Ustilaginoidea virens RNA virus L

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Victorivirus; unclassified Victorivirus

Average proteome isoelectric point is 7.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A097I5E2|A0A097I5E2_9VIRU Coat protein OS=Ustilaginoidea virens RNA virus L OX=1561171 PE=4 SV=1
MM1 pKa = 8.37SEE3 pKa = 3.82INTNAFLAGILANARR18 pKa = 11.84GGHH21 pKa = 5.8IADD24 pKa = 3.5NNTFRR29 pKa = 11.84RR30 pKa = 11.84YY31 pKa = 9.45ASSVRR36 pKa = 11.84SSATIGGNEE45 pKa = 4.23DD46 pKa = 3.12ARR48 pKa = 11.84LTRR51 pKa = 11.84IFYY54 pKa = 10.34EE55 pKa = 4.17VGRR58 pKa = 11.84VHH60 pKa = 7.34ANARR64 pKa = 11.84LALAAHH70 pKa = 7.49ASTMLRR76 pKa = 11.84IDD78 pKa = 3.28ASYY81 pKa = 8.39PTASVLAEE89 pKa = 4.09EE90 pKa = 5.08FVGLSKK96 pKa = 10.65KK97 pKa = 10.43YY98 pKa = 10.69SNFAATFAYY107 pKa = 10.27SSLAGVVEE115 pKa = 4.68RR116 pKa = 11.84VARR119 pKa = 11.84GLAAASLFNDD129 pKa = 3.3VDD131 pKa = 4.35SDD133 pKa = 3.93TLAANQPVRR142 pKa = 11.84VSALGTYY149 pKa = 9.7DD150 pKa = 3.74GPVNSMVNTVFIPRR164 pKa = 11.84LVNSTLTGDD173 pKa = 3.85VFAVLVNAVAGEE185 pKa = 4.34GGSVATDD192 pKa = 3.4TLEE195 pKa = 3.97VNAADD200 pKa = 4.04RR201 pKa = 11.84RR202 pKa = 11.84PIIGTVDD209 pKa = 2.9AVGFPRR215 pKa = 11.84AAVDD219 pKa = 3.45ALRR222 pKa = 11.84LLGANMIASNQGPLFALALVRR243 pKa = 11.84GLHH246 pKa = 6.02KK247 pKa = 10.53VLTVVGHH254 pKa = 5.36TDD256 pKa = 2.77EE257 pKa = 5.75GGITRR262 pKa = 11.84DD263 pKa = 3.4LLRR266 pKa = 11.84AQSFGVPFGGIHH278 pKa = 6.46YY279 pKa = 10.43GLDD282 pKa = 3.42VYY284 pKa = 11.41AGLPALATNSAADD297 pKa = 3.44VASYY301 pKa = 11.3VDD303 pKa = 4.04SLALASAAAVAHH315 pKa = 6.8CDD317 pKa = 3.02PGTTYY322 pKa = 10.82GGRR325 pKa = 11.84WYY327 pKa = 8.55PTFYY331 pKa = 10.69CGASNGDD338 pKa = 3.2AEE340 pKa = 4.78TRR342 pKa = 11.84SGTHH346 pKa = 6.01LAGNDD351 pKa = 2.9EE352 pKa = 4.15MAVNNRR358 pKa = 11.84SQLVADD364 pKa = 4.67LAKK367 pKa = 10.69FSDD370 pKa = 3.44IFIPALARR378 pKa = 11.84IFQCGGDD385 pKa = 3.7PAVAASILTSSGHH398 pKa = 6.65ALSKK402 pKa = 10.59HH403 pKa = 4.57NRR405 pKa = 11.84HH406 pKa = 5.83LRR408 pKa = 11.84MATVTPFFWIEE419 pKa = 3.71PTSILPHH426 pKa = 6.72DD427 pKa = 4.41AFGTRR432 pKa = 11.84AEE434 pKa = 4.41AEE436 pKa = 4.27GSGALASRR444 pKa = 11.84DD445 pKa = 3.59QPRR448 pKa = 11.84TKK450 pKa = 10.38PIFEE454 pKa = 5.82DD455 pKa = 2.58IWTADD460 pKa = 3.28TGDD463 pKa = 4.0LAFSSYY469 pKa = 10.28HH470 pKa = 4.57VQLRR474 pKa = 11.84NARR477 pKa = 11.84SAWFLAHH484 pKa = 5.37WHH486 pKa = 4.59GHH488 pKa = 4.74EE489 pKa = 4.53LNGLGATQVRR499 pKa = 11.84QLDD502 pKa = 3.99PNAIIQPGGHH512 pKa = 4.81QVEE515 pKa = 4.6EE516 pKa = 3.93VRR518 pKa = 11.84DD519 pKa = 3.85RR520 pKa = 11.84VEE522 pKa = 3.81SALPLSAYY530 pKa = 9.8LWQRR534 pKa = 11.84GQSPFCAPGEE544 pKa = 4.05FMNLAGTMGIMVNHH558 pKa = 5.6YY559 pKa = 8.86TFDD562 pKa = 3.7GDD564 pKa = 4.41GIPRR568 pKa = 11.84LQHH571 pKa = 6.31LPTARR576 pKa = 11.84EE577 pKa = 3.86FLGATVTLTVGRR589 pKa = 11.84PQGINDD595 pKa = 4.25SKK597 pKa = 11.72SNWADD602 pKa = 3.25SQVRR606 pKa = 11.84RR607 pKa = 11.84ARR609 pKa = 11.84TRR611 pKa = 11.84AARR614 pKa = 11.84EE615 pKa = 3.86LAASAARR622 pKa = 11.84VRR624 pKa = 11.84AFGRR628 pKa = 11.84PDD630 pKa = 3.17VAAMPILTTAPPPRR644 pKa = 11.84HH645 pKa = 5.88AQGAQPVPARR655 pKa = 11.84DD656 pKa = 3.46HH657 pKa = 7.15DD658 pKa = 4.18VGGGVDD664 pKa = 3.26GWRR667 pKa = 11.84RR668 pKa = 11.84TSVGVNDD675 pKa = 3.66STTAYY680 pKa = 9.88PYY682 pKa = 10.97GEE684 pKa = 4.19PLGVTAHH691 pKa = 5.9HH692 pKa = 5.99QPVRR696 pKa = 11.84FPQLARR702 pKa = 11.84TLASGGTAAVPPPPPAATSSDD723 pKa = 3.74DD724 pKa = 3.49VSPDD728 pKa = 3.2VPVALSPSAAPLSGPTQSS746 pKa = 3.77

Molecular weight: 78.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A097I5E2|A0A097I5E2_9VIRU Coat protein OS=Ustilaginoidea virens RNA virus L OX=1561171 PE=4 SV=1
MM1 pKa = 8.2DD2 pKa = 4.41IYY4 pKa = 11.13EE5 pKa = 4.22RR6 pKa = 11.84AKK8 pKa = 11.04DD9 pKa = 3.94FGPLGRR15 pKa = 11.84VLIEE19 pKa = 5.07HH20 pKa = 6.99IEE22 pKa = 4.08SCPDD26 pKa = 2.84IVSDD30 pKa = 4.65FRR32 pKa = 11.84EE33 pKa = 4.16TFIGRR38 pKa = 11.84LIKK41 pKa = 9.73LTNSANSLRR50 pKa = 11.84TRR52 pKa = 11.84SYY54 pKa = 10.87LLPAAVSLLCLDD66 pKa = 5.04FPLQEE71 pKa = 4.81DD72 pKa = 3.76MTFASFLRR80 pKa = 11.84WVRR83 pKa = 11.84EE84 pKa = 3.95AYY86 pKa = 10.11DD87 pKa = 3.98LNIVDD92 pKa = 4.45SPAFGEE98 pKa = 4.22SDD100 pKa = 4.01LAALPPGRR108 pKa = 11.84LVRR111 pKa = 11.84RR112 pKa = 11.84LCRR115 pKa = 11.84SKK117 pKa = 11.02LRR119 pKa = 11.84LASAFPEE126 pKa = 4.36PEE128 pKa = 3.99LLAGQTKK135 pKa = 10.46PNMKK139 pKa = 9.96LGPLISSSVIMMGSEE154 pKa = 3.57RR155 pKa = 11.84VAALLRR161 pKa = 11.84SSWNMRR167 pKa = 11.84SDD169 pKa = 3.26RR170 pKa = 11.84VMSKK174 pKa = 10.42LVYY177 pKa = 10.62AFVLSRR183 pKa = 11.84RR184 pKa = 11.84FGEE187 pKa = 4.44VGHH190 pKa = 6.64KK191 pKa = 9.63LANFLVNNPDD201 pKa = 3.44DD202 pKa = 4.0AKK204 pKa = 11.14YY205 pKa = 10.63ISLALKK211 pKa = 10.63ALGLNSTDD219 pKa = 3.07WGSVLCEE226 pKa = 3.83ANTLAGRR233 pKa = 11.84GTGGIDD239 pKa = 3.62LARR242 pKa = 11.84EE243 pKa = 3.66AAQRR247 pKa = 11.84CDD249 pKa = 3.22RR250 pKa = 11.84DD251 pKa = 3.84FVDD254 pKa = 3.14SHH256 pKa = 6.9IVHH259 pKa = 6.63VDD261 pKa = 3.18PDD263 pKa = 3.69EE264 pKa = 4.44LRR266 pKa = 11.84PHH268 pKa = 6.52VKK270 pKa = 10.36SILDD274 pKa = 3.55RR275 pKa = 11.84EE276 pKa = 4.49LKK278 pKa = 10.36NIRR281 pKa = 11.84SMAPLDD287 pKa = 4.52DD288 pKa = 4.07FWTSRR293 pKa = 11.84WLWCVNGSQTTEE305 pKa = 3.44SSLALGIDD313 pKa = 3.22PHH315 pKa = 6.32YY316 pKa = 11.15CKK318 pKa = 9.89ATHH321 pKa = 5.64KK322 pKa = 10.03RR323 pKa = 11.84AYY325 pKa = 9.41RR326 pKa = 11.84RR327 pKa = 11.84SASEE331 pKa = 3.76HH332 pKa = 5.85VKK334 pKa = 10.85NEE336 pKa = 4.97PITSWDD342 pKa = 2.86GRR344 pKa = 11.84TSVSVSAKK352 pKa = 10.53LEE354 pKa = 4.25AGKK357 pKa = 8.27TRR359 pKa = 11.84AIFACDD365 pKa = 3.1TRR367 pKa = 11.84SYY369 pKa = 11.08FAFSWILSAAQRR381 pKa = 11.84DD382 pKa = 3.9WANSRR387 pKa = 11.84VLLDD391 pKa = 4.05PGVGGHH397 pKa = 7.09LGMFQRR403 pKa = 11.84ISRR406 pKa = 11.84AQRR409 pKa = 11.84GGGVNLMLDD418 pKa = 3.48YY419 pKa = 11.52DD420 pKa = 4.65DD421 pKa = 6.31FNSQHH426 pKa = 5.95STSSMQVVFDD436 pKa = 4.26EE437 pKa = 4.93LCSKK441 pKa = 9.74YY442 pKa = 10.67NCPSWYY448 pKa = 9.74RR449 pKa = 11.84DD450 pKa = 3.36TLVGSFEE457 pKa = 4.57KK458 pKa = 10.59MFVNCGNEE466 pKa = 3.92RR467 pKa = 11.84KK468 pKa = 9.35RR469 pKa = 11.84VLGTLMSGHH478 pKa = 7.18RR479 pKa = 11.84GTTFINSVLNAAYY492 pKa = 9.39IRR494 pKa = 11.84LAIGGSKK501 pKa = 9.97FDD503 pKa = 4.37RR504 pKa = 11.84LLSLHH509 pKa = 6.53TGDD512 pKa = 5.19DD513 pKa = 3.71VYY515 pKa = 11.35IRR517 pKa = 11.84ANTLADD523 pKa = 3.7CVHH526 pKa = 6.88ILDD529 pKa = 3.95STKK532 pKa = 10.92EE533 pKa = 3.88LGCRR537 pKa = 11.84MNPTKK542 pKa = 10.56QSIGYY547 pKa = 9.19KK548 pKa = 9.28GAEE551 pKa = 4.25FLRR554 pKa = 11.84MGMRR558 pKa = 11.84QDD560 pKa = 3.81DD561 pKa = 4.06CFGYY565 pKa = 7.96FTRR568 pKa = 11.84ALSSFVSGNWANTDD582 pKa = 3.19SLDD585 pKa = 3.66PVEE588 pKa = 4.84GLRR591 pKa = 11.84SAIGGCRR598 pKa = 11.84SMINRR603 pKa = 11.84GQVSAVAEE611 pKa = 4.22LVGPAPRR618 pKa = 11.84YY619 pKa = 9.79RR620 pKa = 11.84PGLGARR626 pKa = 11.84TLCKK630 pKa = 9.61MLKK633 pKa = 10.18CEE635 pKa = 3.87IAIVGSPVFGGSGFLTTYY653 pKa = 10.59RR654 pKa = 11.84VTTRR658 pKa = 11.84VEE660 pKa = 3.39DD661 pKa = 4.52RR662 pKa = 11.84IRR664 pKa = 11.84VDD666 pKa = 3.46KK667 pKa = 10.82RR668 pKa = 11.84WARR671 pKa = 11.84YY672 pKa = 7.53ATGDD676 pKa = 3.72YY677 pKa = 10.0LAHH680 pKa = 6.3HH681 pKa = 6.09TTSIEE686 pKa = 3.84AAALEE691 pKa = 4.4MSGSAGTNLLIISSYY706 pKa = 10.52VRR708 pKa = 11.84GLNEE712 pKa = 4.02EE713 pKa = 4.19RR714 pKa = 11.84VQPKK718 pKa = 9.05PAPSWKK724 pKa = 9.76KK725 pKa = 10.13LPRR728 pKa = 11.84INLRR732 pKa = 11.84GYY734 pKa = 10.51ACASDD739 pKa = 4.39LVNKK743 pKa = 8.18QRR745 pKa = 11.84KK746 pKa = 9.14RR747 pKa = 11.84GVLSHH752 pKa = 6.54YY753 pKa = 10.41PLINLIKK760 pKa = 10.51NRR762 pKa = 11.84LDD764 pKa = 3.27EE765 pKa = 4.62AMLRR769 pKa = 11.84TLIAEE774 pKa = 4.06EE775 pKa = 4.16LGYY778 pKa = 10.82VPEE781 pKa = 4.52GEE783 pKa = 4.25PYY785 pKa = 10.44KK786 pKa = 10.55IAFGEE791 pKa = 4.1DD792 pKa = 3.57SNSKK796 pKa = 10.36RR797 pKa = 11.84ILGVLSYY804 pKa = 11.28ADD806 pKa = 3.34ASAYY810 pKa = 10.19CSRR813 pKa = 11.84TDD815 pKa = 3.14SGSVYY820 pKa = 8.51TLCRR824 pKa = 11.84VAMM827 pKa = 4.53

Molecular weight: 91.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1573

746

827

786.5

85.2

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.507 ± 2.256

1.526 ± 0.637

5.785 ± 0.1

3.878 ± 0.511

3.751 ± 0.088

8.328 ± 0.506

2.479 ± 0.388

4.132 ± 0.416

2.606 ± 1.073

9.599 ± 0.829

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.971 ± 0.405

4.069 ± 0.056

5.022 ± 0.822

2.225 ± 0.38

7.883 ± 0.587

8.455 ± 0.696

5.658 ± 0.672

6.993 ± 0.589

1.335 ± 0.169

2.797 ± 0.334
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski