY956 pKa = 11.33 LEE958 pKa = 4.34 DD959 pKa = 3.45 QGGITYY965 pKa = 10.1 VEE967 pKa = 4.15 DD968 pKa = 3.87 MYY970 pKa = 11.22 FQDD973 pKa = 4.13 GMPVPEE979 pKa = 4.5 VEE981 pKa = 4.0 EE982 pKa = 4.94 HH983 pKa = 5.94 MFSDD987 pKa = 3.94 PVYY990 pKa = 10.79 FKK992 pKa = 10.91 LCKK995 pKa = 9.18 PDD997 pKa = 3.49 LPIYY1001 pKa = 9.87 IAASVIHH1008 pKa = 6.14 TKK1010 pKa = 10.44 RR1011 pKa = 11.84 FPSPKK1016 pKa = 9.7 YY1017 pKa = 9.28 RR1018 pKa = 11.84 ACGANLLMSS1027 pKa = 4.69
Molecular weight: 117.82 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.743
IPC2_protein 8.668
IPC_protein 8.565
Toseland 9.107
ProMoST 9.048
Dawson 9.472
Bjellqvist 9.326
Wikipedia 9.663
Rodwell 9.633
Grimsley 9.545
Solomon 9.502
Lehninger 9.443
Nozaki 9.399
DTASelect 9.238
Thurlkill 9.326
EMBOSS 9.604
Sillero 9.487
Patrickios 4.66
IPC_peptide 9.487
IPC2_peptide 8.083
IPC2.peptide.svr19 7.734
Protein with the highest isoelectric point:
>tr|A0A1L3KI08|A0A1L3KI08_9VIRU RNA-dependent RNA polymerase OS=Beihai narna-like virus 22 OX=1922450 PE=4 SV=1
MM1 pKa = 7.52 TNSCNNIPINMLLKK15 pKa = 10.35 EE16 pKa = 4.29 YY17 pKa = 9.98 NLQVGPCVSIFTKK30 pKa = 10.38 RR31 pKa = 11.84 VPIWWLKK38 pKa = 8.96 RR39 pKa = 11.84 SNIRR43 pKa = 11.84 FYY45 pKa = 10.82 HH46 pKa = 6.55 DD47 pKa = 3.25 KK48 pKa = 11.1 VPFIKK53 pKa = 10.54 NLQPDD58 pKa = 3.35 DD59 pKa = 3.65 RR60 pKa = 11.84 VRR62 pKa = 11.84 YY63 pKa = 8.91 LLSSIWTPRR72 pKa = 11.84 DD73 pKa = 3.2 RR74 pKa = 11.84 PLSFAFRR81 pKa = 11.84 AKK83 pKa = 10.45 LKK85 pKa = 10.19 EE86 pKa = 3.89 LSTKK90 pKa = 10.57 GSINTIEE97 pKa = 4.36 SWWNTVQGCCLPIMVGTNLWTDD119 pKa = 4.6 QIPNWCNRR127 pKa = 11.84 ITKK130 pKa = 8.58 WAFEE134 pKa = 4.31 SCSRR138 pKa = 11.84 NYY140 pKa = 11.18 SLFQSHH146 pKa = 6.0 IKK148 pKa = 10.59 AEE150 pKa = 4.15 RR151 pKa = 11.84 KK152 pKa = 9.72 LMRR155 pKa = 11.84 QYY157 pKa = 11.43 FMEE160 pKa = 4.4 TGISTLEE167 pKa = 4.28 GYY169 pKa = 10.04 KK170 pKa = 9.79 SSRR173 pKa = 11.84 RR174 pKa = 11.84 EE175 pKa = 3.54 VVTYY179 pKa = 9.72 VSVSQEE185 pKa = 3.7 VLRR188 pKa = 11.84 NLSTVRR194 pKa = 11.84 EE195 pKa = 4.05 RR196 pKa = 11.84 EE197 pKa = 4.04 VMIGLLTQTRR207 pKa = 11.84 ATGLADD213 pKa = 3.19 QRR215 pKa = 11.84 MINASLEE222 pKa = 4.1 KK223 pKa = 9.59 FLSVVSHH230 pKa = 6.65 PCAHH234 pKa = 6.27 ITLNQKK240 pKa = 9.85 VMDD243 pKa = 4.01 SMVPRR248 pKa = 11.84 ISGYY252 pKa = 10.05 IMGYY256 pKa = 7.89 TKK258 pKa = 10.77 LSSGPSAVFSHH269 pKa = 6.68 PRR271 pKa = 11.84 TRR273 pKa = 11.84 GGQTAAIAEE282 pKa = 4.43 LSQRR286 pKa = 11.84 YY287 pKa = 6.78 ITYY290 pKa = 10.28 SYY292 pKa = 11.14 DD293 pKa = 3.0 LHH295 pKa = 7.02 TLEE298 pKa = 4.42 KK299 pKa = 8.24 TTVEE303 pKa = 3.85 RR304 pKa = 11.84 TRR306 pKa = 11.84 IDD308 pKa = 3.33 NARR311 pKa = 11.84 KK312 pKa = 9.33 VLDD315 pKa = 3.82 YY316 pKa = 10.64 CIHH319 pKa = 6.43 RR320 pKa = 11.84 AIHH323 pKa = 6.42 RR324 pKa = 11.84 RR325 pKa = 11.84 TEE327 pKa = 3.92 VLKK330 pKa = 10.86 VRR332 pKa = 11.84 VSTVVEE338 pKa = 3.92 PGKK341 pKa = 10.83 ARR343 pKa = 11.84 VITVGTLEE351 pKa = 4.07 YY352 pKa = 10.82 VQILSVIAHH361 pKa = 6.84 IFKK364 pKa = 10.72 EE365 pKa = 4.44 SANSQRR371 pKa = 11.84 TRR373 pKa = 11.84 SGMKK377 pKa = 10.21 ASRR380 pKa = 11.84 HH381 pKa = 4.52 LWNFLWKK388 pKa = 10.61 DD389 pKa = 3.63 LDD391 pKa = 3.69 PRR393 pKa = 11.84 NSIWEE398 pKa = 4.45 TISGEE403 pKa = 3.87 GTIYY407 pKa = 10.93 GLSTDD412 pKa = 4.85 LEE414 pKa = 4.55 TATDD418 pKa = 3.99 YY419 pKa = 11.97 GNMSMSGQIWDD430 pKa = 4.89 LLIQAATRR438 pKa = 11.84 VPGVPIKK445 pKa = 10.47 LLHH448 pKa = 6.5 LGKK451 pKa = 10.19 EE452 pKa = 5.0 LYY454 pKa = 10.43 QSDD457 pKa = 4.24 RR458 pKa = 11.84 PLFSAGKK465 pKa = 10.2 LIATKK470 pKa = 10.44 KK471 pKa = 10.2 RR472 pKa = 11.84 GWLMGDD478 pKa = 3.77 PMTKK482 pKa = 9.37 ILFTLIQEE490 pKa = 4.46 VISRR494 pKa = 11.84 SVGRR498 pKa = 11.84 TYY500 pKa = 10.67 RR501 pKa = 11.84 IACSIVGDD509 pKa = 4.04 DD510 pKa = 4.11 LVVLSRR516 pKa = 11.84 EE517 pKa = 3.73 RR518 pKa = 11.84 SGLKK522 pKa = 9.87 EE523 pKa = 3.74 YY524 pKa = 10.98 LRR526 pKa = 11.84 LLEE529 pKa = 4.24 TLDD532 pKa = 5.75 LKK534 pKa = 10.99 ISWKK538 pKa = 8.69 DD539 pKa = 3.24 TCISDD544 pKa = 3.3 QYY546 pKa = 11.22 IYY548 pKa = 10.98 YY549 pKa = 10.18 CEE551 pKa = 3.86 EE552 pKa = 4.09 LARR555 pKa = 11.84 IPQSAGVSLRR565 pKa = 11.84 SLARR569 pKa = 11.84 KK570 pKa = 8.88 NKK572 pKa = 10.38 DD573 pKa = 3.26 YY574 pKa = 10.78 IGYY577 pKa = 9.62 IDD579 pKa = 4.0 VPKK582 pKa = 10.65 LRR584 pKa = 11.84 TLIPTRR590 pKa = 11.84 GEE592 pKa = 3.48 SDD594 pKa = 3.1 AFSNTNLGRR603 pKa = 11.84 FSLQGKK609 pKa = 8.36 SSEE612 pKa = 4.12 YY613 pKa = 8.75 TSRR616 pKa = 11.84 VNTGYY621 pKa = 11.09 YY622 pKa = 9.14 PVNEE626 pKa = 4.14 RR627 pKa = 11.84 ALLLQCMFIAEE638 pKa = 4.56 DD639 pKa = 3.83 TSCIHH644 pKa = 5.2 PHH646 pKa = 6.88 IPIEE650 pKa = 4.07 MGGGGSLVNDD660 pKa = 4.32 PFYY663 pKa = 10.65 VQRR666 pKa = 11.84 SISLCKK672 pKa = 8.67 YY673 pKa = 8.71 QRR675 pKa = 11.84 EE676 pKa = 3.57 ITYY679 pKa = 9.89 RR680 pKa = 11.84 IRR682 pKa = 11.84 SILSHH687 pKa = 6.41 NGWGFRR693 pKa = 11.84 FVHH696 pKa = 6.78 GDD698 pKa = 3.0 RR699 pKa = 11.84 PDD701 pKa = 3.65 RR702 pKa = 11.84 VTHH705 pKa = 6.35 KK706 pKa = 8.88 YY707 pKa = 10.29 HH708 pKa = 7.11 RR709 pKa = 11.84 FGKK712 pKa = 10.02 IIQDD716 pKa = 2.99 PRR718 pKa = 11.84 VFPEE722 pKa = 4.1 GCIIKK727 pKa = 9.76 PRR729 pKa = 11.84 NKK731 pKa = 10.17 AQSEE735 pKa = 4.17 LLASVRR741 pKa = 11.84 SSKK744 pKa = 10.39 IIPPVDD750 pKa = 2.65 AFMRR754 pKa = 11.84 LQRR757 pKa = 11.84 MYY759 pKa = 10.66 YY760 pKa = 10.05 FRR762 pKa = 11.84 GLFSGTGEE770 pKa = 4.08 VPDD773 pKa = 4.29 PDD775 pKa = 4.52 EE776 pKa = 4.12 YY777 pKa = 11.43 LKK779 pKa = 11.08 SLEE782 pKa = 4.26 IPDD785 pKa = 5.78 GITKK789 pKa = 10.26 PSIGYY794 pKa = 7.22 TKK796 pKa = 10.75 LNPLTLDD803 pKa = 3.42 EE804 pKa = 4.62 VSTFLSLWVKK814 pKa = 10.54 RR815 pKa = 11.84 GLAFRR820 pKa = 11.84 DD821 pKa = 5.27 DD822 pKa = 3.3 IPFWINRR829 pKa = 11.84 EE830 pKa = 3.94 KK831 pKa = 11.17 LDD833 pKa = 3.54 INHH836 pKa = 7.22 PLVIEE841 pKa = 4.42 LFKK844 pKa = 11.17 KK845 pKa = 10.31 PDD847 pKa = 3.78 MPWTTEE853 pKa = 3.74 DD854 pKa = 4.71 LIEE857 pKa = 4.29 EE858 pKa = 4.31 SEE860 pKa = 4.24 KK861 pKa = 11.07 LSLRR865 pKa = 11.84 LAEE868 pKa = 4.74 NPWEE872 pKa = 4.41 IPDD875 pKa = 4.0 TLTPALSLVLDD886 pKa = 3.69 QDD888 pKa = 4.58 AILINILEE896 pKa = 4.18 RR897 pKa = 11.84 KK898 pKa = 8.29 IKK900 pKa = 10.4 KK901 pKa = 7.4 ITNIGRR907 pKa = 11.84 LVVVTLDD914 pKa = 3.24 VRR916 pKa = 11.84 LLIRR920 pKa = 11.84 MNRR923 pKa = 11.84 ILRR926 pKa = 11.84 KK927 pKa = 9.52 RR928 pKa = 11.84 GKK930 pKa = 9.96 SLDD933 pKa = 4.03 RR934 pKa = 11.84 IILIDD939 pKa = 3.98 PFLNLLGMAPDD950 pKa = 4.66 FNPDD954 pKa = 3.34 IYY956 pKa = 11.33 LEE958 pKa = 4.34 DD959 pKa = 3.45 QGGITYY965 pKa = 10.1 VEE967 pKa = 4.15 DD968 pKa = 3.87 MYY970 pKa = 11.22 FQDD973 pKa = 4.13 GMPVPEE979 pKa = 4.5 VEE981 pKa = 4.0 EE982 pKa = 4.94 HH983 pKa = 5.94 MFSDD987 pKa = 3.94 PVYY990 pKa = 10.79 FKK992 pKa = 10.91 LCKK995 pKa = 9.18 PDD997 pKa = 3.49 LPIYY1001 pKa = 9.87 IAASVIHH1008 pKa = 6.14 TKK1010 pKa = 10.44 RR1011 pKa = 11.84 FPSPKK1016 pKa = 9.7 YY1017 pKa = 9.28 RR1018 pKa = 11.84 ACGANLLMSS1027 pKa = 4.69
Molecular weight: 117.82 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.743
IPC2_protein 8.668
IPC_protein 8.565
Toseland 9.107
ProMoST 9.048
Dawson 9.472
Bjellqvist 9.326
Wikipedia 9.663
Rodwell 9.633
Grimsley 9.545
Solomon 9.502
Lehninger 9.443
Nozaki 9.399
DTASelect 9.238
Thurlkill 9.326
EMBOSS 9.604
Sillero 9.487
Patrickios 4.66
IPC_peptide 9.487
IPC2_peptide 8.083
IPC2.peptide.svr19 7.734
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
1
0
1
1027
1027
1027
1027.0
117.82
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
4.09 ± 0.0
1.655 ± 0.0
5.161 ± 0.0
5.355 ± 0.0
3.408 ± 0.0
5.55 ± 0.0
1.947 ± 0.0
8.374 ± 0.0
5.648 ± 0.0
10.516 ± 0.0
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.532 ± 0.0
3.797 ± 0.0
5.258 ± 0.0
2.921 ± 0.0
7.79 ± 0.0
7.984 ± 0.0
6.134 ± 0.0
6.037 ± 0.0
1.85 ± 0.0
3.992 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here