Hepatitis C virus genotype 1a (isolate H77) (HCV)
Average proteome isoelectric point is 8.35
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|P27958|POLG_HCV77 Genome polyprotein OS=Hepatitis C virus genotype 1a (isolate H77) OX=63746 PE=1 SV=3
MM1 pKa = 7.02 STNPKK6 pKa = 8.89 PQRR9 pKa = 11.84 KK10 pKa = 6.64 TKK12 pKa = 10.42 RR13 pKa = 11.84 NTNRR17 pKa = 11.84 RR18 pKa = 11.84 PQDD21 pKa = 3.19 VKK23 pKa = 11.12 FPGGGQIVGGVYY35 pKa = 10.66 LLPRR39 pKa = 11.84 RR40 pKa = 11.84 GPRR43 pKa = 11.84 LGVRR47 pKa = 11.84 ATRR50 pKa = 11.84 KK51 pKa = 7.58 TSEE54 pKa = 3.85 RR55 pKa = 11.84 SQPRR59 pKa = 11.84 GRR61 pKa = 11.84 RR62 pKa = 11.84 QPIPKK67 pKa = 9.59 ARR69 pKa = 11.84 RR70 pKa = 11.84 PEE72 pKa = 3.84 GRR74 pKa = 11.84 TWAQPGYY81 pKa = 9.32 PWPLYY86 pKa = 10.66 GNEE89 pKa = 4.09 GCGWAGWLLSPRR101 pKa = 11.84 GSRR104 pKa = 11.84 PSWGPTDD111 pKa = 3.29 PRR113 pKa = 11.84 RR114 pKa = 11.84 RR115 pKa = 11.84 SRR117 pKa = 11.84 NLGKK121 pKa = 10.85 VIDD124 pKa = 3.97 TLTCGFADD132 pKa = 3.75 LMGYY136 pKa = 9.34 IPLVGAPLGGAARR149 pKa = 11.84 ALAHH153 pKa = 5.78 GVRR156 pKa = 11.84 VLEE159 pKa = 5.04 DD160 pKa = 3.44 GVNYY164 pKa = 8.67 ATGNLPGCSFSIFLLALLSCLTVPASAYY192 pKa = 7.58 QVRR195 pKa = 11.84 NSSGLYY201 pKa = 10.01 HH202 pKa = 5.77 VTNDD206 pKa = 3.94 CPNSSVVYY214 pKa = 9.19 EE215 pKa = 4.02 AADD218 pKa = 4.68 AILHH222 pKa = 5.76 TPGCVPCVRR231 pKa = 11.84 EE232 pKa = 4.55 GNASRR237 pKa = 11.84 CWVAVTPTVATRR249 pKa = 11.84 DD250 pKa = 3.51 GKK252 pKa = 11.25 LPTTQLRR259 pKa = 11.84 RR260 pKa = 11.84 HH261 pKa = 6.37 IDD263 pKa = 3.6 LLVGSATLCSALYY276 pKa = 10.88 VGDD279 pKa = 3.7 LCGSVFLVGQLFTFSPRR296 pKa = 11.84 HH297 pKa = 5.22 HH298 pKa = 6.95 WTTQDD303 pKa = 4.11 CNCSIYY309 pKa = 9.95 PGHH312 pKa = 6.19 ITGHH316 pKa = 5.05 RR317 pKa = 11.84 MAWNMMMNWSPTAALVVAQLLRR339 pKa = 11.84 IPQAIMDD346 pKa = 4.91 MIAGAHH352 pKa = 5.67 WGVLAGIKK360 pKa = 9.59 YY361 pKa = 10.47 FSMVGNWAKK370 pKa = 10.94 VLVVLLLFAGVDD382 pKa = 3.57 AEE384 pKa = 4.48 THH386 pKa = 4.24 VTGGNAGRR394 pKa = 11.84 TTAGLVGLLTPGAKK408 pKa = 9.75 QNIQLINTNGSWHH421 pKa = 6.65 INSTALNCNEE431 pKa = 4.19 SLNTGWLAGLFYY443 pKa = 9.73 QHH445 pKa = 6.89 KK446 pKa = 9.47 FNSSGCPEE454 pKa = 4.06 RR455 pKa = 11.84 LASCRR460 pKa = 11.84 RR461 pKa = 11.84 LTDD464 pKa = 4.35 FAQGWGPISYY474 pKa = 10.96 ANGSGLDD481 pKa = 3.41 EE482 pKa = 5.9 RR483 pKa = 11.84 PYY485 pKa = 10.22 CWHH488 pKa = 6.35 YY489 pKa = 10.29 PPRR492 pKa = 11.84 PCGIVPAKK500 pKa = 9.97 SVCGPVYY507 pKa = 10.55 CFTPSPVVVGTTDD520 pKa = 3.09 RR521 pKa = 11.84 SGAPTYY527 pKa = 11.0 SWGANDD533 pKa = 3.4 TDD535 pKa = 4.23 VFVLNNTRR543 pKa = 11.84 PPLGNWFGCTWMNSTGFTKK562 pKa = 10.5 VCGAPPCVIGGVGNNTLLCPTDD584 pKa = 3.81 CFRR587 pKa = 11.84 KK588 pKa = 10.09 YY589 pKa = 10.54 PEE591 pKa = 4.06 ATYY594 pKa = 10.48 SRR596 pKa = 11.84 CGSGPRR602 pKa = 11.84 ITPRR606 pKa = 11.84 CMVDD610 pKa = 2.96 YY611 pKa = 9.47 PYY613 pKa = 11.11 RR614 pKa = 11.84 LWHH617 pKa = 5.87 YY618 pKa = 9.2 PCTINYY624 pKa = 7.46 TIFKK628 pKa = 9.44 VRR630 pKa = 11.84 MYY632 pKa = 10.87 VGGVEE637 pKa = 4.23 HH638 pKa = 7.17 RR639 pKa = 11.84 LEE641 pKa = 4.47 AACNWTRR648 pKa = 11.84 GEE650 pKa = 4.08 RR651 pKa = 11.84 CDD653 pKa = 5.26 LEE655 pKa = 5.56 DD656 pKa = 4.43 RR657 pKa = 11.84 DD658 pKa = 4.2 RR659 pKa = 11.84 SEE661 pKa = 5.24 LSPLLLSTTQWQVLPCSFTTLPALSTGLIHH691 pKa = 6.97 LHH693 pKa = 5.11 QNIVDD698 pKa = 3.63 VQYY701 pKa = 11.06 LYY703 pKa = 11.42 GVGSSIASWAIKK715 pKa = 9.15 WEE717 pKa = 4.14 YY718 pKa = 10.9 VVLLFLLLADD728 pKa = 4.95 ARR730 pKa = 11.84 VCSCLWMMLLISQAEE745 pKa = 3.93 AALEE749 pKa = 3.82 NLVILNAASLAGTHH763 pKa = 6.1 GLVSFLVFFCFAWYY777 pKa = 10.26 LKK779 pKa = 10.06 GRR781 pKa = 11.84 WVPGAVYY788 pKa = 10.37 ALYY791 pKa = 10.84 GMWPLLLLLLALPQRR806 pKa = 11.84 AYY808 pKa = 10.83 ALDD811 pKa = 3.8 TEE813 pKa = 4.98 VAASCGGVVLVGLMALTLSPYY834 pKa = 8.32 YY835 pKa = 10.31 KK836 pKa = 10.1 RR837 pKa = 11.84 YY838 pKa = 10.03 ISWCMWWLQYY848 pKa = 11.18 FLTRR852 pKa = 11.84 VEE854 pKa = 4.29 AQLHH858 pKa = 4.93 VWVPPLNVRR867 pKa = 11.84 GGRR870 pKa = 11.84 DD871 pKa = 3.28 AVILLTCVVHH881 pKa = 6.24 PALVFDD887 pKa = 3.65 ITKK890 pKa = 10.55 LLLAIFGPLWILQASLLKK908 pKa = 9.99 VPYY911 pKa = 9.43 FVRR914 pKa = 11.84 VQGLLRR920 pKa = 11.84 ICALARR926 pKa = 11.84 KK927 pKa = 8.7 IAGGHH932 pKa = 4.48 YY933 pKa = 9.9 VQMAIIKK940 pKa = 10.04 LGALTGTCVYY950 pKa = 10.98 NHH952 pKa = 7.36 LAPLRR957 pKa = 11.84 DD958 pKa = 3.39 WAHH961 pKa = 5.92 NGLRR965 pKa = 11.84 DD966 pKa = 3.47 LAVAVEE972 pKa = 4.1 PVVFSRR978 pKa = 11.84 MEE980 pKa = 4.01 TKK982 pKa = 10.85 LITWGADD989 pKa = 2.86 TAACGDD995 pKa = 4.67 IINGLPVSARR1005 pKa = 11.84 RR1006 pKa = 11.84 GQEE1009 pKa = 3.59 ILLGPADD1016 pKa = 3.85 GMVSKK1021 pKa = 10.42 GWRR1024 pKa = 11.84 LLAPITAYY1032 pKa = 10.28 AQQTRR1037 pKa = 11.84 GLLGCIITSLTGRR1050 pKa = 11.84 DD1051 pKa = 3.34 KK1052 pKa = 11.42 NQVEE1056 pKa = 4.54 GEE1058 pKa = 4.27 VQIVSTATQTFLATCINGVCWTVYY1082 pKa = 10.09 HH1083 pKa = 6.4 GAGTRR1088 pKa = 11.84 TIASPKK1094 pKa = 9.79 GPVIQTYY1101 pKa = 9.49 TNVDD1105 pKa = 3.03 QDD1107 pKa = 4.21 LVGWPAPQGSRR1118 pKa = 11.84 SLTPCTCGSSDD1129 pKa = 3.64 LYY1131 pKa = 11.23 LVTRR1135 pKa = 11.84 HH1136 pKa = 6.28 ADD1138 pKa = 3.45 VIPVRR1143 pKa = 11.84 RR1144 pKa = 11.84 RR1145 pKa = 11.84 GDD1147 pKa = 3.24 SRR1149 pKa = 11.84 GSLLSPRR1156 pKa = 11.84 PISYY1160 pKa = 10.76 LKK1162 pKa = 10.52 GSSGGPLLCPTGHH1175 pKa = 6.91 AVGLFRR1181 pKa = 11.84 AAVCTRR1187 pKa = 11.84 GVAKK1191 pKa = 10.32 AVDD1194 pKa = 4.84 FIPVEE1199 pKa = 4.0 NLEE1202 pKa = 4.23 TTMRR1206 pKa = 11.84 SPVFTDD1212 pKa = 3.2 NSSPPAVPQSFQVAHH1227 pKa = 6.25 LHH1229 pKa = 6.36 APTGSGKK1236 pKa = 7.57 STKK1239 pKa = 10.21 VPAAYY1244 pKa = 9.45 AAKK1247 pKa = 9.7 GYY1249 pKa = 10.15 KK1250 pKa = 9.95 VLVLNPSVAATLGFGAYY1267 pKa = 8.02 MSKK1270 pKa = 10.38 AHH1272 pKa = 6.52 GVDD1275 pKa = 3.36 PNIRR1279 pKa = 11.84 TGVRR1283 pKa = 11.84 TITTGSPITYY1293 pKa = 8.3 STYY1296 pKa = 11.23 GKK1298 pKa = 10.11 FLADD1302 pKa = 4.15 AGCSGGAYY1310 pKa = 10.08 DD1311 pKa = 6.15 IIICDD1316 pKa = 3.74 EE1317 pKa = 4.25 CHH1319 pKa = 6.0 STDD1322 pKa = 3.09 ATSISGIGTVLDD1334 pKa = 3.65 QAEE1337 pKa = 4.26 TAGARR1342 pKa = 11.84 LVVLATATPPGSVTVSHH1359 pKa = 6.82 PNIEE1363 pKa = 4.18 EE1364 pKa = 4.2 VALSTTGEE1372 pKa = 3.72 IPFYY1376 pKa = 11.01 GKK1378 pKa = 10.47 AIPLEE1383 pKa = 4.31 VIKK1386 pKa = 10.68 GGRR1389 pKa = 11.84 HH1390 pKa = 7.03 LIFCHH1395 pKa = 6.09 SKK1397 pKa = 10.46 KK1398 pKa = 10.67 KK1399 pKa = 10.24 CDD1401 pKa = 3.38 EE1402 pKa = 4.26 LAAKK1406 pKa = 10.12 LVALGINAVAYY1417 pKa = 10.38 YY1418 pKa = 10.17 RR1419 pKa = 11.84 GLDD1422 pKa = 3.32 VSVIPTSGDD1431 pKa = 3.46 VVVVSTDD1438 pKa = 2.93 ALMTGFTGDD1447 pKa = 3.43 FDD1449 pKa = 5.59 SVIDD1453 pKa = 4.35 CNTCVTQTVDD1463 pKa = 4.01 FSLDD1467 pKa = 3.24 PTFTIEE1473 pKa = 4.28 TTTLPQDD1480 pKa = 3.32 AVSRR1484 pKa = 11.84 TQRR1487 pKa = 11.84 RR1488 pKa = 11.84 GRR1490 pKa = 11.84 TGRR1493 pKa = 11.84 GKK1495 pKa = 9.03 PGIYY1499 pKa = 9.71 RR1500 pKa = 11.84 FVAPGEE1506 pKa = 4.31 RR1507 pKa = 11.84 PSGMFDD1513 pKa = 3.15 SSVLCEE1519 pKa = 4.99 CYY1521 pKa = 10.23 DD1522 pKa = 4.46 AGCAWYY1528 pKa = 9.49 EE1529 pKa = 3.86 LTPAEE1534 pKa = 4.18 TTVRR1538 pKa = 11.84 LRR1540 pKa = 11.84 AYY1542 pKa = 9.06 MNTPGLPVCQDD1553 pKa = 3.24 HH1554 pKa = 6.85 LGFWEE1559 pKa = 5.27 GVFTGLTHH1567 pKa = 7.16 IDD1569 pKa = 3.13 AHH1571 pKa = 6.25 FLSQTKK1577 pKa = 9.84 QSGEE1581 pKa = 3.84 NFPYY1585 pKa = 10.4 LVAYY1589 pKa = 8.99 QATVCARR1596 pKa = 11.84 AQAPPPSWDD1605 pKa = 3.29 QMRR1608 pKa = 11.84 KK1609 pKa = 9.45 CLIRR1613 pKa = 11.84 LKK1615 pKa = 9.49 PTLHH1619 pKa = 6.57 GPTPLLYY1626 pKa = 10.61 RR1627 pKa = 11.84 LGAVQNEE1634 pKa = 4.33 VTLTHH1639 pKa = 7.6 PITKK1643 pKa = 10.38 YY1644 pKa = 10.98 IMTCMSADD1652 pKa = 3.78 LEE1654 pKa = 4.94 VVTSTWVLVGGVLAALAAYY1673 pKa = 9.06 CLSTGCVVIVGRR1685 pKa = 11.84 IVLSGKK1691 pKa = 9.21 PAIIPDD1697 pKa = 3.83 RR1698 pKa = 11.84 EE1699 pKa = 3.98 VLYY1702 pKa = 10.91 QEE1704 pKa = 3.92 FDD1706 pKa = 3.34 EE1707 pKa = 5.03 MEE1709 pKa = 4.51 EE1710 pKa = 4.45 CSQHH1714 pKa = 6.62 LPYY1717 pKa = 10.02 IEE1719 pKa = 3.91 QGMMLAEE1726 pKa = 4.03 QFKK1729 pKa = 10.74 QKK1731 pKa = 11.03 ALGLLQTASRR1741 pKa = 11.84 HH1742 pKa = 5.59 AEE1744 pKa = 4.06 VITPAVQTNWQKK1756 pKa = 11.64 LEE1758 pKa = 4.19 VFWAKK1763 pKa = 10.68 HH1764 pKa = 3.93 MWNFISGIQYY1774 pKa = 10.64 LAGLSTLPGNPAIASLMAFTAAVTSPLTTGQTLLFNILGGWVAAQLAAPGAATAFVGAGLAGAALDD1840 pKa = 3.89 SVGLGKK1846 pKa = 10.64 VLVDD1850 pKa = 3.24 ILAGYY1855 pKa = 8.94 GAGVAGALVAFKK1867 pKa = 10.47 IMSGEE1872 pKa = 4.18 VPSTEE1877 pKa = 4.51 DD1878 pKa = 4.52 LVNLLPAILSPGALAVGVVFASILRR1903 pKa = 11.84 RR1904 pKa = 11.84 RR1905 pKa = 11.84 VGPGEE1910 pKa = 4.82 GAVQWMNRR1918 pKa = 11.84 LIAFASRR1925 pKa = 11.84 GNHH1928 pKa = 5.24 VSPTHH1933 pKa = 5.58 YY1934 pKa = 10.73 VPEE1937 pKa = 4.92 SDD1939 pKa = 3.03 AAARR1943 pKa = 11.84 VTAILSSLTVTQLLRR1958 pKa = 11.84 RR1959 pKa = 11.84 LHH1961 pKa = 5.2 QWISSEE1967 pKa = 4.01 CTTPCSGSWLRR1978 pKa = 11.84 DD1979 pKa = 2.72 IWDD1982 pKa = 4.44 WICEE1986 pKa = 4.08 VLSDD1990 pKa = 4.42 FKK1992 pKa = 10.84 TWLKK1996 pKa = 10.72 AKK1998 pKa = 10.38 LMPQLPGIPFVSCQRR2013 pKa = 11.84 GYY2015 pKa = 10.33 RR2016 pKa = 11.84 GVWRR2020 pKa = 11.84 GDD2022 pKa = 3.27 GIMHH2026 pKa = 6.34 TRR2028 pKa = 11.84 CHH2030 pKa = 6.78 CGAEE2034 pKa = 4.16 ITGHH2038 pKa = 5.15 VKK2040 pKa = 10.42 NGTMRR2045 pKa = 11.84 IVGPRR2050 pKa = 11.84 TCKK2053 pKa = 10.73 NMWSGTFFINAYY2065 pKa = 5.29 TTGPCTPLPAPNYY2078 pKa = 10.05 KK2079 pKa = 9.79 FALWRR2084 pKa = 11.84 VSAEE2088 pKa = 3.84 EE2089 pKa = 3.76 YY2090 pKa = 10.35 VEE2092 pKa = 3.73 IRR2094 pKa = 11.84 RR2095 pKa = 11.84 VGDD2098 pKa = 3.08 FHH2100 pKa = 7.55 YY2101 pKa = 10.94 VSGMTTDD2108 pKa = 4.11 NLKK2111 pKa = 10.63 CPCQIPSPEE2120 pKa = 4.37 FFTEE2124 pKa = 3.82 LDD2126 pKa = 3.37 GVRR2129 pKa = 11.84 LHH2131 pKa = 7.21 RR2132 pKa = 11.84 FAPPCKK2138 pKa = 8.52 PLLRR2142 pKa = 11.84 EE2143 pKa = 3.9 EE2144 pKa = 4.07 VSFRR2148 pKa = 11.84 VGLHH2152 pKa = 6.38 EE2153 pKa = 4.41 YY2154 pKa = 9.9 PVGSQLPCEE2163 pKa = 4.63 PEE2165 pKa = 3.85 PDD2167 pKa = 3.85 VAVLTSMLTDD2177 pKa = 4.35 PSHH2180 pKa = 6.11 ITAEE2184 pKa = 3.99 AAGRR2188 pKa = 11.84 RR2189 pKa = 11.84 LARR2192 pKa = 11.84 GSPPSMASSSASQLSAPSLKK2212 pKa = 9.61 ATCTANHH2219 pKa = 7.33 DD2220 pKa = 4.11 SPDD2223 pKa = 3.62 AEE2225 pKa = 4.57 LIEE2228 pKa = 5.73 ANLLWRR2234 pKa = 11.84 QEE2236 pKa = 3.79 MGGNITRR2243 pKa = 11.84 VEE2245 pKa = 4.29 SEE2247 pKa = 4.21 NKK2249 pKa = 9.79 VVILDD2254 pKa = 3.76 SFDD2257 pKa = 3.91 PLVAEE2262 pKa = 3.98 EE2263 pKa = 4.72 DD2264 pKa = 3.66 EE2265 pKa = 5.33 RR2266 pKa = 11.84 EE2267 pKa = 4.07 VSVPAEE2273 pKa = 3.9 ILRR2276 pKa = 11.84 KK2277 pKa = 9.2 SRR2279 pKa = 11.84 RR2280 pKa = 11.84 FAPALPVWARR2290 pKa = 11.84 PDD2292 pKa = 3.69 YY2293 pKa = 11.17 NPLLVEE2299 pKa = 4.18 TWKK2302 pKa = 11.07 KK2303 pKa = 10.12 PDD2305 pKa = 3.4 YY2306 pKa = 9.87 EE2307 pKa = 4.22 PPVVHH2312 pKa = 6.88 GCPLPPPRR2320 pKa = 11.84 SPPVPPPRR2328 pKa = 11.84 KK2329 pKa = 9.32 KK2330 pKa = 9.26 RR2331 pKa = 11.84 TVVLTEE2337 pKa = 4.01 STLPTALAEE2346 pKa = 4.12 LATKK2350 pKa = 10.64 SFGSSSTSGITGDD2363 pKa = 3.34 NTTTSSEE2370 pKa = 4.21 PAPSGCPPDD2379 pKa = 4.46 SDD2381 pKa = 4.06 VEE2383 pKa = 4.89 SYY2385 pKa = 11.76 SSMPPLEE2392 pKa = 4.89 GEE2394 pKa = 4.49 PGDD2397 pKa = 4.71 PDD2399 pKa = 4.59 LSDD2402 pKa = 4.68 GSWSTVSSGADD2413 pKa = 3.22 TEE2415 pKa = 5.7 DD2416 pKa = 3.75 VVCCSMSYY2424 pKa = 9.74 SWTGALVTPCAAEE2437 pKa = 4.08 EE2438 pKa = 3.95 QKK2440 pKa = 11.27 LPINALSNSLLRR2452 pKa = 11.84 HH2453 pKa = 5.91 HH2454 pKa = 6.6 NLVYY2458 pKa = 10.19 STTSRR2463 pKa = 11.84 SACQRR2468 pKa = 11.84 KK2469 pKa = 9.69 KK2470 pKa = 10.74 KK2471 pKa = 9.11 VTFDD2475 pKa = 3.28 RR2476 pKa = 11.84 LQVLDD2481 pKa = 3.64 SHH2483 pKa = 6.38 YY2484 pKa = 11.03 QDD2486 pKa = 3.18 VLKK2489 pKa = 10.3 EE2490 pKa = 4.1 VKK2492 pKa = 10.12 AAASKK2497 pKa = 10.94 VKK2499 pKa = 10.82 ANLLSVEE2506 pKa = 4.58 EE2507 pKa = 4.54 ACSLAPPHH2515 pKa = 5.95 SAKK2518 pKa = 10.84 SKK2520 pKa = 9.96 FGYY2523 pKa = 8.84 GAKK2526 pKa = 10.04 DD2527 pKa = 3.57 VRR2529 pKa = 11.84 CHH2531 pKa = 5.43 ARR2533 pKa = 11.84 KK2534 pKa = 9.39 AVAHH2538 pKa = 6.62 INSVWKK2544 pKa = 10.39 DD2545 pKa = 3.56 LLEE2548 pKa = 5.19 DD2549 pKa = 3.65 SVTPIDD2555 pKa = 3.68 TTIMAKK2561 pKa = 10.35 NEE2563 pKa = 4.13 VFCVQPEE2570 pKa = 3.99 KK2571 pKa = 10.89 GGRR2574 pKa = 11.84 KK2575 pKa = 7.4 PARR2578 pKa = 11.84 LIVFPDD2584 pKa = 3.52 LGVRR2588 pKa = 11.84 VCEE2591 pKa = 4.62 KK2592 pKa = 9.4 MALYY2596 pKa = 10.52 DD2597 pKa = 3.92 VVSKK2601 pKa = 11.21 LPLAVMGSSYY2611 pKa = 10.91 GFQYY2615 pKa = 11.03 SPGQRR2620 pKa = 11.84 VEE2622 pKa = 4.48 FLVQAWKK2629 pKa = 10.61 SKK2631 pKa = 7.47 KK2632 pKa = 8.39 TPMGLSYY2639 pKa = 9.72 DD2640 pKa = 3.87 TRR2642 pKa = 11.84 CFDD2645 pKa = 3.63 STVTEE2650 pKa = 3.89 SDD2652 pKa = 2.71 IRR2654 pKa = 11.84 TEE2656 pKa = 3.75 EE2657 pKa = 5.27 AIYY2660 pKa = 9.91 QCCDD2664 pKa = 3.64 LDD2666 pKa = 3.69 PQARR2670 pKa = 11.84 VAIKK2674 pKa = 10.52 SLTEE2678 pKa = 3.57 RR2679 pKa = 11.84 LYY2681 pKa = 11.41 VGGPLTNSRR2690 pKa = 11.84 GEE2692 pKa = 3.79 NCGYY2696 pKa = 9.73 RR2697 pKa = 11.84 RR2698 pKa = 11.84 CRR2700 pKa = 11.84 ASRR2703 pKa = 11.84 VLTTSCGNTLTRR2715 pKa = 11.84 YY2716 pKa = 8.94 IKK2718 pKa = 10.68 ARR2720 pKa = 11.84 AACRR2724 pKa = 11.84 AAGLQDD2730 pKa = 3.51 CTMLVCGDD2738 pKa = 4.34 DD2739 pKa = 3.57 LVVICEE2745 pKa = 4.23 SAGVQEE2751 pKa = 4.81 DD2752 pKa = 3.9 AASLRR2757 pKa = 11.84 AFTEE2761 pKa = 3.53 AMTRR2765 pKa = 11.84 YY2766 pKa = 8.86 SAPPGDD2772 pKa = 4.37 PPQPEE2777 pKa = 4.22 YY2778 pKa = 11.02 DD2779 pKa = 3.7 LEE2781 pKa = 5.89 LITSCSSNVSVAHH2794 pKa = 6.84 DD2795 pKa = 3.78 GAGKK2799 pKa = 9.8 RR2800 pKa = 11.84 VYY2802 pKa = 10.88 YY2803 pKa = 8.66 LTRR2806 pKa = 11.84 DD2807 pKa = 3.34 PTTPLARR2814 pKa = 11.84 AAWEE2818 pKa = 4.37 TARR2821 pKa = 11.84 HH2822 pKa = 5.17 TPVNSWLGNIIMFAPTLWARR2842 pKa = 11.84 MILMTHH2848 pKa = 6.46 FFSVLIARR2856 pKa = 11.84 DD2857 pKa = 3.58 QLEE2860 pKa = 3.83 QALNCEE2866 pKa = 4.7 IYY2868 pKa = 10.02 GACYY2872 pKa = 10.27 SIEE2875 pKa = 4.28 PLDD2878 pKa = 4.68 LPPIIQRR2885 pKa = 11.84 LHH2887 pKa = 5.87 GLSAFSLHH2895 pKa = 6.68 SYY2897 pKa = 10.7 SPGEE2901 pKa = 3.99 INRR2904 pKa = 11.84 VAACLRR2910 pKa = 11.84 KK2911 pKa = 10.11 LGVPPLRR2918 pKa = 11.84 AWRR2921 pKa = 11.84 HH2922 pKa = 4.79 RR2923 pKa = 11.84 AWSVRR2928 pKa = 11.84 ARR2930 pKa = 11.84 LLARR2934 pKa = 11.84 GGKK2937 pKa = 9.39 AAICGKK2943 pKa = 10.11 YY2944 pKa = 9.84 LFNWAVRR2951 pKa = 11.84 TKK2953 pKa = 11.03 LKK2955 pKa = 9.21 LTPITAAGRR2964 pKa = 11.84 LDD2966 pKa = 3.52 LSGWFTAGYY2975 pKa = 9.49 SGGDD2979 pKa = 3.05 IYY2981 pKa = 11.16 HH2982 pKa = 6.29 SVSHH2986 pKa = 6.73 ARR2988 pKa = 11.84 PRR2990 pKa = 11.84 WFWFCLLLLAAGVGIYY3006 pKa = 10.22 LLPNRR3011 pKa = 4.87
Molecular weight: 327.15 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.555
IPC2_protein 7.717
IPC_protein 7.439
Toseland 6.971
ProMoST 8.126
Dawson 8.17
Bjellqvist 8.712
Wikipedia 8.068
Rodwell 8.2
Grimsley 7.015
Solomon 8.17
Lehninger 8.2
Nozaki 8.96
DTASelect 8.331
Thurlkill 8.375
EMBOSS 8.375
Sillero 8.756
Patrickios 3.91
IPC_peptide 8.17
IPC2_peptide 7.951
IPC2.peptide.svr19 7.93
Protein with the highest isoelectric point:
>sp|P27958|POLG_HCV77 Genome polyprotein OS=Hepatitis C virus genotype 1a (isolate H77) OX=63746 PE=1 SV=3
MM1 pKa = 7.02 STNPKK6 pKa = 8.94 PQRR9 pKa = 11.84 KK10 pKa = 8.75 KK11 pKa = 10.41 PNVTPTVAHH20 pKa = 6.1 RR21 pKa = 11.84 TSSSRR26 pKa = 11.84 VAVRR30 pKa = 11.84 SLVEE34 pKa = 4.58 FTCCRR39 pKa = 11.84 AGALDD44 pKa = 3.91 WVCARR49 pKa = 11.84 RR50 pKa = 11.84 GRR52 pKa = 11.84 LPSGRR57 pKa = 11.84 NLEE60 pKa = 4.14 VDD62 pKa = 3.43 VSLSPRR68 pKa = 11.84 HH69 pKa = 5.32 VGPRR73 pKa = 11.84 AGPGLSPGTLGPSMAMRR90 pKa = 11.84 VAGGRR95 pKa = 11.84 DD96 pKa = 4.36 GSCLPVALGLAGAPQTPGVGRR117 pKa = 11.84 AIWVRR122 pKa = 11.84 SSIPLRR128 pKa = 11.84 AASPTSWGTYY138 pKa = 8.93 RR139 pKa = 11.84 SSAPLLEE146 pKa = 4.67 ALPGPWRR153 pKa = 11.84 MASGFWKK160 pKa = 9.08 TAA162 pKa = 3.09
Molecular weight: 17.01 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.147
IPC2_protein 10.072
IPC_protein 11.564
Toseland 11.725
ProMoST 12.208
Dawson 11.725
Bjellqvist 11.711
Wikipedia 12.193
Rodwell 11.418
Grimsley 11.769
Solomon 12.208
Lehninger 12.106
Nozaki 11.725
DTASelect 11.711
Thurlkill 11.725
EMBOSS 12.223
Sillero 11.725
Patrickios 11.169
IPC_peptide 12.208
IPC2_peptide 11.199
IPC2.peptide.svr19 9.54
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2
0
2
3173
162
3011
1586.5
172.08
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
9.36 ± 0.772
3.341 ± 0.384
3.845 ± 0.879
3.719 ± 0.823
2.805 ± 0.693
8.541 ± 1.134
2.175 ± 0.415
4.129 ± 1.276
3.215 ± 0.329
10.148 ± 0.664
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.828 ± 0.283
2.868 ± 0.448
7.091 ± 1.773
2.742 ± 0.665
6.272 ± 2.134
7.28 ± 1.689
7.154 ± 0.433
8.005 ± 0.009
2.364 ± 0.319
3.12 ± 1.104
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here