Lizard adenovirus 2

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Atadenovirus; Lizard atadenovirus A

Average proteome isoelectric point is 6.71

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 34 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A076FTC5|A0A076FTC5_9ADEN Protein ORF2 OS=Lizard adenovirus 2 OX=874272 PE=4 SV=1
MM1 pKa = 7.81DD2 pKa = 4.38TFGLDD7 pKa = 3.23IVNMSTDD14 pKa = 3.89EE15 pKa = 3.7IAAILKK21 pKa = 10.32KK22 pKa = 9.63IDD24 pKa = 3.24RR25 pKa = 11.84FGYY28 pKa = 9.38EE29 pKa = 4.78LISINYY35 pKa = 8.97DD36 pKa = 3.18AFPFGPFRR44 pKa = 11.84MSFSLGSDD52 pKa = 2.61TVMYY56 pKa = 10.36YY57 pKa = 10.69VSQKK61 pKa = 11.1DD62 pKa = 3.9LALEE66 pKa = 4.12WDD68 pKa = 4.85PIQYY72 pKa = 10.7LNWIRR77 pKa = 11.84EE78 pKa = 4.12ASDD81 pKa = 5.32LNVNWVSCEE90 pKa = 3.52RR91 pKa = 11.84VPWWKK96 pKa = 10.08IFPMLEE102 pKa = 3.89EE103 pKa = 4.81RR104 pKa = 11.84KK105 pKa = 10.33DD106 pKa = 3.91SLWTCEE112 pKa = 3.72NSVFFIPPSRR122 pKa = 11.84SHH124 pKa = 7.03PSWEE128 pKa = 3.81YY129 pKa = 11.07FNYY132 pKa = 9.81FWSQCHH138 pKa = 6.09SDD140 pKa = 3.61APLDD144 pKa = 3.96IGWSS148 pKa = 3.51

Molecular weight: 17.57 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A076FUM5|A0A076FUM5_9ADEN 100K OS=Lizard adenovirus 2 OX=874272 PE=4 SV=1
MM1 pKa = 7.51ARR3 pKa = 11.84LRR5 pKa = 11.84LVTCRR10 pKa = 11.84TARR13 pKa = 11.84THH15 pKa = 4.23TRR17 pKa = 11.84RR18 pKa = 11.84RR19 pKa = 11.84PRR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84VTRR26 pKa = 11.84SRR28 pKa = 11.84TVTRR32 pKa = 11.84TTRR35 pKa = 11.84VTRR38 pKa = 11.84RR39 pKa = 11.84GHH41 pKa = 4.85NVVYY45 pKa = 8.98KK46 pKa = 8.94TMRR49 pKa = 11.84KK50 pKa = 5.48TARR53 pKa = 11.84IGSRR57 pKa = 11.84RR58 pKa = 11.84MRR60 pKa = 11.84GGFLPLLAPILAAAIGAIPGIVVAARR86 pKa = 11.84QKK88 pKa = 10.91

Molecular weight: 10.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

34

0

34

10779

57

1075

317.0

35.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.374 ± 0.303

2.301 ± 0.367

4.499 ± 0.234

5.956 ± 0.478

4.806 ± 0.27

6.244 ± 0.46

2.013 ± 0.203

4.49 ± 0.206

5.121 ± 0.547

9.676 ± 0.42

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.18 ± 0.111

5.167 ± 0.424

6.123 ± 0.369

4.166 ± 0.287

5.873 ± 0.559

7.672 ± 0.366

6.049 ± 0.389

6.086 ± 0.327

1.577 ± 0.146

3.627 ± 0.312
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski