Penicillium aurantiogriseum partiti-like virus
Average proteome isoelectric point is 6.95
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A0S2KPA7|A0A0S2KPA7_9VIRU 66 kDa protein OS=Penicillium aurantiogriseum partiti-like virus OX=1755781 PE=4 SV=1
MM1 pKa = 7.38 SRR3 pKa = 11.84 LRR5 pKa = 11.84 FLRR8 pKa = 11.84 KK9 pKa = 9.38 VSRR12 pKa = 11.84 FPARR16 pKa = 11.84 NEE18 pKa = 4.01 THH20 pKa = 6.83 FDD22 pKa = 3.9 PYY24 pKa = 10.5 VHH26 pKa = 6.96 AALNAVSGPNVKK38 pKa = 10.12 EE39 pKa = 3.92 YY40 pKa = 11.29 VSTIQSEE47 pKa = 4.0 WHH49 pKa = 6.5 RR50 pKa = 11.84 PSGDD54 pKa = 3.32 NAILEE59 pKa = 4.85 DD60 pKa = 3.67 NLMDD64 pKa = 4.59 YY65 pKa = 11.63 GDD67 pKa = 3.85 ILPRR71 pKa = 11.84 RR72 pKa = 11.84 SFDD75 pKa = 3.28 GAYY78 pKa = 10.51 LAILKK83 pKa = 8.14 KK84 pKa = 9.24 TLDD87 pKa = 3.75 EE88 pKa = 4.83 LKK90 pKa = 9.78 PAEE93 pKa = 4.63 PIIPLTLGAAEE104 pKa = 4.22 KK105 pKa = 9.94 HH106 pKa = 5.71 PRR108 pKa = 11.84 MPSSTSPGFPWTTKK122 pKa = 9.81 GYY124 pKa = 7.25 RR125 pKa = 11.84 TKK127 pKa = 10.83 RR128 pKa = 11.84 DD129 pKa = 3.29 VFEE132 pKa = 5.52 DD133 pKa = 3.57 KK134 pKa = 10.84 SATGMIHH141 pKa = 6.98 RR142 pKa = 11.84 AWDD145 pKa = 3.61 SIGRR149 pKa = 11.84 GIAWQLPDD157 pKa = 3.7 CLGFHH162 pKa = 6.14 RR163 pKa = 11.84 TVASVKK169 pKa = 9.1 EE170 pKa = 3.98 KK171 pKa = 11.16 SKK173 pKa = 10.46 IRR175 pKa = 11.84 PVWGFPTDD183 pKa = 3.8 VIVEE187 pKa = 4.03 EE188 pKa = 3.99 ARR190 pKa = 11.84 YY191 pKa = 8.39 FFPLWEE197 pKa = 4.02 EE198 pKa = 3.71 LKK200 pKa = 10.93 LINNEE205 pKa = 3.39 RR206 pKa = 11.84 DD207 pKa = 3.32 TFYY210 pKa = 10.4 GTGMEE215 pKa = 4.36 TMLSGHH221 pKa = 5.44 QHH223 pKa = 6.6 LARR226 pKa = 11.84 NFDD229 pKa = 3.93 TPSVKK234 pKa = 10.38 YY235 pKa = 10.35 VLNSDD240 pKa = 4.23 LSRR243 pKa = 11.84 FDD245 pKa = 3.32 AHH247 pKa = 6.32 VPSWVIRR254 pKa = 11.84 DD255 pKa = 3.78 VFSHH259 pKa = 6.15 ISSWFDD265 pKa = 2.99 FSRR268 pKa = 11.84 VRR270 pKa = 11.84 DD271 pKa = 3.85 SEE273 pKa = 4.37 GKK275 pKa = 9.04 IWNCNTQQTCRR286 pKa = 11.84 RR287 pKa = 11.84 WKK289 pKa = 10.8 AMVSYY294 pKa = 9.34 FINTKK299 pKa = 9.4 VRR301 pKa = 11.84 MPSGLRR307 pKa = 11.84 FQKK310 pKa = 10.67 SQGVPSGSMFTNLIDD325 pKa = 3.51 TCVNAVQFRR334 pKa = 11.84 TALYY338 pKa = 9.03 HH339 pKa = 7.31 AYY341 pKa = 10.41 GEE343 pKa = 4.56 LPIKK347 pKa = 10.35 DD348 pKa = 4.28 YY349 pKa = 11.54 YY350 pKa = 11.22 YY351 pKa = 11.52 GDD353 pKa = 4.25 DD354 pKa = 3.27 SCIFLRR360 pKa = 11.84 EE361 pKa = 4.07 IPDD364 pKa = 3.62 LEE366 pKa = 6.39 AIAKK370 pKa = 9.59 VLLRR374 pKa = 11.84 QFGAEE379 pKa = 4.04 LNVDD383 pKa = 3.49 KK384 pKa = 10.78 TILSDD389 pKa = 3.98 NPDD392 pKa = 3.9 NIHH395 pKa = 6.08 WLGYY399 pKa = 7.87 YY400 pKa = 9.7 YY401 pKa = 10.79 RR402 pKa = 11.84 STGPRR407 pKa = 11.84 RR408 pKa = 11.84 SLDD411 pKa = 3.76 FIIASSLYY419 pKa = 8.25 PDD421 pKa = 4.46 RR422 pKa = 11.84 EE423 pKa = 4.14 IEE425 pKa = 4.44 SPLDD429 pKa = 3.22 SAARR433 pKa = 11.84 LLGQLYY439 pKa = 10.48 SCMDD443 pKa = 3.84 PKK445 pKa = 11.15 VAVTFYY451 pKa = 11.5 DD452 pKa = 4.38 CITWLQCTFNITTSDD467 pKa = 3.57 LNSYY471 pKa = 8.89 VASLPSKK478 pKa = 10.23 AMKK481 pKa = 10.18 YY482 pKa = 10.67 LNTLGLEE489 pKa = 4.13 TSEE492 pKa = 4.62 ISLPRR497 pKa = 11.84 CAADD501 pKa = 3.44 PFGGRR506 pKa = 11.84 YY507 pKa = 9.25 IPDD510 pKa = 4.84 LLPHH514 pKa = 6.07 PCARR518 pKa = 11.84 NFFRR522 pKa = 11.84 FRR524 pKa = 11.84 DD525 pKa = 3.33 RR526 pKa = 11.84 HH527 pKa = 5.11 LPRR530 pKa = 11.84 FAFCAEE536 pKa = 4.52 AYY538 pKa = 9.65 QNRR541 pKa = 11.84 SLRR544 pKa = 11.84 QRR546 pKa = 11.84 IFKK549 pKa = 10.77 DD550 pKa = 2.92 LDD552 pKa = 3.61 KK553 pKa = 11.49 YY554 pKa = 11.43 SSTFNQHH561 pKa = 5.62 FDD563 pKa = 3.49 YY564 pKa = 11.31 DD565 pKa = 3.66 LDD567 pKa = 3.72 AQYY570 pKa = 8.65 FTDD573 pKa = 3.51
Molecular weight: 66.07 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.954
IPC2_protein 7.263
IPC_protein 7.161
Toseland 6.942
ProMoST 7.644
Dawson 7.819
Bjellqvist 8.17
Wikipedia 7.746
Rodwell 7.834
Grimsley 7.029
Solomon 7.863
Lehninger 7.892
Nozaki 8.331
DTASelect 7.98
Thurlkill 8.009
EMBOSS 8.053
Sillero 8.317
Patrickios 4.177
IPC_peptide 7.863
IPC2_peptide 7.395
IPC2.peptide.svr19 7.318
Protein with the highest isoelectric point:
>tr|A0A0S2KPA7|A0A0S2KPA7_9VIRU 66 kDa protein OS=Penicillium aurantiogriseum partiti-like virus OX=1755781 PE=4 SV=1
MM1 pKa = 7.38 SRR3 pKa = 11.84 LRR5 pKa = 11.84 FLRR8 pKa = 11.84 KK9 pKa = 9.38 VSRR12 pKa = 11.84 FPARR16 pKa = 11.84 NEE18 pKa = 4.01 THH20 pKa = 6.83 FDD22 pKa = 3.9 PYY24 pKa = 10.5 VHH26 pKa = 6.96 AALNAVSGPNVKK38 pKa = 10.12 EE39 pKa = 3.92 YY40 pKa = 11.29 VSTIQSEE47 pKa = 4.0 WHH49 pKa = 6.5 RR50 pKa = 11.84 PSGDD54 pKa = 3.32 NAILEE59 pKa = 4.85 DD60 pKa = 3.67 NLMDD64 pKa = 4.59 YY65 pKa = 11.63 GDD67 pKa = 3.85 ILPRR71 pKa = 11.84 RR72 pKa = 11.84 SFDD75 pKa = 3.28 GAYY78 pKa = 10.51 LAILKK83 pKa = 8.14 KK84 pKa = 9.24 TLDD87 pKa = 3.75 EE88 pKa = 4.83 LKK90 pKa = 9.78 PAEE93 pKa = 4.63 PIIPLTLGAAEE104 pKa = 4.22 KK105 pKa = 9.94 HH106 pKa = 5.71 PRR108 pKa = 11.84 MPSSTSPGFPWTTKK122 pKa = 9.81 GYY124 pKa = 7.25 RR125 pKa = 11.84 TKK127 pKa = 10.83 RR128 pKa = 11.84 DD129 pKa = 3.29 VFEE132 pKa = 5.52 DD133 pKa = 3.57 KK134 pKa = 10.84 SATGMIHH141 pKa = 6.98 RR142 pKa = 11.84 AWDD145 pKa = 3.61 SIGRR149 pKa = 11.84 GIAWQLPDD157 pKa = 3.7 CLGFHH162 pKa = 6.14 RR163 pKa = 11.84 TVASVKK169 pKa = 9.1 EE170 pKa = 3.98 KK171 pKa = 11.16 SKK173 pKa = 10.46 IRR175 pKa = 11.84 PVWGFPTDD183 pKa = 3.8 VIVEE187 pKa = 4.03 EE188 pKa = 3.99 ARR190 pKa = 11.84 YY191 pKa = 8.39 FFPLWEE197 pKa = 4.02 EE198 pKa = 3.71 LKK200 pKa = 10.93 LINNEE205 pKa = 3.39 RR206 pKa = 11.84 DD207 pKa = 3.32 TFYY210 pKa = 10.4 GTGMEE215 pKa = 4.36 TMLSGHH221 pKa = 5.44 QHH223 pKa = 6.6 LARR226 pKa = 11.84 NFDD229 pKa = 3.93 TPSVKK234 pKa = 10.38 YY235 pKa = 10.35 VLNSDD240 pKa = 4.23 LSRR243 pKa = 11.84 FDD245 pKa = 3.32 AHH247 pKa = 6.32 VPSWVIRR254 pKa = 11.84 DD255 pKa = 3.78 VFSHH259 pKa = 6.15 ISSWFDD265 pKa = 2.99 FSRR268 pKa = 11.84 VRR270 pKa = 11.84 DD271 pKa = 3.85 SEE273 pKa = 4.37 GKK275 pKa = 9.04 IWNCNTQQTCRR286 pKa = 11.84 RR287 pKa = 11.84 WKK289 pKa = 10.8 AMVSYY294 pKa = 9.34 FINTKK299 pKa = 9.4 VRR301 pKa = 11.84 MPSGLRR307 pKa = 11.84 FQKK310 pKa = 10.67 SQGVPSGSMFTNLIDD325 pKa = 3.51 TCVNAVQFRR334 pKa = 11.84 TALYY338 pKa = 9.03 HH339 pKa = 7.31 AYY341 pKa = 10.41 GEE343 pKa = 4.56 LPIKK347 pKa = 10.35 DD348 pKa = 4.28 YY349 pKa = 11.54 YY350 pKa = 11.22 YY351 pKa = 11.52 GDD353 pKa = 4.25 DD354 pKa = 3.27 SCIFLRR360 pKa = 11.84 EE361 pKa = 4.07 IPDD364 pKa = 3.62 LEE366 pKa = 6.39 AIAKK370 pKa = 9.59 VLLRR374 pKa = 11.84 QFGAEE379 pKa = 4.04 LNVDD383 pKa = 3.49 KK384 pKa = 10.78 TILSDD389 pKa = 3.98 NPDD392 pKa = 3.9 NIHH395 pKa = 6.08 WLGYY399 pKa = 7.87 YY400 pKa = 9.7 YY401 pKa = 10.79 RR402 pKa = 11.84 STGPRR407 pKa = 11.84 RR408 pKa = 11.84 SLDD411 pKa = 3.76 FIIASSLYY419 pKa = 8.25 PDD421 pKa = 4.46 RR422 pKa = 11.84 EE423 pKa = 4.14 IEE425 pKa = 4.44 SPLDD429 pKa = 3.22 SAARR433 pKa = 11.84 LLGQLYY439 pKa = 10.48 SCMDD443 pKa = 3.84 PKK445 pKa = 11.15 VAVTFYY451 pKa = 11.5 DD452 pKa = 4.38 CITWLQCTFNITTSDD467 pKa = 3.57 LNSYY471 pKa = 8.89 VASLPSKK478 pKa = 10.23 AMKK481 pKa = 10.18 YY482 pKa = 10.67 LNTLGLEE489 pKa = 4.13 TSEE492 pKa = 4.62 ISLPRR497 pKa = 11.84 CAADD501 pKa = 3.44 PFGGRR506 pKa = 11.84 YY507 pKa = 9.25 IPDD510 pKa = 4.84 LLPHH514 pKa = 6.07 PCARR518 pKa = 11.84 NFFRR522 pKa = 11.84 FRR524 pKa = 11.84 DD525 pKa = 3.33 RR526 pKa = 11.84 HH527 pKa = 5.11 LPRR530 pKa = 11.84 FAFCAEE536 pKa = 4.52 AYY538 pKa = 9.65 QNRR541 pKa = 11.84 SLRR544 pKa = 11.84 QRR546 pKa = 11.84 IFKK549 pKa = 10.77 DD550 pKa = 2.92 LDD552 pKa = 3.61 KK553 pKa = 11.49 YY554 pKa = 11.43 SSTFNQHH561 pKa = 5.62 FDD563 pKa = 3.49 YY564 pKa = 11.31 DD565 pKa = 3.66 LDD567 pKa = 3.72 AQYY570 pKa = 8.65 FTDD573 pKa = 3.51
Molecular weight: 66.07 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.954
IPC2_protein 7.263
IPC_protein 7.161
Toseland 6.942
ProMoST 7.644
Dawson 7.819
Bjellqvist 8.17
Wikipedia 7.746
Rodwell 7.834
Grimsley 7.029
Solomon 7.863
Lehninger 7.892
Nozaki 8.331
DTASelect 7.98
Thurlkill 8.009
EMBOSS 8.053
Sillero 8.317
Patrickios 4.177
IPC_peptide 7.863
IPC2_peptide 7.395
IPC2.peptide.svr19 7.318
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
1
0
1
573
573
573
573.0
66.07
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.457 ± 0.0
1.92 ± 0.0
7.33 ± 0.0
4.363 ± 0.0
6.108 ± 0.0
4.887 ± 0.0
2.618 ± 0.0
5.41 ± 0.0
4.538 ± 0.0
8.901 ± 0.0
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.92 ± 0.0
4.014 ± 0.0
5.934 ± 0.0
2.618 ± 0.0
7.679 ± 0.0
8.202 ± 0.0
5.585 ± 0.0
4.712 ± 0.0
2.094 ± 0.0
4.712 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here