Human respirovirus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Respirovirus

Average proteome isoelectric point is 7.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q84206|Q84206_9MONO Large structural protein OS=Human respirovirus 1 OX=12730 PE=4 SV=1
MM1 pKa = 8.15DD2 pKa = 4.41GQEE5 pKa = 4.2SSQNPSDD12 pKa = 3.36ILYY15 pKa = 9.4PEE17 pKa = 4.31CHH19 pKa = 6.89PEE21 pKa = 3.82LSHH24 pKa = 7.1SQGEE28 pKa = 4.38DD29 pKa = 3.18STVARR34 pKa = 11.84LVRR37 pKa = 11.84CEE39 pKa = 4.24PALQTEE45 pKa = 5.18GRR47 pKa = 11.84QHH49 pKa = 5.33NKK51 pKa = 9.9YY52 pKa = 10.76YY53 pKa = 10.71KK54 pKa = 10.1AQNN57 pKa = 3.37

Molecular weight: 6.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q84206|Q84206_9MONO Large structural protein OS=Human respirovirus 1 OX=12730 PE=4 SV=1
MM1 pKa = 7.21GRR3 pKa = 11.84SPPKK7 pKa = 9.82TLLTYY12 pKa = 10.44SIQNATLNSPIVRR25 pKa = 11.84GKK27 pKa = 9.69IAQLHH32 pKa = 5.44VLLDD36 pKa = 3.51VNQPYY41 pKa = 10.32RR42 pKa = 11.84LKK44 pKa = 10.69DD45 pKa = 3.44DD46 pKa = 4.37SIINITKK53 pKa = 10.09HH54 pKa = 5.98KK55 pKa = 9.46IRR57 pKa = 11.84NGGLSPRR64 pKa = 11.84QIKK67 pKa = 9.78IRR69 pKa = 11.84SLGKK73 pKa = 10.1ALQRR77 pKa = 11.84TIKK80 pKa = 10.89DD81 pKa = 3.11LDD83 pKa = 3.7RR84 pKa = 11.84YY85 pKa = 8.12TFEE88 pKa = 5.14PYY90 pKa = 8.3PTYY93 pKa = 10.52SQEE96 pKa = 4.42LLRR99 pKa = 11.84LDD101 pKa = 3.8IPEE104 pKa = 4.13ICDD107 pKa = 3.67KK108 pKa = 10.52IRR110 pKa = 11.84SVFASRR116 pKa = 11.84IADD119 pKa = 3.21QGVII123 pKa = 3.73

Molecular weight: 14.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

180

57

123

90.0

10.25

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.444 ± 0.432

1.667 ± 0.972

6.111 ± 0.448

5.0 ± 2.917

1.111 ± 0.587

5.0 ± 0.139

2.778 ± 1.312

8.889 ± 3.766

6.111 ± 1.374

10.0 ± 1.574

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.111 ± 0.34

4.444 ± 0.432

6.667 ± 0.185

7.222 ± 1.744

7.778 ± 1.327

8.333 ± 1.158

5.0 ± 0.787

3.889 ± 0.201

0.0 ± 0.0

4.444 ± 0.432
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski