Ornithinicoccus hortensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria;

Average proteome isoelectric point is 5.9

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3571 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A542YLS3|A0A542YLS3_9MICO Amino acid/amide ABC transporter ATP-binding protein 1 (HAAT family) OS=Ornithinicoccus hortensis OX=82346 GN=FB467_0093 PE=4 SV=1
MM1 pKa = 7.62SSTAHH6 pKa = 6.73HH7 pKa = 6.8DD8 pKa = 3.36QPTFEE13 pKa = 4.52GRR15 pKa = 11.84PLARR19 pKa = 11.84PEE21 pKa = 5.5DD22 pKa = 4.05DD23 pKa = 6.52LEE25 pKa = 4.48DD26 pKa = 3.48QGAGFDD32 pKa = 3.51AATLVTRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84VLSVVGVGVGAAALAACGTDD61 pKa = 2.96ATTSTSSSSSTSSADD76 pKa = 3.28NGSATSGGASADD88 pKa = 3.71SGTATSDD95 pKa = 2.75GSTAAGTLEE104 pKa = 4.72EE105 pKa = 4.96IPEE108 pKa = 4.35EE109 pKa = 4.33TNGPYY114 pKa = 9.97PADD117 pKa = 3.5GTQDD121 pKa = 3.47VNVLTEE127 pKa = 4.09SGIVRR132 pKa = 11.84QDD134 pKa = 2.53ITTSLDD140 pKa = 3.19GGSSVDD146 pKa = 4.06GVALTMTFLVHH157 pKa = 7.6DD158 pKa = 4.56MVNDD162 pKa = 3.58QPFEE166 pKa = 4.15GVAVYY171 pKa = 9.59AWQCDD176 pKa = 3.4AEE178 pKa = 4.73GRR180 pKa = 11.84YY181 pKa = 10.61SMYY184 pKa = 9.51TQGVEE189 pKa = 4.01DD190 pKa = 4.15EE191 pKa = 4.2TWLRR195 pKa = 11.84GIQVADD201 pKa = 3.43SDD203 pKa = 4.34GMVSFSTIVPGCYY216 pKa = 9.3SGRR219 pKa = 11.84WPHH222 pKa = 6.02IHH224 pKa = 6.47FEE226 pKa = 4.28VYY228 pKa = 10.33PDD230 pKa = 3.28VDD232 pKa = 3.57SATDD236 pKa = 3.38VGNVIATSQVAFPEE250 pKa = 5.17DD251 pKa = 3.95ILTEE255 pKa = 3.96IYY257 pKa = 9.73TRR259 pKa = 11.84SEE261 pKa = 4.23YY262 pKa = 10.97AGSAEE267 pKa = 3.75NMAAVGSVEE276 pKa = 3.65QDD278 pKa = 3.25MIFADD283 pKa = 4.59SLDD286 pKa = 3.57QQMPTISGDD295 pKa = 3.11VDD297 pKa = 3.32SGYY300 pKa = 10.44IATLTVNVDD309 pKa = 3.4TTTEE313 pKa = 3.73ATGAGGGPGGGAGGPGGGGQPPSGGGPGGEE343 pKa = 4.32PPSGEE348 pKa = 4.11PPTNN352 pKa = 3.36

Molecular weight: 35.61 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A542YNC8|A0A542YNC8_9MICO L-aminopeptidase/D-esterase-like protein OS=Ornithinicoccus hortensis OX=82346 GN=FB467_0690 PE=3 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84ARR15 pKa = 11.84VHH17 pKa = 5.99GFRR20 pKa = 11.84LRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84SILANRR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 9.8GRR40 pKa = 11.84SSLSAA45 pKa = 3.62

Molecular weight: 5.37 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3571

0

3571

1191262

29

2581

333.6

35.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.878 ± 0.052

0.663 ± 0.012

6.402 ± 0.034

6.107 ± 0.043

2.68 ± 0.025

9.669 ± 0.035

2.184 ± 0.022

3.374 ± 0.029

1.575 ± 0.028

10.421 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.835 ± 0.018

1.623 ± 0.021

5.863 ± 0.031

3.041 ± 0.025

7.563 ± 0.046

5.053 ± 0.025

6.236 ± 0.035

9.351 ± 0.037

1.559 ± 0.019

1.924 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski