Capybara microvirus Cap3_SP_367

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W4U3|A0A4P8W4U3_9VIRU Replication initiator protein OS=Capybara microvirus Cap3_SP_367 OX=2585436 PE=4 SV=1
MM1 pKa = 7.69ANGFDD6 pKa = 4.04SLHH9 pKa = 6.08ITDD12 pKa = 4.88AVPNKK17 pKa = 10.66SKK19 pKa = 10.91FDD21 pKa = 3.73LSRR24 pKa = 11.84PHH26 pKa = 6.43LTTMDD31 pKa = 3.67FGEE34 pKa = 4.25ITPVFCEE41 pKa = 4.01EE42 pKa = 4.56GLPGDD47 pKa = 4.21KK48 pKa = 9.92FTVDD52 pKa = 2.99MTAFARR58 pKa = 11.84LAPMVFPTYY67 pKa = 10.61GKK69 pKa = 10.45CCLKK73 pKa = 10.66SAAYY77 pKa = 9.91YY78 pKa = 9.58VDD80 pKa = 4.25YY81 pKa = 11.0YY82 pKa = 11.53QLADD86 pKa = 3.98DD87 pKa = 5.29FEE89 pKa = 6.05AFISGQTTYY98 pKa = 11.04RR99 pKa = 11.84GTTPQLRR106 pKa = 11.84VISADD111 pKa = 3.92GILDD115 pKa = 4.49LLTSNPSSEE124 pKa = 4.11FFNDD128 pKa = 3.4LSTEE132 pKa = 3.76IANPSSEE139 pKa = 4.18SEE141 pKa = 3.92YY142 pKa = 11.23DD143 pKa = 3.26FTFDD147 pKa = 3.15EE148 pKa = 5.25DD149 pKa = 5.55GIILYY154 pKa = 10.41YY155 pKa = 10.66KK156 pKa = 8.59FTRR159 pKa = 11.84KK160 pKa = 9.6GRR162 pKa = 11.84WVFKK166 pKa = 9.94CLRR169 pKa = 11.84SLGYY173 pKa = 10.15DD174 pKa = 2.83IPTQRR179 pKa = 11.84GDD181 pKa = 3.35SSVFSAMPLLAFFKK195 pKa = 10.61AYY197 pKa = 10.31NDD199 pKa = 3.55YY200 pKa = 10.0MALNSIQNMNITSQMLQAIKK220 pKa = 10.67NKK222 pKa = 9.24VSASVTVYY230 pKa = 9.99PYY232 pKa = 10.71EE233 pKa = 5.23GGAGSEE239 pKa = 5.01GYY241 pKa = 7.87TVSYY245 pKa = 10.41NGSNVISGDD254 pKa = 3.52VIRR257 pKa = 11.84AMFDD261 pKa = 3.76DD262 pKa = 4.75IRR264 pKa = 11.84LCFDD268 pKa = 3.23NDD270 pKa = 3.72YY271 pKa = 9.93VTSLWSTANQAYY283 pKa = 9.2PGLSQNITTPTLNGVQMNQSVVKK306 pKa = 10.03DD307 pKa = 3.55WNNTSVSGISGSISQRR323 pKa = 11.84SLDD326 pKa = 3.81VLRR329 pKa = 11.84MFDD332 pKa = 2.72NWVRR336 pKa = 11.84RR337 pKa = 11.84NNYY340 pKa = 9.41VGSKK344 pKa = 10.15DD345 pKa = 3.46VNQIYY350 pKa = 10.68ARR352 pKa = 11.84FGIHH356 pKa = 6.95PEE358 pKa = 3.81NFKK361 pKa = 11.09AKK363 pKa = 8.03YY364 pKa = 9.34SHH366 pKa = 6.86MIGKK370 pKa = 9.16SEE372 pKa = 4.48DD373 pKa = 3.86CIQVGDD379 pKa = 3.87VTSTSDD385 pKa = 3.26TYY387 pKa = 11.59QDD389 pKa = 3.35ASNGAVIGSYY399 pKa = 9.82AGKK402 pKa = 10.45GIASGDD408 pKa = 3.77SKK410 pKa = 10.89FVYY413 pKa = 10.58SPDD416 pKa = 3.31EE417 pKa = 4.29FGCLIILSWISVRR430 pKa = 11.84PMYY433 pKa = 10.28TRR435 pKa = 11.84GFQRR439 pKa = 11.84HH440 pKa = 5.61TLRR443 pKa = 11.84QSPTDD448 pKa = 4.11FYY450 pKa = 11.03TPEE453 pKa = 3.92FDD455 pKa = 4.09GVGGNAVSYY464 pKa = 11.15RR465 pKa = 11.84EE466 pKa = 3.74ITVPKK471 pKa = 9.7TVDD474 pKa = 3.67DD475 pKa = 4.31EE476 pKa = 5.36SMGYY480 pKa = 10.51YY481 pKa = 10.13NDD483 pKa = 3.49GVGFNEE489 pKa = 4.97RR490 pKa = 11.84YY491 pKa = 9.67CEE493 pKa = 3.92YY494 pKa = 10.43RR495 pKa = 11.84DD496 pKa = 3.61SSKK499 pKa = 11.07KK500 pKa = 10.83GIVSGDD506 pKa = 3.5FLLDD510 pKa = 3.13TGMDD514 pKa = 2.96AWHH517 pKa = 7.23FGRR520 pKa = 11.84DD521 pKa = 3.48LDD523 pKa = 5.11SLYY526 pKa = 10.65TSHH529 pKa = 7.19NLGAQTYY536 pKa = 9.4ALNTYY541 pKa = 7.92GVPGSVSEE549 pKa = 4.13YY550 pKa = 11.22DD551 pKa = 4.08RR552 pKa = 11.84IFNNAGSVAGRR563 pKa = 11.84DD564 pKa = 3.22HH565 pKa = 6.91FFISFYY571 pKa = 11.05FNVQAIRR578 pKa = 11.84PIKK581 pKa = 10.4NMNAVADD588 pKa = 4.59LGSGDD593 pKa = 3.64INISKK598 pKa = 10.36VGNEE602 pKa = 4.03VNN604 pKa = 3.5

Molecular weight: 67.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W584|A0A4P8W584_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_367 OX=2585436 PE=4 SV=1
MM1 pKa = 8.47DD2 pKa = 4.71ILNRR6 pKa = 11.84NKK8 pKa = 10.48NFIPGKK14 pKa = 10.21DD15 pKa = 2.96KK16 pKa = 10.93VTFSLPDD23 pKa = 3.4MKK25 pKa = 10.89SYY27 pKa = 10.32IYY29 pKa = 9.6SQRR32 pKa = 11.84KK33 pKa = 7.08IEE35 pKa = 4.13NYY37 pKa = 7.38EE38 pKa = 3.81TLAYY42 pKa = 8.62YY43 pKa = 8.79QWKK46 pKa = 8.1EE47 pKa = 3.92TVDD50 pKa = 4.06NDD52 pKa = 4.1GQCYY56 pKa = 9.4FYY58 pKa = 10.91TLTYY62 pKa = 10.49NDD64 pKa = 3.18NALPKK69 pKa = 10.29FNGVPCFDD77 pKa = 4.75YY78 pKa = 11.04EE79 pKa = 4.47DD80 pKa = 3.81HH81 pKa = 8.1DD82 pKa = 4.32KK83 pKa = 11.14FLDD86 pKa = 3.83VLSHH90 pKa = 6.87KK91 pKa = 10.38LLRR94 pKa = 11.84SYY96 pKa = 8.75GTKK99 pKa = 10.32LKK101 pKa = 10.8YY102 pKa = 10.52FSTTEE107 pKa = 3.71RR108 pKa = 11.84GEE110 pKa = 4.28GKK112 pKa = 10.49GFRR115 pKa = 11.84GKK117 pKa = 10.79GNNPHH122 pKa = 5.14YY123 pKa = 11.09HH124 pKa = 5.78MLFFLTNANNPNYY137 pKa = 9.46SYY139 pKa = 11.53KK140 pKa = 10.64KK141 pKa = 9.81IRR143 pKa = 11.84PTDD146 pKa = 3.7FCAIVKK152 pKa = 9.61NYY154 pKa = 8.0WQGTTKK160 pKa = 10.38EE161 pKa = 4.31GKK163 pKa = 9.55NVAQHH168 pKa = 5.31YY169 pKa = 9.35KK170 pKa = 10.6YY171 pKa = 10.79GIAAPGDD178 pKa = 3.38NFGLVKK184 pKa = 10.54SPQAVTYY191 pKa = 9.27CCKK194 pKa = 10.43YY195 pKa = 8.1VCKK198 pKa = 10.5DD199 pKa = 2.79AAEE202 pKa = 4.13RR203 pKa = 11.84SNYY206 pKa = 9.79DD207 pKa = 3.25SQVHH211 pKa = 5.65YY212 pKa = 10.5IVSKK216 pKa = 9.58TINEE220 pKa = 4.41TLSSVHH226 pKa = 5.66IQEE229 pKa = 4.64EE230 pKa = 4.47FLLSQVFSRR239 pKa = 11.84DD240 pKa = 3.26GLSMKK245 pKa = 10.3EE246 pKa = 4.03GLSMIKK252 pKa = 10.1DD253 pKa = 3.61CYY255 pKa = 10.94LRR257 pKa = 11.84TEE259 pKa = 4.45INSKK263 pKa = 8.88DD264 pKa = 3.63TPSTISYY271 pKa = 8.89WFIIHH276 pKa = 6.62SGLYY280 pKa = 10.32DD281 pKa = 3.55EE282 pKa = 5.19FRR284 pKa = 11.84SYY286 pKa = 11.13CILEE290 pKa = 4.4CQDD293 pKa = 4.0KK294 pKa = 10.58IRR296 pKa = 11.84EE297 pKa = 4.15RR298 pKa = 11.84VNEE301 pKa = 3.61FRR303 pKa = 11.84RR304 pKa = 11.84RR305 pKa = 11.84YY306 pKa = 8.23CGKK309 pKa = 9.57VRR311 pKa = 11.84HH312 pKa = 6.45SNDD315 pKa = 2.9FGLSGLSTIKK325 pKa = 10.83DD326 pKa = 3.56DD327 pKa = 3.58MNPRR331 pKa = 11.84VLFPSKK337 pKa = 10.18KK338 pKa = 8.35GYY340 pKa = 10.15KK341 pKa = 9.42YY342 pKa = 10.51RR343 pKa = 11.84PLPLYY348 pKa = 10.03YY349 pKa = 9.94YY350 pKa = 9.55RR351 pKa = 11.84KK352 pKa = 9.05KK353 pKa = 10.57YY354 pKa = 10.48CVVDD358 pKa = 3.37YY359 pKa = 11.34YY360 pKa = 10.95MQGDD364 pKa = 3.83KK365 pKa = 10.7KK366 pKa = 10.61IPYY369 pKa = 9.22YY370 pKa = 10.45RR371 pKa = 11.84LNDD374 pKa = 3.83LGVKK378 pKa = 8.03YY379 pKa = 9.37TNFKK383 pKa = 10.5LDD385 pKa = 3.45SLIDD389 pKa = 3.72SKK391 pKa = 11.48KK392 pKa = 8.81ITTEE396 pKa = 3.66KK397 pKa = 10.87ALSFVDD403 pKa = 4.01KK404 pKa = 10.93LGSGYY409 pKa = 10.27FYY411 pKa = 11.17SEE413 pKa = 4.02QFKK416 pKa = 11.11SLGMPEE422 pKa = 4.66NKK424 pKa = 9.34VKK426 pKa = 10.96YY427 pKa = 10.56LIGDD431 pKa = 4.36LNSSIKK437 pKa = 10.56DD438 pKa = 3.43NYY440 pKa = 9.77SVYY443 pKa = 10.88SVVYY447 pKa = 10.14KK448 pKa = 10.76NRR450 pKa = 11.84SLSGLEE456 pKa = 4.97DD457 pKa = 3.28IDD459 pKa = 5.73RR460 pKa = 11.84PLDD463 pKa = 3.68MYY465 pKa = 11.69NDD467 pKa = 3.01WCYY470 pKa = 11.3FNTPVIKK477 pKa = 10.2EE478 pKa = 4.37DD479 pKa = 3.36NSNTYY484 pKa = 8.04TAYY487 pKa = 10.7AFLKK491 pKa = 10.73SFTRR495 pKa = 11.84YY496 pKa = 10.74DD497 pKa = 3.44FTDD500 pKa = 4.19DD501 pKa = 4.29GLVHH505 pKa = 6.44TNSLTYY511 pKa = 9.93RR512 pKa = 11.84YY513 pKa = 9.54HH514 pKa = 7.78KK515 pKa = 10.76DD516 pKa = 3.3FEE518 pKa = 4.66CFLEE522 pKa = 4.53YY523 pKa = 10.42FDD525 pKa = 5.93LLDD528 pKa = 4.97SIIDD532 pKa = 3.83YY533 pKa = 11.39YY534 pKa = 11.0VMCDD538 pKa = 3.24SLEE541 pKa = 4.16KK542 pKa = 10.93EE543 pKa = 4.11NIARR547 pKa = 11.84QWRR550 pKa = 11.84DD551 pKa = 2.71TRR553 pKa = 11.84NVINSIKK560 pKa = 10.17HH561 pKa = 4.89PEE563 pKa = 4.1YY564 pKa = 10.85YY565 pKa = 10.79GLAVV569 pKa = 3.44

Molecular weight: 67.02 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1648

98

604

412.0

46.81

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.886 ± 1.797

1.578 ± 0.381

7.464 ± 0.6

5.34 ± 1.151

4.672 ± 0.804

6.25 ± 0.918

1.335 ± 0.38

5.825 ± 0.323

6.978 ± 1.359

6.675 ± 0.601

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.367 ± 0.249

6.553 ± 0.33

3.459 ± 0.183

3.762 ± 0.984

4.126 ± 0.324

8.495 ± 0.862

5.4 ± 0.384

6.189 ± 0.447

1.032 ± 0.166

6.614 ± 1.362
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski