Bahia Grande virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Barhavirus; Bahia barhavirus

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0D3R266|A0A0D3R266_9RHAB GDP polyribonucleotidyltransferase OS=Bahia Grande virus OX=932699 PE=4 SV=1
MM1 pKa = 7.52AAAILPVSRR10 pKa = 11.84NMPVRR15 pKa = 11.84EE16 pKa = 3.85RR17 pKa = 11.84TVAGSVTAPPVQYY30 pKa = 10.42PSTWFQAHH38 pKa = 7.22AGQKK42 pKa = 10.03VSITIYY48 pKa = 10.13QNTNARR54 pKa = 11.84QAFSRR59 pKa = 11.84ITQLRR64 pKa = 11.84NNGQWDD70 pKa = 4.05DD71 pKa = 3.77KK72 pKa = 11.49LIATFMKK79 pKa = 10.7GVLDD83 pKa = 5.18EE84 pKa = 4.2NAEE87 pKa = 4.23WFQSPPLIEE96 pKa = 4.27DD97 pKa = 4.1WIVNEE102 pKa = 3.94AVIGRR107 pKa = 11.84VDD109 pKa = 4.31DD110 pKa = 4.31VVAPTALAQWEE121 pKa = 4.42EE122 pKa = 4.26VEE124 pKa = 5.18RR125 pKa = 11.84PQNMDD130 pKa = 3.53PVPNEE135 pKa = 3.7EE136 pKa = 4.61GEE138 pKa = 4.22LGTRR142 pKa = 11.84RR143 pKa = 11.84SFFLALITIYY153 pKa = 10.51RR154 pKa = 11.84QVLTRR159 pKa = 11.84TINVDD164 pKa = 3.05YY165 pKa = 9.93GQEE168 pKa = 3.69VSRR171 pKa = 11.84RR172 pKa = 11.84IIDD175 pKa = 3.59NFKK178 pKa = 9.93EE179 pKa = 4.17QPLGMSQDD187 pKa = 4.91DD188 pKa = 3.5INEE191 pKa = 3.95IQGYY195 pKa = 6.75EE196 pKa = 4.03SKK198 pKa = 10.88EE199 pKa = 3.91RR200 pKa = 11.84LTTNYY205 pKa = 9.99VKK207 pKa = 10.35ILCILDD213 pKa = 3.17MFFNKK218 pKa = 9.61FQTHH222 pKa = 6.87DD223 pKa = 3.18KK224 pKa = 8.98STIRR228 pKa = 11.84IATLPTRR235 pKa = 11.84YY236 pKa = 9.38RR237 pKa = 11.84GCAAFTSYY245 pKa = 11.65GEE247 pKa = 3.81LAIRR251 pKa = 11.84LGIEE255 pKa = 4.31PIKK258 pKa = 10.67LPSLILTVAVAKK270 pKa = 10.81DD271 pKa = 3.39FDD273 pKa = 4.72KK274 pKa = 11.34INVNGEE280 pKa = 3.64QAEE283 pKa = 4.12QLDD286 pKa = 4.81GYY288 pKa = 10.81FPYY291 pKa = 10.44QLEE294 pKa = 4.24LGLVKK299 pKa = 10.45KK300 pKa = 10.36SAYY303 pKa = 9.96SAGNCPSLYY312 pKa = 10.7LWMHH316 pKa = 6.72TIGTMLHH323 pKa = 4.69QQRR326 pKa = 11.84SYY328 pKa = 10.61RR329 pKa = 11.84ANVPKK334 pKa = 10.53NVPDD338 pKa = 3.35QMGTINSAIAVAMQFVAGGEE358 pKa = 3.93FSMQFVGDD366 pKa = 3.84ARR368 pKa = 11.84VQEE371 pKa = 4.75AMRR374 pKa = 11.84EE375 pKa = 4.18MQTAEE380 pKa = 4.04AEE382 pKa = 4.25LNEE385 pKa = 4.27LRR387 pKa = 11.84MAQARR392 pKa = 11.84EE393 pKa = 3.63MRR395 pKa = 11.84AAARR399 pKa = 11.84GDD401 pKa = 3.39EE402 pKa = 4.29DD403 pKa = 4.77EE404 pKa = 5.13EE405 pKa = 4.97GSEE408 pKa = 5.74DD409 pKa = 5.13GLDD412 pKa = 4.16DD413 pKa = 4.55EE414 pKa = 5.8NDD416 pKa = 3.99GEE418 pKa = 5.46GDD420 pKa = 3.81DD421 pKa = 4.47EE422 pKa = 5.01LPAEE426 pKa = 4.4IEE428 pKa = 4.18QNPEE432 pKa = 3.23YY433 pKa = 10.57LNRR436 pKa = 11.84VNRR439 pKa = 11.84IRR441 pKa = 11.84EE442 pKa = 4.15LQEE445 pKa = 4.33NLQQYY450 pKa = 8.86NATVQQHH457 pKa = 4.58TNAVEE462 pKa = 4.03KK463 pKa = 10.67AALRR467 pKa = 11.84ALAYY471 pKa = 9.99LQEE474 pKa = 4.51NGGIADD480 pKa = 3.62KK481 pKa = 10.89DD482 pKa = 3.71KK483 pKa = 11.09RR484 pKa = 11.84DD485 pKa = 3.23LGIRR489 pKa = 11.84FRR491 pKa = 11.84RR492 pKa = 11.84FADD495 pKa = 3.51EE496 pKa = 4.09AEE498 pKa = 4.09GRR500 pKa = 11.84VGKK503 pKa = 10.23LLASLFPAPRR513 pKa = 4.8

Molecular weight: 57.85 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0D3R273|A0A0D3R273_9RHAB Uncharacterized protein OS=Bahia Grande virus OX=932699 PE=4 SV=1
MM1 pKa = 7.55PQHH4 pKa = 5.57QTLSQDD10 pKa = 3.63PPQQPIVFSTVKK22 pKa = 9.99KK23 pKa = 9.51VGYY26 pKa = 9.65IILFSIPLIVIIVFFVLLDD45 pKa = 3.89RR46 pKa = 11.84KK47 pKa = 9.28HH48 pKa = 6.35LKK50 pKa = 10.22YY51 pKa = 10.48IPLKK55 pKa = 10.35AWNTSIITIKK65 pKa = 10.48EE66 pKa = 3.92PYY68 pKa = 9.35

Molecular weight: 7.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3920

68

2175

653.3

75.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.49 ± 0.929

1.327 ± 0.318

5.689 ± 0.173

7.781 ± 0.349

4.362 ± 0.355

5.51 ± 0.295

2.143 ± 0.221

7.628 ± 0.356

7.526 ± 0.955

9.464 ± 0.767

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.372 ± 0.104

5.638 ± 0.314

4.056 ± 0.382

3.546 ± 0.675

5.051 ± 0.505

6.964 ± 0.489

5.791 ± 0.168

5.23 ± 0.288

1.48 ± 0.289

3.954 ± 0.414
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski