Amino acid dipepetide frequency for Cluster bean endornavirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
1.902AlaAla: 1.902 ± 0.0
1.427AlaCys: 1.427 ± 0.0
2.853AlaAsp: 2.853 ± 0.0
3.329AlaGlu: 3.329 ± 0.0
0.951AlaPhe: 0.951 ± 0.0
2.378AlaGly: 2.378 ± 0.0
0.713AlaHis: 0.713 ± 0.0
3.566AlaIle: 3.566 ± 0.0
3.804AlaLys: 3.804 ± 0.0
6.895AlaLeu: 6.895 ± 0.0
1.664AlaMet: 1.664 ± 0.0
4.755AlaAsn: 4.755 ± 0.0
1.427AlaPro: 1.427 ± 0.0
1.902AlaGln: 1.902 ± 0.0
2.615AlaArg: 2.615 ± 0.0
5.468AlaSer: 5.468 ± 0.0
3.804AlaThr: 3.804 ± 0.0
2.14AlaVal: 2.14 ± 0.0
0.238AlaTrp: 0.238 ± 0.0
0.951AlaTyr: 0.951 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.951CysAla: 0.951 ± 0.0
2.615CysCys: 2.615 ± 0.0
0.951CysAsp: 0.951 ± 0.0
1.189CysGlu: 1.189 ± 0.0
0.951CysPhe: 0.951 ± 0.0
2.378CysGly: 2.378 ± 0.0
1.189CysHis: 1.189 ± 0.0
1.427CysIle: 1.427 ± 0.0
2.378CysLys: 2.378 ± 0.0
3.329CysLeu: 3.329 ± 0.0
1.427CysMet: 1.427 ± 0.0
1.664CysAsn: 1.664 ± 0.0
0.238CysPro: 0.238 ± 0.0
0.713CysGln: 0.713 ± 0.0
0.476CysArg: 0.476 ± 0.0
2.14CysSer: 2.14 ± 0.0
1.427CysThr: 1.427 ± 0.0
3.091CysVal: 3.091 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.713CysTyr: 0.713 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.993AspAla: 4.993 ± 0.0
1.427AspCys: 1.427 ± 0.0
5.231AspAsp: 5.231 ± 0.0
4.517AspGlu: 4.517 ± 0.0
1.427AspPhe: 1.427 ± 0.0
3.329AspGly: 3.329 ± 0.0
1.664AspHis: 1.664 ± 0.0
2.853AspIle: 2.853 ± 0.0
2.615AspLys: 2.615 ± 0.0
4.755AspLeu: 4.755 ± 0.0
1.664AspMet: 1.664 ± 0.0
2.853AspAsn: 2.853 ± 0.0
2.853AspPro: 2.853 ± 0.0
2.853AspGln: 2.853 ± 0.0
3.566AspArg: 3.566 ± 0.0
2.853AspSer: 2.853 ± 0.0
2.615AspThr: 2.615 ± 0.0
5.944AspVal: 5.944 ± 0.0
1.427AspTrp: 1.427 ± 0.0
1.189AspTyr: 1.189 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
2.615GluAla: 2.615 ± 0.0
1.427GluCys: 1.427 ± 0.0
3.804GluAsp: 3.804 ± 0.0
3.804GluGlu: 3.804 ± 0.0
3.329GluPhe: 3.329 ± 0.0
2.14GluGly: 2.14 ± 0.0
2.378GluHis: 2.378 ± 0.0
3.329GluIle: 3.329 ± 0.0
3.566GluLys: 3.566 ± 0.0
4.28GluLeu: 4.28 ± 0.0
1.902GluMet: 1.902 ± 0.0
2.615GluAsn: 2.615 ± 0.0
2.378GluPro: 2.378 ± 0.0
1.902GluGln: 1.902 ± 0.0
3.804GluArg: 3.804 ± 0.0
4.042GluSer: 4.042 ± 0.0
1.902GluThr: 1.902 ± 0.0
4.755GluVal: 4.755 ± 0.0
1.902GluTrp: 1.902 ± 0.0
2.615GluTyr: 2.615 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
0.713PheAla: 0.713 ± 0.0
0.713PheCys: 0.713 ± 0.0
1.902PheAsp: 1.902 ± 0.0
1.664PheGlu: 1.664 ± 0.0
0.476PhePhe: 0.476 ± 0.0
3.566PheGly: 3.566 ± 0.0
0.238PheHis: 0.238 ± 0.0
0.713PheIle: 0.713 ± 0.0
2.378PheLys: 2.378 ± 0.0
1.189PheLeu: 1.189 ± 0.0
0.0PheMet: 0.0 ± 0.0
2.378PheAsn: 2.378 ± 0.0
0.713PhePro: 0.713 ± 0.0
1.189PheGln: 1.189 ± 0.0
1.664PheArg: 1.664 ± 0.0
3.091PheSer: 3.091 ± 0.0
1.189PheThr: 1.189 ± 0.0
1.902PheVal: 1.902 ± 0.0
0.238PheTrp: 0.238 ± 0.0
1.189PheTyr: 1.189 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.755GlyAla: 4.755 ± 0.0
1.902GlyCys: 1.902 ± 0.0
4.755GlyAsp: 4.755 ± 0.0
3.804GlyGlu: 3.804 ± 0.0
1.189GlyPhe: 1.189 ± 0.0
4.517GlyGly: 4.517 ± 0.0
1.427GlyHis: 1.427 ± 0.0
2.615GlyIle: 2.615 ± 0.0
3.091GlyLys: 3.091 ± 0.0
4.993GlyLeu: 4.993 ± 0.0
3.566GlyMet: 3.566 ± 0.0
4.042GlyAsn: 4.042 ± 0.0
1.902GlyPro: 1.902 ± 0.0
2.14GlyGln: 2.14 ± 0.0
1.902GlyArg: 1.902 ± 0.0
3.329GlySer: 3.329 ± 0.0
2.615GlyThr: 2.615 ± 0.0
4.755GlyVal: 4.755 ± 0.0
1.189GlyTrp: 1.189 ± 0.0
0.951GlyTyr: 0.951 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.664HisAla: 1.664 ± 0.0
0.713HisCys: 0.713 ± 0.0
1.427HisAsp: 1.427 ± 0.0
1.427HisGlu: 1.427 ± 0.0
0.238HisPhe: 0.238 ± 0.0
1.902HisGly: 1.902 ± 0.0
1.664HisHis: 1.664 ± 0.0
2.14HisIle: 2.14 ± 0.0
1.664HisLys: 1.664 ± 0.0
2.378HisLeu: 2.378 ± 0.0
0.238HisMet: 0.238 ± 0.0
1.902HisAsn: 1.902 ± 0.0
1.427HisPro: 1.427 ± 0.0
0.713HisGln: 0.713 ± 0.0
1.427HisArg: 1.427 ± 0.0
2.378HisSer: 2.378 ± 0.0
2.14HisThr: 2.14 ± 0.0
2.378HisVal: 2.378 ± 0.0
1.189HisTrp: 1.189 ± 0.0
0.476HisTyr: 0.476 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
3.566IleAla: 3.566 ± 0.0
0.476IleCys: 0.476 ± 0.0
4.993IleAsp: 4.993 ± 0.0
3.329IleGlu: 3.329 ± 0.0
0.951IlePhe: 0.951 ± 0.0
2.615IleGly: 2.615 ± 0.0
1.664IleHis: 1.664 ± 0.0
1.902IleIle: 1.902 ± 0.0
4.993IleLys: 4.993 ± 0.0
4.28IleLeu: 4.28 ± 0.0
2.378IleMet: 2.378 ± 0.0
3.091IleAsn: 3.091 ± 0.0
0.951IlePro: 0.951 ± 0.0
1.427IleGln: 1.427 ± 0.0
3.804IleArg: 3.804 ± 0.0
5.468IleSer: 5.468 ± 0.0
4.517IleThr: 4.517 ± 0.0
4.042IleVal: 4.042 ± 0.0
0.713IleTrp: 0.713 ± 0.0
1.189IleTyr: 1.189 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.804LysAla: 3.804 ± 0.0
1.664LysCys: 1.664 ± 0.0
1.189LysAsp: 1.189 ± 0.0
3.566LysGlu: 3.566 ± 0.0
2.14LysPhe: 2.14 ± 0.0
1.189LysGly: 1.189 ± 0.0
1.427LysHis: 1.427 ± 0.0
3.804LysIle: 3.804 ± 0.0
1.902LysLys: 1.902 ± 0.0
7.133LysLeu: 7.133 ± 0.0
1.189LysMet: 1.189 ± 0.0
1.902LysAsn: 1.902 ± 0.0
2.615LysPro: 2.615 ± 0.0
4.755LysGln: 4.755 ± 0.0
3.091LysArg: 3.091 ± 0.0
4.993LysSer: 4.993 ± 0.0
4.993LysThr: 4.993 ± 0.0
7.133LysVal: 7.133 ± 0.0
1.664LysTrp: 1.664 ± 0.0
3.566LysTyr: 3.566 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.755LeuAla: 4.755 ± 0.0
2.615LeuCys: 2.615 ± 0.0
3.566LeuAsp: 3.566 ± 0.0
4.517LeuGlu: 4.517 ± 0.0
2.853LeuPhe: 2.853 ± 0.0
6.657LeuGly: 6.657 ± 0.0
1.664LeuHis: 1.664 ± 0.0
8.084LeuIle: 8.084 ± 0.0
7.133LeuLys: 7.133 ± 0.0
7.846LeuLeu: 7.846 ± 0.0
3.091LeuMet: 3.091 ± 0.0
4.28LeuAsn: 4.28 ± 0.0
4.042LeuPro: 4.042 ± 0.0
4.517LeuGln: 4.517 ± 0.0
3.091LeuArg: 3.091 ± 0.0
6.895LeuSer: 6.895 ± 0.0
5.944LeuThr: 5.944 ± 0.0
4.755LeuVal: 4.755 ± 0.0
2.14LeuTrp: 2.14 ± 0.0
2.14LeuTyr: 2.14 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.615MetAla: 2.615 ± 0.0
0.0MetCys: 0.0 ± 0.0
1.664MetAsp: 1.664 ± 0.0
2.853MetGlu: 2.853 ± 0.0
0.476MetPhe: 0.476 ± 0.0
2.853MetGly: 2.853 ± 0.0
1.189MetHis: 1.189 ± 0.0
2.14MetIle: 2.14 ± 0.0
2.14MetLys: 2.14 ± 0.0
3.091MetLeu: 3.091 ± 0.0
1.664MetMet: 1.664 ± 0.0
0.951MetAsn: 0.951 ± 0.0
1.189MetPro: 1.189 ± 0.0
2.615MetGln: 2.615 ± 0.0
1.189MetArg: 1.189 ± 0.0
3.329MetSer: 3.329 ± 0.0
2.14MetThr: 2.14 ± 0.0
3.091MetVal: 3.091 ± 0.0
0.238MetTrp: 0.238 ± 0.0
0.476MetTyr: 0.476 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.902AsnAla: 1.902 ± 0.0
2.378AsnCys: 2.378 ± 0.0
2.615AsnAsp: 2.615 ± 0.0
4.28AsnGlu: 4.28 ± 0.0
1.189AsnPhe: 1.189 ± 0.0
2.853AsnGly: 2.853 ± 0.0
1.189AsnHis: 1.189 ± 0.0
2.853AsnIle: 2.853 ± 0.0
4.28AsnLys: 4.28 ± 0.0
4.042AsnLeu: 4.042 ± 0.0
1.189AsnMet: 1.189 ± 0.0
3.329AsnAsn: 3.329 ± 0.0
1.664AsnPro: 1.664 ± 0.0
2.853AsnGln: 2.853 ± 0.0
2.14AsnArg: 2.14 ± 0.0
3.091AsnSer: 3.091 ± 0.0
1.902AsnThr: 1.902 ± 0.0
4.517AsnVal: 4.517 ± 0.0
1.427AsnTrp: 1.427 ± 0.0
2.378AsnTyr: 2.378 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.664ProAla: 1.664 ± 0.0
0.0ProCys: 0.0 ± 0.0
3.329ProAsp: 3.329 ± 0.0
1.664ProGlu: 1.664 ± 0.0
1.189ProPhe: 1.189 ± 0.0
3.566ProGly: 3.566 ± 0.0
0.476ProHis: 0.476 ± 0.0
2.853ProIle: 2.853 ± 0.0
1.664ProLys: 1.664 ± 0.0
1.664ProLeu: 1.664 ± 0.0
1.427ProMet: 1.427 ± 0.0
1.189ProAsn: 1.189 ± 0.0
1.427ProPro: 1.427 ± 0.0
0.476ProGln: 0.476 ± 0.0
1.427ProArg: 1.427 ± 0.0
2.378ProSer: 2.378 ± 0.0
2.615ProThr: 2.615 ± 0.0
4.755ProVal: 4.755 ± 0.0
0.476ProTrp: 0.476 ± 0.0
0.951ProTyr: 0.951 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.902GlnAla: 1.902 ± 0.0
0.951GlnCys: 0.951 ± 0.0
1.664GlnAsp: 1.664 ± 0.0
2.615GlnGlu: 2.615 ± 0.0
1.427GlnPhe: 1.427 ± 0.0
2.378GlnGly: 2.378 ± 0.0
1.902GlnHis: 1.902 ± 0.0
2.14GlnIle: 2.14 ± 0.0
1.189GlnLys: 1.189 ± 0.0
5.706GlnLeu: 5.706 ± 0.0
1.427GlnMet: 1.427 ± 0.0
1.902GlnAsn: 1.902 ± 0.0
1.427GlnPro: 1.427 ± 0.0
1.664GlnGln: 1.664 ± 0.0
1.664GlnArg: 1.664 ± 0.0
2.14GlnSer: 2.14 ± 0.0
2.378GlnThr: 2.378 ± 0.0
2.615GlnVal: 2.615 ± 0.0
1.664GlnTrp: 1.664 ± 0.0
1.664GlnTyr: 1.664 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
1.902ArgAla: 1.902 ± 0.0
1.427ArgCys: 1.427 ± 0.0
1.189ArgAsp: 1.189 ± 0.0
1.902ArgGlu: 1.902 ± 0.0
1.664ArgPhe: 1.664 ± 0.0
1.664ArgGly: 1.664 ± 0.0
1.902ArgHis: 1.902 ± 0.0
1.664ArgIle: 1.664 ± 0.0
2.853ArgLys: 2.853 ± 0.0
7.133ArgLeu: 7.133 ± 0.0
2.14ArgMet: 2.14 ± 0.0
2.378ArgAsn: 2.378 ± 0.0
2.378ArgPro: 2.378 ± 0.0
1.902ArgGln: 1.902 ± 0.0
1.902ArgArg: 1.902 ± 0.0
2.378ArgSer: 2.378 ± 0.0
4.28ArgThr: 4.28 ± 0.0
3.804ArgVal: 3.804 ± 0.0
0.238ArgTrp: 0.238 ± 0.0
1.189ArgTyr: 1.189 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.231SerAla: 5.231 ± 0.0
2.615SerCys: 2.615 ± 0.0
4.28SerAsp: 4.28 ± 0.0
4.28SerGlu: 4.28 ± 0.0
0.713SerPhe: 0.713 ± 0.0
4.517SerGly: 4.517 ± 0.0
1.902SerHis: 1.902 ± 0.0
4.28SerIle: 4.28 ± 0.0
5.231SerLys: 5.231 ± 0.0
5.944SerLeu: 5.944 ± 0.0
2.615SerMet: 2.615 ± 0.0
2.853SerAsn: 2.853 ± 0.0
0.951SerPro: 0.951 ± 0.0
3.804SerGln: 3.804 ± 0.0
2.853SerArg: 2.853 ± 0.0
4.042SerSer: 4.042 ± 0.0
4.042SerThr: 4.042 ± 0.0
5.468SerVal: 5.468 ± 0.0
2.378SerTrp: 2.378 ± 0.0
2.853SerTyr: 2.853 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
2.14ThrAla: 2.14 ± 0.0
2.14ThrCys: 2.14 ± 0.0
4.28ThrAsp: 4.28 ± 0.0
3.566ThrGlu: 3.566 ± 0.0
1.902ThrPhe: 1.902 ± 0.0
3.329ThrGly: 3.329 ± 0.0
2.378ThrHis: 2.378 ± 0.0
5.231ThrIle: 5.231 ± 0.0
4.993ThrLys: 4.993 ± 0.0
3.329ThrLeu: 3.329 ± 0.0
2.853ThrMet: 2.853 ± 0.0
3.329ThrAsn: 3.329 ± 0.0
2.378ThrPro: 2.378 ± 0.0
1.427ThrGln: 1.427 ± 0.0
1.902ThrArg: 1.902 ± 0.0
4.993ThrSer: 4.993 ± 0.0
2.853ThrThr: 2.853 ± 0.0
4.042ThrVal: 4.042 ± 0.0
0.713ThrTrp: 0.713 ± 0.0
3.091ThrTyr: 3.091 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
3.329ValAla: 3.329 ± 0.0
2.853ValCys: 2.853 ± 0.0
7.608ValAsp: 7.608 ± 0.0
3.804ValGlu: 3.804 ± 0.0
2.615ValPhe: 2.615 ± 0.0
4.993ValGly: 4.993 ± 0.0
3.329ValHis: 3.329 ± 0.0
4.042ValIle: 4.042 ± 0.0
4.042ValLys: 4.042 ± 0.0
6.895ValLeu: 6.895 ± 0.0
2.615ValMet: 2.615 ± 0.0
4.993ValAsn: 4.993 ± 0.0
3.804ValPro: 3.804 ± 0.0
2.378ValGln: 2.378 ± 0.0
3.329ValArg: 3.329 ± 0.0
3.804ValSer: 3.804 ± 0.0
5.944ValThr: 5.944 ± 0.0
6.657ValVal: 6.657 ± 0.0
0.713ValTrp: 0.713 ± 0.0
2.14ValTyr: 2.14 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.951TrpAla: 0.951 ± 0.0
0.476TrpCys: 0.476 ± 0.0
0.951TrpAsp: 0.951 ± 0.0
0.476TrpGlu: 0.476 ± 0.0
0.713TrpPhe: 0.713 ± 0.0
0.713TrpGly: 0.713 ± 0.0
0.476TrpHis: 0.476 ± 0.0
0.0TrpIle: 0.0 ± 0.0
1.427TrpLys: 1.427 ± 0.0
2.14TrpLeu: 2.14 ± 0.0
1.427TrpMet: 1.427 ± 0.0
0.713TrpAsn: 0.713 ± 0.0
0.476TrpPro: 0.476 ± 0.0
0.713TrpGln: 0.713 ± 0.0
1.189TrpArg: 1.189 ± 0.0
2.378TrpSer: 2.378 ± 0.0
1.189TrpThr: 1.189 ± 0.0
1.664TrpVal: 1.664 ± 0.0
0.713TrpTrp: 0.713 ± 0.0
0.713TrpTyr: 0.713 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.427TyrAla: 1.427 ± 0.0
1.427TyrCys: 1.427 ± 0.0
2.378TyrAsp: 2.378 ± 0.0
1.902TyrGlu: 1.902 ± 0.0
0.713TyrPhe: 0.713 ± 0.0
1.902TyrGly: 1.902 ± 0.0
0.713TyrHis: 0.713 ± 0.0
0.713TyrIle: 0.713 ± 0.0
2.378TyrLys: 2.378 ± 0.0
3.566TyrLeu: 3.566 ± 0.0
1.189TyrMet: 1.189 ± 0.0
0.951TyrAsn: 0.951 ± 0.0
0.951TyrPro: 0.951 ± 0.0
0.713TyrGln: 0.713 ± 0.0
2.853TyrArg: 2.853 ± 0.0
1.664TyrSer: 1.664 ± 0.0
2.378TyrThr: 2.378 ± 0.0
2.378TyrVal: 2.378 ± 0.0
0.238TyrTrp: 0.238 ± 0.0
1.189TyrTyr: 1.189 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (4207 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski