Betapapillomavirus 5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Betapapillomavirus

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2D2AL34|A0A2D2AL34_9PAPI Regulatory protein E2 OS=Betapapillomavirus 5 OX=334209 GN=E2 PE=3 SV=1
MM1 pKa = 7.43IGKK4 pKa = 8.97EE5 pKa = 3.79VTIPDD10 pKa = 4.17IEE12 pKa = 5.64LEE14 pKa = 4.19LQDD17 pKa = 4.42LVQPIDD23 pKa = 3.48LHH25 pKa = 7.78CDD27 pKa = 2.97EE28 pKa = 5.09VLPEE32 pKa = 3.94EE33 pKa = 4.52SEE35 pKa = 4.24NLSEE39 pKa = 4.18SSQAEE44 pKa = 4.21VEE46 pKa = 4.15PEE48 pKa = 3.96RR49 pKa = 11.84ILFKK53 pKa = 10.62IVAPCGGCEE62 pKa = 3.8TRR64 pKa = 11.84LKK66 pKa = 10.39IHH68 pKa = 6.63IASTRR73 pKa = 11.84FGIRR77 pKa = 11.84CLEE80 pKa = 3.87EE81 pKa = 4.56LLLSEE86 pKa = 5.47LCLLCPVCRR95 pKa = 11.84NGRR98 pKa = 11.84QQ99 pKa = 3.02

Molecular weight: 11.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2D2AL37|A0A2D2AL37_9PAPI Minor capsid protein L2 OS=Betapapillomavirus 5 OX=334209 GN=L2 PE=3 SV=1
MM1 pKa = 7.45EE2 pKa = 5.84ALNQRR7 pKa = 11.84FNVLQDD13 pKa = 3.4QLMDD17 pKa = 3.31IYY19 pKa = 11.21EE20 pKa = 4.53RR21 pKa = 11.84GSDD24 pKa = 3.43TLEE27 pKa = 3.75EE28 pKa = 4.33QIKK31 pKa = 9.81HH32 pKa = 3.94WTLLKK37 pKa = 10.1QEE39 pKa = 4.31QIILHH44 pKa = 4.89YY45 pKa = 10.14ARR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84GIMRR53 pKa = 11.84LGYY56 pKa = 10.55HH57 pKa = 6.55PVPTLAVSEE66 pKa = 4.87LKK68 pKa = 10.95AKK70 pKa = 10.45DD71 pKa = 3.73AIAMVLHH78 pKa = 6.57LEE80 pKa = 4.13NLKK83 pKa = 10.32QSPYY87 pKa = 10.46KK88 pKa = 10.42DD89 pKa = 3.96EE90 pKa = 4.36PWTLINTSLEE100 pKa = 4.4TFRR103 pKa = 11.84SPPANCFKK111 pKa = 10.83KK112 pKa = 10.47GPQNVEE118 pKa = 3.83VLFDD122 pKa = 4.19GDD124 pKa = 4.09PEE126 pKa = 4.33NVMLYY131 pKa = 7.93TAWKK135 pKa = 8.95FIYY138 pKa = 10.86YY139 pKa = 10.09EE140 pKa = 4.13DD141 pKa = 5.56TEE143 pKa = 4.56GQWQKK148 pKa = 9.84TEE150 pKa = 3.79GHH152 pKa = 6.43IDD154 pKa = 3.57YY155 pKa = 10.98AGLYY159 pKa = 8.59YY160 pKa = 10.57VEE162 pKa = 5.6GGIKK166 pKa = 9.76HH167 pKa = 6.0YY168 pKa = 10.57YY169 pKa = 10.02VEE171 pKa = 4.78FNVDD175 pKa = 2.93AQRR178 pKa = 11.84FGTRR182 pKa = 11.84GEE184 pKa = 3.95WEE186 pKa = 3.9VRR188 pKa = 11.84FNGEE192 pKa = 3.88TLFAPVTSSSPSPLEE207 pKa = 4.35EE208 pKa = 4.55IGEE211 pKa = 4.4RR212 pKa = 11.84PKK214 pKa = 11.31SPDD217 pKa = 3.27VPEE220 pKa = 4.3TTTDD224 pKa = 2.82TGTLQRR230 pKa = 11.84EE231 pKa = 4.27TRR233 pKa = 11.84HH234 pKa = 4.91TEE236 pKa = 3.74RR237 pKa = 11.84AEE239 pKa = 3.89STLPKK244 pKa = 9.62GRR246 pKa = 11.84RR247 pKa = 11.84YY248 pKa = 8.84EE249 pKa = 4.16RR250 pKa = 11.84KK251 pKa = 9.12EE252 pKa = 3.77SSPTSTSLRR261 pKa = 11.84GRR263 pKa = 11.84QKK265 pKa = 10.9VSGHH269 pKa = 4.82TSRR272 pKa = 11.84KK273 pKa = 8.43KK274 pKa = 8.75EE275 pKa = 3.9SRR277 pKa = 11.84RR278 pKa = 11.84SRR280 pKa = 11.84STSSGRR286 pKa = 11.84LGTDD290 pKa = 2.8QAAARR295 pKa = 11.84GRR297 pKa = 11.84GQRR300 pKa = 11.84QARR303 pKa = 11.84PRR305 pKa = 11.84TRR307 pKa = 11.84SRR309 pKa = 11.84SRR311 pKa = 11.84RR312 pKa = 11.84RR313 pKa = 11.84SRR315 pKa = 11.84SRR317 pKa = 11.84SKK319 pKa = 11.05GGGRR323 pKa = 11.84TTAEE327 pKa = 4.1SRR329 pKa = 11.84RR330 pKa = 11.84GRR332 pKa = 11.84CGGRR336 pKa = 11.84GYY338 pKa = 8.69FTRR341 pKa = 11.84SRR343 pKa = 11.84SRR345 pKa = 11.84SAEE348 pKa = 3.85SRR350 pKa = 11.84STDD353 pKa = 2.89QCGILPSQVGTGVQSVGRR371 pKa = 11.84KK372 pKa = 7.53YY373 pKa = 10.16SSRR376 pKa = 11.84VEE378 pKa = 3.96RR379 pKa = 11.84LLAEE383 pKa = 4.47AVDD386 pKa = 4.02PPVILIRR393 pKa = 11.84GPPNTLKK400 pKa = 10.6CYY402 pKa = 10.23RR403 pKa = 11.84YY404 pKa = 9.67RR405 pKa = 11.84EE406 pKa = 4.05KK407 pKa = 11.01EE408 pKa = 4.02RR409 pKa = 11.84LKK411 pKa = 11.04GFYY414 pKa = 10.43DD415 pKa = 3.69RR416 pKa = 11.84FSTTWSWVGSEE427 pKa = 3.91GNARR431 pKa = 11.84LGRR434 pKa = 11.84ARR436 pKa = 11.84MLICFLNEE444 pKa = 3.55EE445 pKa = 3.96QRR447 pKa = 11.84EE448 pKa = 4.05RR449 pKa = 11.84FIDD452 pKa = 4.05KK453 pKa = 9.45MRR455 pKa = 11.84LPKK458 pKa = 10.68GVDD461 pKa = 2.66WSYY464 pKa = 12.12GNFASII470 pKa = 4.49

Molecular weight: 53.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2553

99

605

364.7

41.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.327 ± 0.204

2.35 ± 0.791

5.64 ± 0.483

7.521 ± 0.856

3.878 ± 0.424

7.09 ± 0.84

2.115 ± 0.23

4.779 ± 0.664

4.896 ± 0.76

8.931 ± 0.89

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.528 ± 0.457

4.152 ± 0.738

6.11 ± 1.166

4.505 ± 0.338

6.972 ± 1.24

7.286 ± 0.546

5.993 ± 0.977

6.11 ± 0.823

1.332 ± 0.366

3.486 ± 0.313
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski